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2021 年度 実績報告書

Co-evolution of epidemics, interventions, and behavior in network epidemiology

研究課題

研究課題/領域番号 21H04595
研究機関神戸大学

研究代表者

Holme Petter  神戸大学, 計算社会科学研究センター, リサーチフェロー (50802352)

研究分担者 高安 美佐子  東京工業大学, 科学技術創成研究院, 教授 (20296776)
井深 陽子  慶應義塾大学, 経済学部(三田), 教授 (20612279)
増田 直紀  早稲田大学, 理工学術院, 教授(任期付) (40415295)
浅井 雄介  国立研究開発法人国立国際医療研究センター, 国際感染症センター, 研究員 (70779991)
Beauchemin Catherine  国立研究開発法人理化学研究所, 数理創造プログラム, 副プログラムディレクター (70898931)
村田 剛志  東京工業大学, 情報理工学院, 教授 (90242289)
研究期間 (年度) 2021-04-05 – 2025-03-31
キーワードNetwork epidemiology / Network science / Theoretical epidemiology / Game theory / Behavioral modeling
研究実績の概要

FY2021 saw many advancements toward the objectives of the program. The PI published works about the co-evolution of sentiments, behavior, and disease spreading using social media data and a seminal study of Chinese mobility in the first year of Covid-19. Another work by the PI concerned how to represent contact data more efficiently for network epidemiology. Co-I Masuda contributed to several theoretical studies of disease spreading and how to analyze epidemic data. Co-I Ibuka had several publications about Covid-19 in Japan, and its social implications, including a seminal article about movement patterns during the Olympic games. The latter paper was co-authored by co-I Asai, who also co-authored a great number of reports about Covid-19 in Japan. Co-I Beauchemin published work on in-host viral dynamics. Co-I Takayasu published theoretical works on spreading dynamics and data science papers about opinion dynamics.

現在までの達成度 (区分)
現在までの達成度 (区分)

2: おおむね順調に進展している

理由

Our work is continuing along the lines of the proposal. Since Covid-19 has become a real-life laboratory for many of the research ideas of the proposal, some of the work has been changed to follow these developments. For example, Co-I Asai has been heavily involved in monitoring the impact of Covid-19 on Japanese healthcare. Data-driven studies of the Covid-10 epidemics have replaced some of the original plan's emphasis on theoretical and computational modeling, but on the whole, we are covering the research initially anticipated.

今後の研究の推進方策

In the future, we aim to extend the scope of our project and delve deeper into the co-evolution of awareness and epidemics, as informed by data. This year, we plan to continue working with Covid-19 data to improve to match reality better. We will refine our network epidemiological vaccination models based on the new data by incorporating experimental game theory. Specifically, we will continue our work on models of various health decisions using game theory and their impact using network epidemiology. We will also explore vaccination games on networks to develop more realistic models. To achieve this, we will simulate different scenarios and identify optimal vaccination strategies using our previously developed model.
Prof. Holme and his team will continue to lead the core analysis, including calibrating our models and integrating results from the different work packages. In parallel to these efforts, we will focus on unifying the outcomes from the work packages to build a comprehensive network-epidemiological theory of the co-evolution of epidemics and behavior.
Additionally, we will explore the impact of different intervention strategies on the spread of epidemics. We will investigate the efficacy of contact tracing, quarantine, and vaccination in reducing the transmission of infectious diseases.
Finally, we aim to provide policymakers with actionable insights and recommendations for designing effective intervention strategies to curb the spread of infectious diseases.

