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2010 Fiscal Year Final Research Report

Isolation and characterization of genome barrier genes in rice

Planned Research

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Project AreaGenome Barriers in Plant Reproduction
Project/Area Number 18075009
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionNational Institute of Genetics

Principal Investigator

KURATA Nori  National Institute of Genetics, 系統生物研究センター, 教授 (90178088)

Co-Investigator(Kenkyū-buntansha) KUBO Takahiko  国立遺伝学研究所, 系統生物研究センター, 助教 (00370148)
NONOMURA Ken-ichi  国立遺伝学研究所, 実験圃場, 准教授 (10291890)
TERADA Rie  名城大学, 農学部, 教授 (30137799)
Project Period (FY) 2006 – 2010
Keywordsゲノム障壁 / イネ / 生殖的隔離
Research Abstract

We performed isolation and functional analyses of four paired genes that interact with each other to cause reproductive barriers in inter-subspecific crosses between japonica and indica. These reproductive barrier genes showed various phenotypes including fertilization incompatibility, pollen germination defect, female sterility, and gamete sterility. We cloned a pair of duplicate genes, called DPL1 and DPL2, which cause the pollen germination defect. It was revealed that DPL1 and DPL2 are well conserved in dicot as well as monocot model plants, and many plant species have a duplicated gene copies on their nuclear genome.

  • Research Products

    (36 results)

All 2011 2010 2009 2008 2007 2006

All Journal Article (16 results) (of which Peer Reviewed: 16 results) Presentation (19 results) Book (1 results)

  • [Journal Article] Fatty acid elongase is required for shoot development in rice.2011

    • Author(s)
      Ito, Y., Kurata, N.(8番目), 他6名
    • Journal Title

      Plant J. 66

      Pages: 680-688

    • Peer Reviewed
  • [Journal Article] Rice interspecies hybrids show precocious or delayed developmental transitions in the endosperm without change to the rate of syncytial nuclear division.2011

    • Author(s)
      Ishikawa, R., Kurata, N.(5番目), 他4名
    • Journal Title

      Plant J. 65

      Pages: 798-806

    • Peer Reviewed
  • [Journal Article] A novel RNA-recognition-motif protein is required for premeiotic G1/S-phase transition in rice (Oryza sativa L.).2011

    • Author(s)
      Nonomura, K., Kurata, N.(10番目), 他8名
    • Journal Title

      Plos.Genet. 7

      Pages: e1001265

    • Peer Reviewed
  • [Journal Article] Distinct gene expression profiles in egg and synergid cells of rice as revealed by cell type-specific microarrays.2011

    • Author(s)
      Ohnishi, T., Kurata, N.(9番目), 他8名
    • Journal Title

      Plant Physiol. 155

      Pages: 881-891

    • Peer Reviewed
  • [Journal Article] Ovule is a lateral organ finally differentiated from the terminating floral meristem in rice.2011

    • Author(s)
      Yamaki, S., Nagato, Y., Kuarata, N., Nonomura, K.
    • Journal Title

      Dev.Biol. 351

      Pages: 208-216

    • Peer Reviewed
  • [Journal Article] Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes.2010

    • Author(s)
      Mizuta, Y., Harushima, Y., Kurata, N.
    • Journal Title

      Proc.Natl.Acad.Sci.USA 107

      Pages: 20417-20422

    • Peer Reviewed
  • [Journal Article] Rice expression atlas in reproductive development.2010

    • Author(s)
      Fujita, M., Kubo, T., Kurata, N.(17番目), 他16名
    • Journal Title

      Plant Cell Physiol. 51

      Pages: 2060-2081

    • Peer Reviewed
  • [Journal Article] A simple optimization can improve the performance of single feature polymorphism detection by Affymetrix expression arrays.2010

    • Author(s)
      Horiuchi, Y., Kurata, N.(7番目), 他5名
    • Journal Title

      BMC Genomics 11

      Pages: 315

    • Peer Reviewed
  • [Journal Article] A novel epistatic interaction at two loci causing hybrid male sterility in an inter-subspecific cross of rice (Oryza sativa L.).2008

    • Author(s)
      Kubo, T., Yamagata, Y., Eguchi, M., Yoshimura, A.
    • Journal Title

