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2014 年度 実績報告書

Study on effect of electrostatic interactions on stability of electron transfer complexes and amyloid fibrils

研究課題

研究課題/領域番号 25870407
研究機関大阪大学

研究代表者

李 映昊  大阪大学, たんぱく質研究所, 講師 (70589431)

研究期間 (年度) 2013-04-01 – 2015-03-31
キーワードAmyloid fibril / Binding thermodynamics / Calorimetry / Electron transfer / Electrostatics / Enzyme activity / Interprotein interaction / Protein misfolding
研究実績の概要

In order to understand contribution of electrostatic interactions to formation of electron transfer complex and their effects on enzymatic activity, we have conducted thermodynamic studies on binding reactions between ferredoxin (Fd) and sulfite reductase (SiR) as well as Fd and ferredoxin NADP(+)-reductase (FNR) using isothermal titration calorimetry, NMR spectroscopy, and X-ray crystallographic analysis together with FNR and SiR activity assays.
We have revealed that oppositely-charged Fd and SiR formed the electron transfer complex using attractive charge-charge interactions. In addition, non-electrostatic interactions is also important for fine tuning of binding modes between Fd and SiR to optimize SiR activity (Kim et al. (2015) and Kim et al. in preparation). The same results were obtained in the binding system between Fd and FNR (Kinoshita et al. (2015) under peer-review).
Simultaneously, we have investigated the conformational stability of amyloid fibrils of various amyloidogenic proteins/peptides such as alpha-synuclein and amyloid beta peptides in the wide temperature range (273-385K). Although all fibrils heat-denatured over 333K, only amyloid fibrils of alpha-synuclein cold-denatured below 293K due to the repulsive electrostatic interactions at low temperature (Ikenoue and Lee et al. (2014)). Effects of maturation of alpha-synuclein fibrils on stability have been further being examined.
We have clearly demonstrated that interprotein electrostatic interactions play an important roles in normal protein functions and in clearance of disease-related amyloid fibrils.

  • 研究成果

    (18件)

すべて 2015 2014

すべて 雑誌論文 (12件) (うち査読あり 12件、 オープンアクセス 1件) 学会発表 (5件) 図書 (1件)

  • [雑誌論文] Accurate Secondary Structure Prediction and Fold Recognition for Circular Dichroism Spectroscopy2015

    • 著者名/発表者名
      Andras Micsonai, Frank Wien, Linda Kernya, Young-Ho Lee, Yuji Goto, Matthieu Refregiers, and Jozsef Kardos
    • 雑誌名

      Proceedings of the National Academy of Sciences of the United States of America

      巻: ー ページ: 印刷中

    • DOI

      Nasi

    • 査読あり
  • [雑誌論文] Optimized Co-Solute Paramagnetic Relaxation Enhancement for the Rapid NMR Analysis of a Highly Fibrillogenic Peptide2015

    • 著者名/発表者名
      Nur Alia Oktaviani, Michael W. Risor, Young-Ho Lee, Rik P. Megens, Djurre H. de Jong, Renee Otten, Ruud M. Scheek, Jan J. Enghild, Niels Chr. Nielsen, Takahisa Ikegami, and Frans A. A. Mulder
    • 雑誌名

      Journal of Biomolecular NMR

      巻: ー ページ: 印刷中

    • DOI

      Nasi

    • 査読あり
  • [雑誌論文] Effects of a Reduced Disulfide Bond on Aggregation Properties of the Human IgG1 CH3 Domain2015

    • 著者名/発表者名
      Kazumasa Sakurai, Ryosuke Nakahata, Young-Ho Lee, Jozsef Kardos, Takahisa Ikegami, and Yuji Goto
    • 雑誌名

      Biochimica et Biophysica Acta

      巻: ー ページ: 印刷中

    • DOI

      10.1016/j.bbapap.2015.02.020

    • 査読あり
  • [雑誌論文] Ultrasonication-Dependent Formation and Degradation of Alpha-Synuclein Amyloid Fibrils2015

    • 著者名/発表者名
      Hisashi Yagi, Aiko Mizuno, Masatomo So, Miki Hirano, Masayuki Adachi, Yoko Akazawa-Ogawa, Yoshihisa Hagihara, Tatsuya Ikenoue, Young-Ho Lee, Yasushi Kawata, and Yuji Goto
    • 雑誌名

      Biochimica et Biophysica Acta

      巻: 1854 ページ: 209-217

    • DOI

      10.1016/j.bbapap.2014.12.014

    • 査読あり
  • [雑誌論文] Small Liposomes Accelerate the Fibrillation of Amyloid beta (1-40)2014

    • 著者名/発表者名
      Mayu S. Terakawa, Hisashi Yagi, Masayuki Adachi, Young-Ho Lee, and Yuji Goto
    • 雑誌名

      Journal of Biological Chemistry

      巻: 290 ページ: 815-826

    • DOI

      10.1074/jbc.M114.592527

    • 査読あり
  • [雑誌論文] Supersaturation-Limited Amyloid Fibrillation of Insulin Revealed by Ultrasonication2014

    • 著者名/発表者名
      Hiroya Muta, Young-Ho Lee, Jozsef Kardos, Yuxi Lin, Hisashi Yagi, and Yuji Goto
    • 雑誌名