  • 研究成果

    (43件)

すべて 2022 2021 その他

すべて 国際共同研究 (4件) 雑誌論文 (27件) (うち国際共著 17件、 査読あり 26件、 オープンアクセス 25件) 学会発表 (12件) (うち国際学会 10件、 招待講演 6件)

  • [国際共同研究] The Catholic University of Korea(韓国)

    • 国名
      韓国
    • 外国機関名
      The Catholic University of Korea
  • [国際共同研究] La Trobe University(オーストラリア)

    • 国名
      オーストラリア
    • 外国機関名
      La Trobe University
  • [国際共同研究] University of California, Los Angeles(米国)

    • 国名
      米国
    • 外国機関名
      University of California, Los Angeles
  • [国際共同研究] University of Oxford(英国)

    • 国名
      英国
    • 外国機関名
      University of Oxford
  • [雑誌論文] The microdynamics shaping the relation between democracy and corruption2022

    • 著者名/発表者名
      Boris Podobnik, Marko Jusup, Dean Koro?ak, Petter Holme and Tomislav Lipi?
    • 雑誌名

      Proc. R. Soc. A

      巻: 478 ページ: 20210567

    • DOI

      10.1098/rspa.2021.0567

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Optimal control of networked reaction-diffusion systems2022

    • 著者名/発表者名
      Shupeng Gao, Lili Chang, Ivan Romic, Zhen Wang, Marko Jusup,Petter Holme
    • 雑誌名

      Journal of the Royal Society Interface

      巻: 18 ページ: 20210739

    • DOI

      10.1098/rsif.2021.0739

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] "Classification of endogenous and exogenous bursts in collective emotions based on Weibo comments during COVID-19"2022

    • 著者名/発表者名
      Qianyun Wu, Yukie Sano, Hideki Takayasu ,Misako Takayasu
    • 雑誌名

      Scientific Reports ,12, Article number: 3120 (17 pages) (2022)

      巻: 12, 3120 ページ: -

    • DOI

      10.1038/s41598-022-07067-w

    • 査読あり / オープンアクセス
  • [雑誌論文] Epidemic dynamics on metapopulation networks with node2vec mobility2022

    • 著者名/発表者名
      Lingqi Meng, Naoki Masuda
    • 雑誌名

      Journal of Theoretical Biology

      巻: 534 ページ: 110960

    • DOI

      10.1016/j.jtbi.2021.110960

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] The global migration network of sex-workers2022

    • 著者名/発表者名
      Luis E. C. Rocha, Petter Holme, Claudio D. G. Linhares
    • 雑誌名

      Journal of Computational Social Science

      巻: 5 ページ: 969-985

    • DOI

      10.1007/s42001-021-00156-2

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Network structure and community evolution online: Behavioral and emotional changes in response to COVID-192022

    • 著者名/発表者名
      Fan Fang, Tong Wang, Suoyi Tan, Saran Chen, Tao Zhou, Wei Zhang, Qiang Guo, Jianguo Liu, Petter Holme, Xin Lu
    • 雑誌名

      Frontiers in Public Health

      巻: 9 ページ: 2274

    • DOI

      10.3389/fpubh.2021.813234

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Comorbidities as risk factors for severe disease in hospitalized elderly COVID-19 patients by different age-groups in Japan2022

    • 著者名/発表者名
      Yusuke Asai, Hidetoshi Nomoto, Kayoko Hayakawa, Nobuaki Matsunaga, Shinya Tsuzuki, Mari Terada, Hiroshi Ohtsu, Koji Kitajima, Kumiko Suzuki, Tetsuya Suzuki, Keiji Nakamura, Shinichiro Morioka, Sho Saito, Fumitake Saito, Norio Ohmagari
    • 雑誌名

      Gerontology

      巻: 68 ページ: 1027-1037

    • DOI

      10.1159/000521000

    • 査読あり / オープンアクセス
  • [雑誌論文] OD analysis of Hanshin expressway ETC statistics2022

    • 著者名/発表者名
      Daigo Umemoto; Takashi Kamihigashi,
    • 雑誌名

      AROB 27th 2022

      巻: - ページ: -

    • 査読あり
  • [雑誌論文] Mixing age and risk groups for accessing COVID-19 vaccines: a modelling study2022

