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2021 年度 実施状況報告書

Computer modeling of cardiac conduction system for arrhythmia research and implantable device testing

研究課題

研究課題/領域番号 20K12046
研究機関会津大学

研究代表者

Maxim・V Ryzhii  会津大学, コンピュータ理工学部, 上級准教授 (50254082)

研究期間 (年度) 2020-04-01 – 2023-03-31
キーワードCorrado-Niederer / Aliev-Panfilov / "natural pacemaker" / "nonlinear equation" / "dual pathway" / "cardiac model" / intestine / "sinoatrial node"
研究実績の概要

1. We performed basic bifurcation analysis of complex ion-channel and simplified cardiac pacemaker models available in the CellML Model Repository and compared their responses. The observed bifurcation behavior demonstrated pronounced differences among the models. Only a few of the models exhibited Hodgkin-Huxley-like general dynamics. We concluded that a suitable pacemaker cell model should be able to operate in a wide range of applied external currents, which can guarantee their sustained self-oscillations in different modeling situations. These results were presented online and published in the conference proceedings.

2. We developed oscillating variants Aliev-Panfilov (AP) and Corrado-Niederer (CN) two-variable excitable cardiac cell models.
We conducted a numerical simulation study of these models and investigated the nonlinear dynamic features. We also developed computer models of the 2D sinoatrial node (2D SAN) with exit pathways and 3D intestine tissue. We calculated activation sequences for the SAN model variants with and without exit pathways. In the 3D intestine simulations, we observed slow waves in interstitial cells of Cajal traveled distally along the small intestine, formations of plateaus with constant frequency, and initiation of dysrhythmia due to temporary conduction block. Our obtained results are similar to clinical, experimental, and simulation data.
The developed software in MATLAB and CellML was published in GitHub open source repository. A research paper was published on BioRxiv preprint site and is in press (published in a journal in April 2022).

現在までの達成度 (区分)
現在までの達成度 (区分)

3: やや遅れている

理由

We developed pacemaking variants of two-variable excitable cardiac cell models (Aliev-Panfilov and Corrado-Niederer models) which can replace FitzHugh-Nagumo equations in different modeling situations. The complex functional atrioventricular node model for rabbit heart including the dual pathway based on the developed pacemaking Aliev-Panfilov model is under construction.

今後の研究の推進方策

We will finish the development of the functional atrioventricular node (AVN) model for rabbit heart on the base of Aliev-Panfilov model,
able to reproduce almost all physiological functions and features of the AVN. Pertinent MATLAB software is under development.
We will propose an improved version of Mitchell-Schaeffer excitable and pacemaking models, and compare its nonlionear features with the Corrado-Niederer model. The improved model is expected to be used in the cardiac conduction system model of human heart. With these studies, we will continue creating simple quasi-3D models for cardiac muscles able to produce adequately full 12 lead ECG signals.

次年度使用額が生じた理由

Due to COVID19 situation, travel to international conferences was prohibited and purchase of some project-related items was restricted. We are going to spent the incurring amount for open publications of research papers and conference fees, in particular.

  • 研究成果

    (5件)

すべて 2021 その他

すべて 雑誌論文 (2件) (うち国際共著 2件、 査読あり 1件、 オープンアクセス 1件) 学会発表 (1件) (うち国際学会 1件、 招待講演 1件) 備考 (2件)

  • [雑誌論文] Comparison of Responses of Ion-Channel and Simplified Pacemaker Cell Models on External Stimulation2021

    • 著者名/発表者名
      M. Ryzhii and E. Ryzhii
    • 雑誌名

      Proceedings - 2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021

      巻: 176400 ページ: 2855 - 2861

    • DOI

      10.1109/BIBM52615.2021.9669353

    • 査読あり / 国際共著
  • [雑誌論文] Pacemaking function of two simplified cell models2021

    • 著者名/発表者名
      M. Ryzhii and E. Ryzhii
    • 雑誌名

      BioRxiv preprint server

      巻: online ページ: online

    • DOI

      10.1101/2021.09.14.460406

    • オープンアクセス / 国際共著
  • [学会発表] Comparison of Responses of Ion-Channel and Simplified Pacemaker Cell Models on External Stimulation2021

    • 著者名/発表者名
      M. Ryzhii
    • 学会等名
      2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021
    • 国際学会 / 招待講演
  • [備考] Video presented at IEEE BIBM 2021 Conference

    • URL

      https://u-aizu.ac.jp/labs/cs-csm/mr/video/BIBM2021_presentation.mp4

  • [備考] MATLAB and CellML codes for models at GitHub

    • URL

      https://github.com/mryzhii/Simplified-pacemaker-cell-models

URL: 

公開日: 2022-12-28  

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