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1991 Fiscal Year Final Research Report Summary

Comparative biochemical studies on structure, function and physiology of catechol dioxygenases

Research Project

Project/Area Number 02454565
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field General medical chemistry
Research InstitutionShiga University of Medical Science

Principal Investigator

NOZAKI Mitsuhiro  Shiga University of Medical Science, Professor, 医学部, 教授 (00025545)

Co-Investigator(Kenkyū-buntansha) ISHIDA Tetsuo  Shiga University of Medical Science, Assistant Professor, 医学部, 助手 (10176191)
NAKAI Chieko  Shiga University of Medical Science, Assistant Professor, 医学部, 助手 (30111892)
HORIIKE Kihachiro  Shiga University of Medical Science, Associate Professor, 医学部, 助教授 (80089870)
Project Period (FY) 1990 – 1991
KeywordsOxygenase / Catechol 1, 2-dioxygenase / Catechol 2, 3-dioxygenase / 3, 5-Dichlorocatechol dioxygenase / Nonheme iron containing enzyme / omicron-Nitrophenol / Gene cloning / Charge transfer complex
Research Abstract

Catechol dioxygenases are classified into two groups : intradiol and extradiol. We have previously determined the DNA sequence of an extradiol enzyme, catechol 2, 3-dioxygenase. In order to pursue comparative studies between various catechol dioxygenases, we have tried to determine the DNA sequence of intradiol enzymes.
1. we have studied the well known intradiol enzyme, catechol 1, 2dioxygenase and found for the first time the existence of 3 isozymes, au, ap, op, of this enzyme from Pseudomonas arvilla C-1. we also succeeded to clone the gene for this enzyme from Pseudomonas putida mt-2.
2. An enzyme which cleaves the benzene ring of 3, 5-dichlorocatechol has been purified to homogeneity for the first time from a Pseudoiwnad, grown with a herbicide, 2, 4-dichlorophenoxyacetic acid (2, 4-D), as the sole carbon source. The enzyme was found to be a nonheme ferric dioxygenase and to catalyze the intradiol cleavage of 3, 5-dichlorocatechol. Thus, the enzyme was designated as 3, 5-dichlorocatechol 1, 2dioxygenase. Judging from the substrate specificity, kinetic constants, and N-terminal amino acid sequence, the enzyme was distinct from other chlorocatechol dioxygenases reported previously. We have also succeeded to clone the gene for this enzyme and the determination of the DNA sequence is now underway.
3. For the elucidation of the active site structure of catechol 2, 3dioxygenase, we used o-nitrophenol, a competitive inhibitor, and found it a useful active site probe for this enzyme. Using this probe, a novel mode interaction between substrate or the analog and the enzyme has been proposed. Trials were made to substitute the iron cofactor in the active site of this enzyme by other metals, and to modify the enzyme by sulfhydryl (-SH) blocking reagents or by suicide substrata. Basic information has been obtained from these studies on this enzyme.

  • Research Products

    (14 results)

All Other

All Publications (14 results)

  • [Publications] C.Nakai,K.Horiike,S.Kuramitsu,H.Kagamiayama and M.Nozaki: "Three isozymes of catechol 1,2-dioxygenese(pyrocatechase),αα,αβ,and ββ,from Pseudomonas arvilla C-1." J.Biol.Chem.205. 660-665 (1990)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Horiike,T.Kobayashi,T.Ishida and M.Nozaki: "〇一Nitorophenol as an active site probe for catechol 2,3-dioxygenase." Yamada Conference XXVII International Symposium on Oxygenases and Oxygen Activation,edited by S.Yamamoto,M.Nozaki,Y.Ishimura. 15-18 (1991)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Koyama,T.Ishida,K.Horiike,M.Nozaki and Shimada: "Urate oxidase and copper content in the liver of macular mutant mouse,a model animal for human congenital copper deficiency,Menkes kinky hair disease." J.Nutr.Sci.Vitaminol.(1992)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Toji,K.Horiike,T.Ishida,T.Kobayashi, M.Nozaki and M.Okamoto: "Analytical and micro-preparative high-performance gel chromatography of proteins with a short colum of prous silica-based aqueous gels:Estimation on molecular size rapid determination of ligand binding constant,and purification of S-carboxymethylated proteins for microsequencing." J.Chromatography. (1992)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Manzoor A.Bhat,T.Ishida,K.Horiike,C.S.Vaidyanathan and M.Nozaki: "Purification of 3,5-dichlorocatechol 1,2-dioxygenase A nonheme iron dioxygenase and a key enzyme in the biodegradation of a herbicide,2,4-dichlorophenoxyacetic acid (2,4-D)from Pseudomonas cepacia CSV90" J.Biol.Chem.

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Manzoor A.Bhat,et al.: "Isolation and characterization of a new plasmid encoding genes for the degradation of 2-4dichlorophenoxyacetate(2,4,-D)from Pseudomonas Cepacia CSV90" J.Bacteriol.

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S,Yamamoto,M.Nozaki,and Y.Ishimura(editors): "International Symposium on Oxygenases and Oxygen Activation" Yamada Science Foundation, 217 (1991)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] C. Nakai, K. Horiike, S. Kuramitsu, H. Kagamiyama and M. Nozaki: "Three isozymes of catechol 1, 2-dioxygenase (pyrocatechase), alphaalpha, alphabeta, and betabeta, from Pseudomonas arvilla C-1." J. Biol. Chem. 205. 660-665 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K. Horiike, T. Kobayashi, T. Ishida and M. Nozaki: "omicron-Nitrophenol as an active site probe for catechol 2, 3-dioxygenase." Yamada Conference XXVII International Symposium on Oxygenases and Oxygen Activation. edited by S. Yamamoto, M. Nozaki, Y. Ishimura. 15-18 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M. Koyama, T. Ishida, K. Horiike, M. Nozaki and M. Shimada: "Urate oxidase and copper content in the liver of macular mutant mouse, a model animal for human congenital copper deficiency, Menkes'kinky hair disease" J. Nutr. Sci. Vitaminol.(1992)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H. Tojo, K. Horiike, T. Ishida, T. Kobayashi, M. Nozaki and M. Okamoto: "Analytical and micro-preparative high-performance gel chromatography of proteins with a short column of porous silica-based aqueous gels : Estimation of molecular size, rapid determination of ligand binding constant, and purification of S-carboxymethylated proteins for microsequencing" J. Chromatography. (1992)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Manzoor A. Bhat, T. Ishida, K. Horiike, C. S. Vaidyanathan and M. Nozaki: "Purification of 3, 5-dichlorocatechol 1, 2-dioxygenase, A nonheme iron dioxygenase and a key enzyme in the biodegradation of a herbicide, 2, 4-dichlorophenoxyacetic acid (2, 4-D) form Pseudomonas cepacia CSV90" J. Biol. Chem.

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Manzoor A. Bhat, et al.: "Isolation and characterization of a new plasmid encoding genes for the degradation of 2, 4-dichlorophenoxyacetate (2, 4-D) from Pseudomonas cepacia CSV90" J. Bacteriol.

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] S. Yamamoto, M. Nozaki, and Y. Ishimura (editors): "International Symposium on Oxygenases and Oxygen Activation" Yamada Science Foundation. 1-217 (1991)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1993-03-16  

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