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2021 年度 実施状況報告書

Development of artificial intelligence assisted Raman microscopy for reliable and automated examination of urine sediment

研究課題

研究課題/領域番号 21K18081
研究機関島根大学

研究代表者

H Noothalapati  島根大学, 学術研究院農生命科学系, 助教 (30748025)

研究期間 (年度) 2021-04-01 – 2023-03-31
キーワードRaman spectroscopy / Urinalysis / Urine sediment analysis / Artificial intelligence / disease diagnosis / machine learning / MCR-ALS / multivariate analysis
研究実績の概要

Urine sediment microscopy is vital in accurate diagnosis of kidney and urinary tract diseases. However, it is not universally adopted because it expensive, time consuming and required trained personnel. So, we plan to develop artificial intelligence (AI) assisted Raman microscopy for reliable and automated examination of urine sediment. We prepared artificial urine and measured Raman spectra of various components in urine successfully. We then employed multivariate analyses such as principal component analysis (PCA) to differentiate multiple components but it does not provide detailed molecular information. Therefore we further employed multivariate curve resolution analysis (MCR) to extract pure molecular spectra which helped to identify markers for objectively diagnosis.

現在までの達成度 (区分)
現在までの達成度 (区分)

1: 当初の計画以上に進展している

理由

Application of multivariate curve resolution analysis to differentiate various cell types as proposed in the application has been successfully tested and the results have already been published as an original peer-reviewed article. Further to expand the ongoing research, we extensively reviewed literature on diagnostic potential of Raman spectroscopy for various diseases especially by liquid biopsy approaches and its advantages of combining microfluidics device for accurate and automated measurements. Our works have been published as two peer-reviewed critical review articles.

今後の研究の推進方策

We plan to measure many cell types in urine sediment this year and accumulate Raman hyperspectral big data. Markers obtained from MCR analysis will be used to build artificial intelligence models for reliable and automated examination of urine. With such encouraging results, we would like to acquire and test the proposed hypothesis in real urine samples. To this end, we plan to initiate an international collaboration with researchers in Advanced Center for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Center, Mumbai, India to measure Raman spectra of clinical urine samples.

次年度使用額が生じた理由

Delivery of the planned purchase has been delayed due to disruption in supply chains during COVID-19 pandemic. Necessary amount has been carried and will be used for the purchase of required microscope stage parts and optics in the next year.

  • 研究成果

    (10件)

すべて 2022 2021 その他

すべて 国際共同研究 (1件) 雑誌論文 (3件) (うち国際共著 2件、 査読あり 3件、 オープンアクセス 2件) 学会発表 (6件) (うち国際学会 4件、 招待講演 1件)

  • [国際共同研究] ACTREC, Tata Memorial Center, Mumbai(インド)

    • 国名
      インド
    • 外国機関名
      ACTREC, Tata Memorial Center, Mumbai
  • [雑誌論文] Microfluidics and surface-enhanced Raman spectroscopy, a win?win combination?2022

    • 著者名/発表者名
      Panneerselvam Rajapandiyan、Sadat Hasan、Hohn Eva-Maria、Das Anish、Noothalapati Hemanth、Belder Detlev
    • 雑誌名

      Lab on a Chip

      巻: 22 ページ: 665~682

    • DOI

      10.1039/d1lc01097b

    • 査読あり / 国際共著
  • [雑誌論文] Non-invasive diagnosis of colorectal cancer by Raman spectroscopy: Recent developments in liquid biopsy and endoscopy approaches2021

    • 著者名/発表者名
      Noothalapati Hemanth、Iwasaki Keita、Yamamoto Tatsuyuki
    • 雑誌名

      Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy

      巻: 258 ページ: 119818~119818

    • DOI

      10.1016/j.saa.2021.119818

    • 査読あり / オープンアクセス
  • [雑誌論文] DNA Fingerprint Analysis of Raman Spectra Captures Global Genomic Alterations in Imatinib-Resistant Chronic Myeloid Leukemia: A Potential Single Assay for Screening Imatinib Resistance2021

    • 著者名/発表者名
      Mojidra Rahul、Hole Arti、Iwasaki Keita、Noothalapati Hemanth、Yamamoto Tatsuyuki、C Murali Krishna、Govekar Rukmini
    • 雑誌名

      Cells

      巻: 10 ページ: 2506~2506

    • DOI

      10.3390/cells10102506

    • 査読あり / オープンアクセス / 国際共著
  • [学会発表] Label-free visualization of fungal cell and spore wall architecture by confocal Raman microscopy2021

    • 著者名/発表者名
      Hemanth Noothalapati and Tatsuyuki Yamamoto
    • 学会等名
      American Chemical Society Spring 2021
    • 国際学会
  • [学会発表] MCR-ALS assisted identification of spectral markers for objective discrimination of breast cancer from mammary epithelial cells by Raman microspectroscopy2021

    • 著者名/発表者名
      Hemanth Noothalapati, Keita Iwasaki, Asuka Araki, Tatsuyuki Yamamoto, Riruke Maruyama
    • 学会等名
      11th International Conference on Advanced Vibrational Spectroscopy
    • 国際学会
  • [学会発表] Raman Microspectrocopy: From label-free single cell imaging to disease diagnosis2021

    • 著者名/発表者名
      Hemanth Noothalapati and Tatsuyuki Yamamoto
    • 学会等名
      Indo-Japan Sakura Science Program
    • 招待講演
  • [学会発表] Machine learning assisted Raman microspectroscopy for objective discrimination of breast cancer cells from normal mammary epithelial cells2021

    • 著者名/発表者名
      Hemanth Noothalapati, Keita Iwasaki, Ajinkya Anjikar, Asuka Araki, Riruke Maruyama, Tatsuyuki Yamamoto
    • 学会等名
      Saratov Fall Meeting SFM'21 & 9th International Symposium on Optics and Biophotonics
    • 国際学会
  • [学会発表] Accurate classification of breast cancer cells from normal mammary epithelial cells by machine learning assisted Raman microspectroscopy2021

    • 著者名/発表者名
      Hemanth Noothalapati, Keita Iwasaki, Ajinkya Anjikar, Asuka Araki, Riruke Maruyama, Tatsuyuki Yamamoto
    • 学会等名
      12th International Symposium of Indian Scientist Association in Japan
    • 国際学会
  • [学会発表] Objective discrimination of drug resistant cells in chronic myeloid leukemia by Raman spectroscopy and multivariate curve resolution analysis2021

    • 著者名/発表者名
      Hemanth Noothalapati, Rahul Mojidra, Arti Hole, Keita Iwasaki, Tatsuyuki Yamamoto, Murali Krishna C and Rukmini Govekar
    • 学会等名
      第 19 回医用分光学研究会

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公開日: 2022-12-28  

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