      Journal of Biological Chemistry

      巻: 289 ページ: 18228-18238

    • DOI

      10.1074/jbc.M114.566950

    • 査読あり
  • [雑誌論文] Cold Denaturation of Alpha-Synuclein Amyloid Fibrils2014

    • 著者名/発表者名
      Tatsuya Ikenoue*, Young-Ho Lee*, Jozsef Kardos, Miyu Saiki, Hisashi Yagi, Yasushi Kawata, and Yuji Goto (*equal contribution)
    • 雑誌名

      Angewandte Chemie International Edition

      巻: 53 ページ: 7799-7804

    • DOI

      10.1002/anie.201403815

    • 査読あり
  • [雑誌論文] NMR Characterization of the Interaction of the Endonuclease Domain of MutL with Divalent Metal Ions and ATP2014

    • 著者名/発表者名
      Ryota Mizushima, Ju Yaen Kim, Isao Suetake, Hiroaki Tanaka, Tomoyo Takai, Narutoshi Kamiya, Yu Takano, Yuichi Mishima, Shoji Tajima, Yuji Goto, Kenji Fukui, and Young-Ho Lee
    • 雑誌名

      PLoS ONE

      巻: 9 ページ: e98554

    • DOI

      10.1371/journal.pone.0098554

    • 査読あり / オープンアクセス
  • [雑誌論文] Heat-induced Irreversible Denaturation of the Camelid Single Domain VHH Antibody is Governed by Chemical Modifications2014

    • 著者名/発表者名
      Yoko Akazawa-Ogawa, Mizuki Takashima, Young-Ho Lee, Takahisa Ikegami, Yuji Goto, Koichi Uegaki, and Yoshihisa Hagihara
    • 雑誌名

      Journal of Biological Chemistry

      巻: 289 ページ: 15666-15679

    • DOI

      10.1074/jbc.M113.534222

    • 査読あり
  • [雑誌論文] Heat of Supersaturation-limited Amyloid Burst Directly Monitored by Isothermal Titration Calorimetry2014

    • 著者名/発表者名
      Tatsuya Ikenoue*, Young-Ho Lee*, Jozsef Kardos, Hisashi Yagi, Takahisa Ikegami, Hironobu Naiki, and Yuji Goto (*equal contribution)
    • 雑誌名

      Proceedings of the National Academy of Sciences of the United States of America

      巻: 111 ページ: 6654-6659

    • DOI

      10.1073/pnas.1322602111

    • 査読あり
  • [雑誌論文] Solubility and Supersaturation-Dependent Protein Misfolding Revealed by Ultrasonication2014

    • 著者名/発表者名
      Yuxi Lin*, Young-Ho Lee*, Yuichi Yoshimura, Hisashi Yagi, and Yuji Goto (*equal contribution)
    • 雑誌名

      Langmuir

      巻: 30 ページ: 1845-1854

    • DOI

      10.1021/la403100h

    • 査読あり
  • [雑誌論文] Fine-Tuned Broad Binding Capability of Human Lipocalin-type Prostaglandin D Synthase for Various Small Lipophilic Ligands2014

    • 著者名/発表者名
      Satoshi Kume*, Young-Ho Lee*, Masatoshi Nakatsuji, Yoshiaki Teraoka, Keisuke Yamaguchi, Yuji Goto, and Takashi Inui (*equal contribution)
    • 雑誌名

      FEBS Letters

      巻: 588 ページ: 962-969

    • DOI

      10.1016/j.febslet.2014.02.001

    • 査読あり
  • [学会発表] Toward establishing the thermodynamics of protein misfolding and aggregation2015

    • 著者名/発表者名
      Young-Ho Lee
    • 学会等名
      先端融合科学シンポジウム「生体分子のダイナミクスを眺める」
    • 発表場所
      Kobe, Japan
    • 年月日
      2015-01-19 – 2015-01-20
  • [学会発表] Finely-tuned intermolecular interactions for protein function2015

    • 著者名/発表者名
      Young-Ho Lee
    • 学会等名
      Korea-Japan joint international seminar
    • 発表場所
      Osaka, Japan
    • 年月日
      2015-01-11 – 2015-01-11
  • [学会発表] Finely-tuned intermolecular interactions for protein function2014

    • 著者名/発表者名
      Young-Ho Lee
    • 学会等名
      The 11th Japan-Korea Bilateral Symposium on Biological NMR symposium
    • 発表場所
      Osaka, Japan
    • 年月日
      2014-12-17 – 2014-12-20
  • [学会発表] Thermodynamic characterization of supersaturation-limited protein misfolding and aggregation by calorimetry2014

    • 著者名/発表者名
      Young-Ho Lee
    • 学会等名
      International Seminar on "Mechanism and regulation of aberrant protein aggregation"
    • 発表場所
      Osaka, Japan
    • 年月日
      2014-11-17 – 2014-11-20
  • [学会発表] Heat of supersaturation-limited amyloid burst directly monitored by isothermal titration calorimetry2014

    • 著者名/発表者名
      Young-Ho Lee
    • 学会等名
      The 14th Annual Meeting of the Protein Science Society of Japan
    • 発表場所
      Yokohama, Japan
    • 年月日
      2014-06-25 – 2014-06-27
  • [図書] Sulfur Metabolism in Plants (Molecular Physiology and Ecophysiology)2015

    • 著者名/発表者名
      Ju Yaen Kim, Takahisa Ikegami, Yuji Goto, Toshiharu Hase, and Young-Ho Lee
    • 総ページ数
      300
    • 出版者
      Springer

URL: 

公開日: 2016-06-01  

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