    • 著者名/発表者名
      Hongming Wang, Yoko Ibuka, Ryota Nakamura
    • 雑誌名

      BMJ Open

      巻: 12 ページ: 1-10

    • DOI

      10.1136/bmjopen-2022-061139

    • 査読あり / オープンアクセス
  • [雑誌論文] Randomizing hypergraphs preserving degree correlation and local clustering2022

    • 著者名/発表者名
      Kazuki Nakajima, Kazuyuki Shudo, Naoki Masuda
    • 雑誌名

      IEEE Transactions on Network Science and Engineering

      巻: 9 ページ: 1139-1153

    • DOI

      10.1109/TNSE.2021.3133380

    • 査読あり / オープンアクセス
  • [雑誌論文] Social Physics2021

    • 著者名/発表者名
      Marko Jusup, Petter Holme, Kiyoshi Kanazawa, Misako Takayasu, Ivan Romic, Zhen Wang, Suncana Gecek, Tomislav Lipic, Boris Podobnik, Lin Wang, Wei Luo, Tin Klanjscek, Jingfang Fan, Stefano Boccaletti, Matjaz Perc
    • 雑誌名

      Physics Reports

      巻: 948 ページ: 1-148

    • DOI

      10.1016/j.physrep.2021.10.005

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Clinical characteristics of hospitalized COVID-19 in children: Report from the COVID-19 registry in Japan2021

    • 著者名/発表者名
      Kensuke Shoji, Takayuki Akiyama, Shinya Tsuzuki, Nobuaki Matsunaga, Yusuke Asai, Setsuko Suzuki, Noriko Iwamoto, Takanori Funaki, Norio Ohmagari
    • 雑誌名

      Journal of the Pediatric Infectious Diseases Society

      巻: 10 ページ: 1097-1100

    • DOI

      10.1093/jpids/piab085

    • 査読あり / オープンアクセス
  • [雑誌論文] Autopoietic influence hierarchies in pancreatic β-cells2021

    • 著者名/発表者名
      Dean Korosak, Marko Jusup, Boris Podobnik, Andraz Stozer, Jurij Dolensek, Petter Holme, Marjan Slak Rupnik
    • 雑誌名

      Physical Review Letters

      巻: 127 ページ: 168101

    • DOI

      10.1103/PhysRevLett.127.168101

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Graph Neural Networks for Fast Node Ranking Approximation2021

    • 著者名/発表者名
      Sunil Maurya, Liu Xin, Tsuyoshi Murata
    • 雑誌名

      ACM Transactions on Knowledge Discovery from Data

      巻: 15 ページ: 1-32

    • DOI

      10.1145/3446217

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] "Universal scaling of human flow remain unchanged during the COVID-19 pandemic"2021

    • 著者名/発表者名
      Yohei Shida, Hideki Takayasu, Shlomo Havlin and Misako Takayasu
    • 雑誌名

      Applied Network Science 6 ,Article number:75 (13 pages) (2021)

      巻: 6, 75 ページ: -

    • DOI

      10.1007/s41109-021-00416-0

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] COVID-19 and Networks2021

    • 著者名/発表者名
      Tsuyoshi Murata
    • 雑誌名

      New Generation Computing

      巻: 39 ページ: 469-481

    • DOI

      10.1007/s00354-021-00134-2

    • 査読あり / オープンアクセス
  • [雑誌論文] Projected graph relation-feature attention network for heterogeneous information network embedding2021

    • 著者名/発表者名
      Nuttapong Chairatanakul, Xin Liu, Tsuyoshi Murata
    • 雑誌名

      Information Sciences

      巻: 570 ページ: 769-794

    • DOI

      10.1016/j.ins.2021.04.070

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Mobility in China, 2020: a tale of four phases2021