      Genes Genet.Syst. 83

      Pages: 443-453

    • Peer Reviewed
  • [Journal Article] MNU-induced mutant pools and high performance TILLING enable finding of any gene mutation in rice.2008

    • Author(s)
      Suzuki, T., Kurata, N.(8番目), 他6名
    • Journal Title

      Mol.Genet.Genomics 279

      Pages: 213-223

    • Peer Reviewed
  • [Journal Article] Various spatiotemporal expression profiles of anther-expressed genes in rice.2008

    • Author(s)
      Hobo, T., Kurata, N.(20番目), 他20名
    • Journal Title

      Plant Cell Physiol. 49

      Pages: 1417-1428

    • Peer Reviewed
  • [Journal Article] Separated transcriptomes of male gametophyte and tapetum in rice : validity of a laser microdissection (LM) microarray.2008

    • Author(s)
      Suwabe, K., Kurata, N.(16番目), 他16名
    • Journal Title

      Plant Cell Physiol. 49

      Pages: 1407-1416

    • Peer Reviewed
  • [Journal Article] A germcell-specific gene of the ARGONAUTE family is essential for the progression fo premeiotic mitosis and meiosis during sporogenesis in rice.2007

    • Author(s)
      Nonomura, K., Kurata, N.(7番目), 他5名
    • Journal Title

      Plant Cell 19

      Pages: 2583-2594

    • Peer Reviewed
  • [Journal Article] The Oryza bacterial artificial chromosome library resource : construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza.2006

    • Author(s)
      Ammiraju, J.S., Kurata, N.(16番目), 他25名
    • Journal Title

      Genome Res. 16

      Pages: 140-147

    • Peer Reviewed
  • [Journal Article] PLASTOCHRON2 regulates leaf initiation and maturation in rice.2006

    • Author(s)
      Kawakatsu, T., Kurata, N.(4番目), 他5名
    • Journal Title

      Plant Cell 18

      Pages: 612-625

    • Peer Reviewed
  • [Journal Article] PAIR2 is essential for homologous is chromosome synapsis in rice meiosis in rice meiosis I.2006

    • Author(s)
      Nonomura, K., Kurata, N.(5番目), 他3名
    • Journal Title

      J.Cell Sci. 119

      Pages: 217-225

    • Peer Reviewed
  • [Presentation] Various Reproductive Barriers in the Hybrids and Its Relation to Evolution.2010

    • Author(s)
      Kurata N.
    • Organizer
      8th International Symposium on Rice Functional Genomics
    • Place of Presentation
      Dall' Onder Grande Hotel, Brazil.
    • Year and Date
      2010-10-20
  • [Presentation] イネ亜種間交雑で生殖的隔離を引き起こす重複遺伝子DPL1,2 の解析2010

    • Author(s)
      水多陽子
    • Organizer
      日本遺伝学会第82回大会
    • Place of Presentation
      北海道大学高等教育機能開発総合センター
    • Year and Date
      2010-09-20
  • [Presentation] イネ亜種間交雑で生殖的隔離を引き起こすDOPPELGANSER(DPL)1 およびDPL2 遺伝子の解析2010

    • Author(s)
      水多陽子
    • Organizer
      第51回日本植物生理学会年会
    • Place of Presentation
      熊本大学
    • Year and Date
      2010-03-20
  • [Presentation] Geome barriers in the reproductive process of rice.2010

    • Author(s)
      Kurata N.
    • Organizer
      International Symposium of Cell-Cell Communication in Plant Reproduction : from pollination to fertiltzation
    • Place of Presentation
      奈良県新公会堂
    • Year and Date
      2010-03-12
  • [Presentation] Analysis of pair of genes, DOPPELGANGER (DPL) 1 and DPL2 responsible for reproductive isolation between two rice subspecies.2010

    • Author(s)
      Mizuta Y.
    • Organizer
      International Symposium of Cell-Cell Communication in Plant Reproduction : from pollination to fertiltzation
    • Place of Presentation
      奈良県新公会堂
    • Year and Date
      2010-03-11
  • [Presentation] イネ亜種間交雑で分離の歪みを示すゲノム領域の検出2009

