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2019 年度 実施状況報告書

Development of Sulfo-Sialic Acids into Next-Generation Antimicrobial Agents

研究課題

研究課題/領域番号 18K06577
研究機関神戸大学

研究代表者

ヴァヴリッカ クリストファー  神戸大学, 科学技術イノベーション研究科, 准教授 (20809199)

研究分担者 清田 洋正  岡山大学, 環境生命科学研究科, 教授 (30234397)
研究期間 (年度) 2018-04-01 – 2021-03-31
キーワードBioproduction / Anti-virals / Sialic acid / Synthetic biology / Sulfonic acids / Fluorine
研究実績の概要

To speed up production of the medicinal chemistry targets, microbial systems to bioproduce target compounds were developed. Concepts for designing, building, testing and improving bioproduction systems were proven using alkaloid targets in a model study. The model alkaloid pathway is similar to our proposed sialic acid derivative synthesis in that decarboxylation is a key step, and also regarding key aldehyde intermediates. Therefore new aldehyde containing routes to the proposed sialic acid derivatives were explored using successful model reactions. Finally, a microbial system for 9-O-acetyl-sialic acid bioproduction was constructed. 9-O-acetylsialic acid is a potential probe or inhibitor of coronavirus, as well as a key intermediate of our proposed sialic acid derivatives.

現在までの達成度 (区分)
現在までの達成度 (区分)

2: おおむね順調に進展している

理由

Regarding the original plan to produce fluorinated sialic acid derivatives as inhibitors of influenza, we have made progress in the introduction of fluroine into the C-1 position of open-chain analogs of our proposed compounds. In one model reaction, fluoromethy phenyl sulfone could undergo addition to a model aldehyde. In addition, we have made great progress in the development of next-generation methods for the production of valuable medicinal compounds. These synthetic biology methods for carrying out related reactions have already resulted in several high impact publications. Therefore we are confident that these new processes will continue to produce valuable targets relating to the proposed study.

今後の研究の推進方策

We will continue to focus on two approaches to further develop our proposed fluorinated sialic acid analogs:
1) Production of open-chain analogs of fluorinated sialic acids. This will include an 8 carbon aldonic acid derived from oxidation of sialic acid. The open-chain analogs will be tested as inhibitors of influenza neuraminidase. Re-cyclization of the open-chain analogs may also be tested.

2) Microbial bioproduction of key intermediates using aldolase and O-acetyltransferase enzymes. Improvement of enzyme sequences will be carried out using protein structure modeling. In vivo production of target compounds will be tested in Escherichia coli. Comparison of the metabolism of fluorine labeled compounds vs natural compounds will be investigated.

次年度使用額が生じた理由

Some of the ordered reagents and supplies were unable to be delivered by March. But these orders were able to be received in April. The research will be able to proceed without any problem.

  • 研究成果

    (7件)

すべて 2020 2019

すべて 雑誌論文 (4件) (うち査読あり 2件) 学会発表 (3件)

  • [雑誌論文] Towards Improvement of Covalent Neuraminidase Inhibitors with Anomeric Substitution2020

    • 著者名/発表者名
      Vavricka Christopher J.、Matsumoto Tatsuma、Kiyota Hiromasa
    • 雑誌名

      Trends in Glycoscience and Glycotechnology

      巻: 32 ページ: E1~E5

    • DOI

      10.4052/tigg.1801.1E

  • [雑誌論文] Dynamic Metabolomics for Engineering Biology: Accelerating Learning Cycles for Bioproduction2020

    • 著者名/発表者名
      Vavricka Christopher J.、Hasunuma Tomohisa、Kondo Akihiko
    • 雑誌名

      Trends in Biotechnology

      巻: 38 ページ: 68~82

    • DOI

      10.1016/j.tibtech.2019.07.009

  • [雑誌論文] Single-Stage Astaxanthin Production Enhances the Nonmevalonate Pathway and Photosynthetic Central Metabolism in Synechococcus sp. PCC 70022019

    • 著者名/発表者名
      Tomohisa Hasunuma, Ayako Takaki, Mami Matsuda, Yuichi Kato, Christopher J. Vavricka, Akihiko Kondo
    • 雑誌名

      ACS Synthetic Biology

      巻: 8 ページ: 2701-2709

    • DOI

      https://doi.org/10.1021/acssynbio.9b00280

    • 査読あり
  • [雑誌論文] Mechanism-based tuning of insect 3,4-dihydroxyphenylacetaldehyde synthase for synthetic bioproduction of benzylisoquinoline alkaloids2019

    • 著者名/発表者名
      Christopher J. Vavricka, Takanobu Yoshida, Yuki Kuriya, Shunsuke Takahashi, Teppei Ogawa, Fumie Ono, Kazuko Agari, Hiromasa Kiyota, Jianyong Li, Jun Ishii, Kenji Tsuge, Hiromichi Minami, Michihiro Araki, Tomohisa Hasunuma, Akihiko Kondo
    • 雑誌名

      Nature Communications

      巻: 10 ページ: 2015

    • DOI

      https://doi.org/10.1038/s41467-019-09610-2

    • 査読あり
  • [学会発表] Genome-scale prediction of gene ontology from yeast knockout MASS fingerprints2019

    • 著者名/発表者名
      VAVRICKA, CHRISTOPHER JOHN
    • 学会等名
      Frontiers in Genome Engineering 2019
  • [学会発表] Application of the design, build, test and learn paradigm to the discovery and engineering of specialized aromatic aldehyde synthases2019

    • 著者名/発表者名
      VAVRICKA, CHRISTOPHER JOHN, 清田洋正, 荒木通啓, 近藤昭彦, 蓮沼誠久
    • 学会等名
      The 37th Symposium on Environmental Science of Pesticide
  • [学会発表] Re-design, synthesis, and bio-analysis of sulfosialic acids as covalent inhibitors of neuraminidase2019

    • 著者名/発表者名
      VAVRICKA, CHRISTOPHER JOHN, 松本 達磨, 荒木 通啓, 蓮沼 誠久, 泉 実, 清田 洋正
    • 学会等名
      第61回天然有機化合物討論会 2019年9月

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公開日: 2021-01-27  

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