    • 著者名/発表者名
      Suoyi Tan, Shengjie Lai, Fan Fang, Ziqiang Cao, Bin Sai, Bing Song, Bitao Dai, Shuhui Guo, Chuchu Liu, Mengsi Cai, Tong Wang, Mengning Wang, Jiaxu Li, Saran Chen, Shuo Qin, Jessica R Floyd, Zhidong Cao, Jing Tan, Xin Sun, Tao Zhou, Wei Zhang, Andrew J Tatem, Petter Holme, Xiaohong Chen, Xin Lu
    • 雑誌名

      National Science Review

      巻: 8 ページ: -

    • DOI

      10.1093/nsr/nwab148

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Predicting respiratory failure for COVID-19 patients in Japan: a simple clinical score for evaluating the need for hospitalisation2021

    • 著者名/発表者名
      Gen Yamada, Kayoko Hayakawa, Nobuaki Matsunaga, Mari Terada, Setsuko Suzuki, Yusuke Asai, Hiroshi Ohtsu, Ako Toyoda, Koji Kitajima, Shiya Tsuzuki, Sho Saito, Norio Ohmagari
    • 雑誌名

      Epidemiology and Infection

      巻: 30 ページ: 1-9

    • DOI

      10.1017/S0950268821001837

    • 査読あり / オープンアクセス
  • [雑誌論文] Finite-size effects on the convergence time in continuous-opinion dynamics2021

    • 著者名/発表者名
      Hang-Hyun Jo, Naoki Masuda
    • 雑誌名

      Physical Review E

      巻: 104 ページ: 14309

    • DOI

      10.1103/PhysRevE.104.014309

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Guest Editorial Introduction to the Special Section on Reloading Feature-Rich Information Networks2021

    • 著者名/発表者名
      Andrea Tagarelli, Sabrina Gaito, Roberto Interdonato, Tsuyoshi Murata, Alessandra Sala, My T. Thai
    • 雑誌名

      IEEE Transactions on Network Science and Engineering

      巻: 8 ページ: 1256-1258

    • DOI

      10.1109/TNSE.2021.3073824

    • オープンアクセス / 国際共著
  • [雑誌論文] External validation and update of prediction models for unfavorable outcomes in hospitalized patients with COVID-19 in Japan2021

    • 著者名/発表者名
      Gen Yamada, Kayoko Hayakawa, Yusuke Asai, Nobuaki Matsunaga, Hiroshi Ohtsu, Masayuki Hojo, Masao Hashimoto, Kentaro Kobayashi, Ryo Sasaki, Tatsuya Okamoto, Yasuaki Yanagawa, Daisuke Katagiri, Mari Terada, Michiyo Suzuki, Lubna Sato, Yusuke Miyazato, Masahiro Ishikane, Shinichiro Morioka, Sho Saito, Norio Ohmagari
    • 雑誌名

      Journal of Infection and Chemotherapy

      巻: 27 ページ: 1043-1050

    • DOI

      10.1016/j.jiac.2021.04.008

    • 査読あり / オープンアクセス
  • [雑誌論文] Opinion dynamics on tie-decay networks2021

    • 著者名/発表者名
      Kashin Sugishita, Mason A. Porter, Mariano Beguerisse-Diaz, Naoki Masuda
    • 雑誌名

      Physical Review Research

      巻: 3 ページ: 23249

    • DOI

      10.1103/PhysRevResearch.3.023249

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Concurrency measures in the era of temporal network epidemiology: A review2021

    • 著者名/発表者名
      Naoki Masuda, Joel C. Miller, Petter Holme
    • 雑誌名

      Journal of the Royal Society Interface

      巻: 18 ページ: 20210019

    • DOI

      10.1098/rsif.2021.0019

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Building surrogate temporal network data from observed backbones2021

    • 著者名/発表者名
      Charley Presigny, Petter Holme, Alain Barrat
    • 雑誌名

      Physical Review E

      巻: 103 ページ: 52304

    • DOI

      10.1103/PhysRevE.103.052304

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] Graph Convolutional Networks for Graphs Containing Missing Features2021