    • Author(s)
      久保貴彦
    • Organizer
      日本育種学会第115回講演会
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      20090327-20090328
  • [Presentation] 日本晴とKinandang puti との交雑で見られる生殖隔離遺伝子座のマッピング2009

    • Author(s)
      新濱充
    • Organizer
      日本育種学会第115回講演会
    • Place of Presentation
      つくば国際会議場
    • Year and Date
      20090327-20090328
  • [Presentation] Genome evolution and reproductive barriers in rice.2009

    • Author(s)
      Kurata N.
    • Organizer
      6th International Rice Genetics symposium
    • Place of Presentation
      Manila Hotel(Philippines)
    • Year and Date
      2009-11-17
  • [Presentation] 野生イネ種間、種内変異とゲノム機能分化2009

    • Author(s)
      倉田のり
    • Organizer
      日本遺伝学会第81回大会
    • Place of Presentation
      信州大学
    • Year and Date
      2009-09-17
  • [Presentation] イネ亜種間交雑において生殖的隔離を引き起こす相互作用遺伝子座 DOPPELGANGER1 と2 の単離・解析2009

    • Author(s)
      水多陽子
    • Organizer
      日本遺伝学会第81回大会
    • Place of Presentation
      信州大学
    • Year and Date
      2009-09-17
  • [Presentation] F2 集団を使った配偶体または接合体内の2 遺伝子座間の相互作用による生殖的隔離の検出2009

    • Author(s)
      春島嘉章
    • Organizer
      日本育種学会第116回講演会
    • Place of Presentation
      北海道大学
    • Year and Date
      2009-02-26
  • [Presentation] イネ亜種間交雑で生殖的隔離障壁となる重複遺伝子の解析2008

    • Author(s)
      水多陽子
    • Organizer
      日本育種学会第114回講演会
    • Place of Presentation
      滋賀県立大学
    • Year and Date
      20081011-20081012
  • [Presentation] Identification of a Reproductive Barrier Working in the Process of Pollen Competition in Rice.2008

    • Author(s)
      倉田のり
    • Organizer
      XX International Congress of Genetics
    • Place of Presentation
      Berlin.
    • Year and Date
      20080712-20080717
  • [Presentation] Positional Cloning of a Pair of Interactive Genes Causing Reproductive Barrier in the Hybrid Pollen of Rice.2008

    • Author(s)
      水多陽子
    • Organizer
      XX International Congress of Genetics
    • Place of Presentation
      Berlin.
    • Year and Date
      20080712-20080717
  • [Presentation] Detection of Pairs of Interactive Reproductive Barriers in Rice Genome.2008

    • Author(s)
      春島嘉章
    • Organizer
      XX International Congress of Genetics.
    • Place of Presentation
      Berlin.
    • Year and Date
      20080712-20080717
  • [Presentation] 栽培イネの第3染色体の雄性配偶体型生殖的隔離障壁と相互作用する2007

    • Author(s)
      春島嘉章
    • Organizer
      第6染色体の雌性親遺伝子のポジショナルクローニング 日本育種学会第112回講演会
    • Place of Presentation
      山形大学
    • Year and Date
      2007-09-22
  • [Presentation] イネF2 集団における生殖的隔離障害の相互作用の検出2007

    • Author(s)
      春島嘉章
    • Organizer
      日本遺伝学会第79回大会
    • Place of Presentation
      岡山大学
    • Year and Date
      2007-09-21
  • [Presentation] イネの交雑後代に見出されたF2 雄性不稔の遺伝機構2007

    • Author(s)
      久保貴彦
    • Organizer
      日本遺伝学会第79回大会
    • Place of Presentation
      岡山大学
    • Year and Date
      2007-09-20
  • [Presentation] イネ雑種花粉で相互作用する2遺伝子座に起因する生殖的隔離2007

    • Author(s)
      水多陽子
    • Organizer
      日本遺伝学会第79回大会
    • Place of Presentation
      岡山大学
    • Year and Date
      2007-09-20
  • [Book] 「イネゲノムと生殖的隔離」細胞工学別冊"植物の進化"特集号2007

    • Author(s)
      倉田のり
    • Total Pages
      97-101
    • Publisher
      春島嘉章 秀潤社

URL: 

Published: 2012-02-13   Modified: 2016-04-21  

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