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2023 Fiscal Year Final Research Report

Development of fixed target micro-crystallography dedicated to structural dynamics study

Planned Research

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Project AreaNon-equilibrium-state molecular movies and their applications
Project/Area Number 19H05783
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Complex systems
Research InstitutionInstitute of Physical and Chemical Research

Principal Investigator

Yamamoto Masaki  国立研究開発法人理化学研究所, 放射光科学研究センター, 部門長 (60241254)

Co-Investigator(Kenkyū-buntansha) 熊坂 崇  公益財団法人高輝度光科学研究センター, 構造生物学推進室, 室長 (30291066)
Project Period (FY) 2019-06-28 – 2024-03-31
KeywordsX線結晶構造解析 / 構造ダイナミクス / 放射光
Outline of Final Research Achievements

We have developed a vacuum diffractometer for high-precision data collection on a fixed target and an in-situ measurement system for the generalization of dynamic X-ray crystallography. The vacuum diffractometer was found to be effective for low-background high S/N measurements, as the background was reduced by 99.9% under vacuum conditions compared to atmospheric conditions. The high-temperature humidity controller for the in-situ measurement system was used to control humidity up to 70°C and detect changes in protein structure and hydration structure. In addition, an injector-based microcrystal room temperature serial data collection combining the rtHAG and SS-ROX methods was successfully used for structural analysis. We also succeeded in developing a crystallization method suitable for humidity conditioning measurements to create different crystal systems depending on the scaffold protein.

Free Research Field

構造生物学

Academic Significance and Societal Importance of the Research Achievements

構造ダイナミクス研究に向けXFELビームタイムの確保が律速となるSFX法に加え、リング型放射光でも固定した多量の微小結晶のからの動的X線結晶構造解析の高度化が求められている。真空回折計は低バックグラウンド高S/N測定を実現して、構造変化の同期に有利なナノメートルサイズ結晶からの動的X線結晶構造解析を可能にする。また、非凍結での構造解析を実現するin-situ測定系は、恒温動物の体温域まで測定範囲を拡張しSS-ROX法と組み合わせることでタンパク質の生理活性温度環境での構造決定を可能にした。これらの技術開発により、広範な測定条件でのタンパク質の動的X線結晶構造解析を可能にする。

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Published: 2025-01-30  

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