    • 著者名/発表者名
      Hibiki Taguchi, Liu Xin, Tsuyoshi Murata
    • 雑誌名

      Future Generation Computer Systems

      巻: 117 ページ: 155-168

    • DOI

      10.1016/j.future.2020.11.016

    • 査読あり / オープンアクセス / 国際共著
  • [雑誌論文] 阪神高速 ETC 統計データの時間的規則性2021

    • 著者名/発表者名
      楳本大悟, 上東貴志
    • 雑誌名

      第27回交通流と自己駆動粒子系のシンポジウム 論文集

      巻: - ページ: -

    • 査読あり
  • [学会発表] Isolating and quantifying the efficacy of virus replication steps2022

    • 著者名/発表者名
      Catherine Beauchemin
    • 学会等名
      Multiscale modelling and viral pandemic working group virtual seminars(on zoom)
    • 国際学会 / 招待講演
  • [学会発表] A primer in virophysics2022

    • 著者名/発表者名
      Catherine Beauchemin
    • 学会等名
      Simon Fraser University Physics seminars (on zoom)
    • 国際学会 / 招待講演
  • [学会発表] Basics of virophysics from cell cultures to humans2022

    • 著者名/発表者名
      Catherine Beauchemin
    • 学会等名
      Canadian Within-Host Modelling Seminar Series (on zoom)
    • 国際学会 / 招待講演
  • [学会発表] System-state dynamics and recurrence of temporal networks2022

    • 著者名/発表者名
      Naoki Masuda
    • 学会等名
      American Physical Society March Meeting
    • 国際学会 / 招待講演
  • [学会発表] A state-dynamics view of bursts in contact networks, with applications to epidemic processes and metapopulation models2022

    • 著者名/発表者名
      Naoki Masuda
    • 学会等名
      American Mathematical Society Spring Eastern Virtual Sectional Meeting
    • 国際学会
  • [学会発表] Cross-lingual Transfer for Text Classification with Dictionary-based Heterogeneous Graph2021

    • 著者名/発表者名
      Nuttapong Chairatanakul, Noppayut Sriwatanasakdi, Nontawat Charoenphakdee, Xin Liu, Tsuyoshi Murata
    • 学会等名
      Findings of the Association for Computational Linguistics (EMNLP 2021)
    • 国際学会
  • [学会発表] Balanced Softmax Cross-Entropy for Incremental Learning2021

    • 著者名/発表者名
      Jodelet Quentin Magic, Xin Liu, Tsuyoshi Murata
    • 学会等名
      The 30th International Conference on Artificial Neural Networks (ICANN 2021)
    • 国際学会
  • [学会発表] Networks, Deep Learning and COVID-192021

    • 著者名/発表者名
      Tsuyoshi Murata
    • 学会等名
      International Conference on Data Science and Official Statistics (ICDSOS 2021)
    • 国際学会 / 招待講演
  • [学会発表] Dynamics of SEIR model in random environment2021

    • 著者名/発表者名
      Yusuke Asai
    • 学会等名
      Biomath 2021
    • 国際学会
  • [学会発表] 数理モデルを用いた検査・隔離の最適化2021

    • 著者名/発表者名
      浅井雄介
    • 学会等名
      生命科学における数理解析探究ワークショップ
  • [学会発表] Respiratory viral infection model: is an equation worth a thousand pictures?2021

    • 著者名/発表者名
      Christian Quirouette, Nada P. Younis, Micaela B. Reddy, Catherine Beauchemin(発表者 via zoom)
    • 学会等名
      44th Annual Meeting of the Molecular Biology Society of Japan (MBSJ) (hybrid - zoom+in person)
    • 国際学会 / 招待講演
  • [学会発表] ポストコロナ社会における政策決定2021

    • 著者名/発表者名
      上東貴志
    • 学会等名
      第12回横幹連合コンファレンス

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公開日: 2023-12-25  

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