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1995 Fiscal Year Final Research Report Summary

Structures and Formation Mechanisms of Folding Intermediates of Proteins

Research Project

Project/Area Number 06304051
Research Category

Grant-in-Aid for Co-operative Research (A)

Allocation TypeSingle-year Grants
Research Field Biophysics
Research InstitutionOsaka University

Principal Investigator

KATAOKA Mikio  Osaka University, Faculty of Science, Associate Professor, 理学部, 助教授 (30150254)

Co-Investigator(Kenkyū-buntansha) KIHARA Hiroshi  Kansai Medical University, Physics Laboratory, Professor, 医学部, 教授 (20049076)
GEKKO Kunihiko  Hiroshima University, Faculty of Science, Professor, 理学部, 教授 (10023467)
KUWAJIMA Kunihiro  Tokyo University, Faculty of Science, Associate Professor, 理学系研究科, 助教授 (70091444)
AKASAKA Kazuyuki  Kobe University, Faculty of Science, Professor, 理学部, 教授 (50025368)
GOTO Yuji  Osaka University, Faculty of Science, Associate Professor, 理学部, 助教授 (40153770)
Project Period (FY) 1994 – 1995
Keywordsprotein folding / molten globule / X-ray solution scattering / protein denturation / high pressure NMR / stopped-flow CD / chaperonine / gene engineering
Research Abstract

Solution structures of molten globules (MG) of various proteins were investigated in detail by solution X-ray scattering. The structure of MG can be classified into two categories : one is close to native structure and the other is composed of a hydrophobic core and flaring tail (s) . Some MG's are stabilized mainly by hydrophobic interaction, the other MG's are stabilized mainly by intramolecular SS bonds. The denatured states cannot be generalized by a term, random coil, because the structural diversity and variety in the denatured states were also indicated.
Kinetic studies of beta-lactoglobulin folding demonstrated the accumulation of intermediate with non-native secondary structure, which suggests the importance of non-hierarchical model for folding. Isothermal titration calorimetric measurements on MG formation indicated that the hydrophobic interaction existed in MG is almost 40% of that in native state.
It was revealed that denaturant-induced denaturation of alpha-subunit of tryp … More tophane synthase is 3 states, however its thermal denaturation is 2 states. Kinetic studies on proline mutants indicated the existence of two successive intermediates in the folding process of alpha-subunit of tryptophane synthase. Proline residues are contributed to the stability of the late intermediate.
The mechanism of target recognition by chaperonine have been investigated using MG of alpha-lactalbumin to reveal the importance of electro-static interaction.
Theoretical studies were performed on the global structures of MG and the determinant, especially the contribution of water to the MG formation. Models of MG were proposed to various proteins and the calculated scattering profiles were compared with the observed ones. Consequently the proposed theoretical method was turned out to be quite promising for the folding studies.
High pressure NMR method for protein solution was developed and applied to thermal denaturation of RNase A.It was revealed that RNase A undergoes two-state transition even under high pressure. A volume change by denaturation was negative and also a heat capacity at constant pressure was decreased significantly by addition of pressure. Adiabatic compressibility upon denaturation was measured precisely. Less

  • Research Products

    (111 results)

All Other

All Publications (111 results)

  • [Publications] Mikio Kataoka: "Energy coupling in an ion pump : The reprotonation switch of bacteriorhodopsin" Journal of Molecular Biology. 243. 621-638 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ichiro Nishii: "Cold-denaturation of the molten globule state of apomyoglobin and a profile of protein folding" Biochemistry. 33. 4903-4909 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mikio Kataoka: "Structural characterization of molten globule and native states of apomyoglobin by solution X-ray scattering" Journal of Molecular Biology. 249. 215-228 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ichiro Nishii: "Thermodynamic stability of the molten globule states of apomyoglobin" Journal of Molecular Biology. 250. 223-228 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Takashi Konno: "Small angle X-ray scattering analysis of cold-, heat-, and urea-denatured state in a protein, Streptomyces subtilisin inhibitor" Journal of Molecular Biology. 251. 95-103 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yoshinobu Izumi: "The chain dynamics of mastoparan bound to calmodulin" Physica. B213&214. 772-774 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yasushi Imamoto: "Reconstitution of photoactive yellow protein from apoprotein and p-coumaric acid derivatives" FEBS Letters. 374. 157-160 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 片岡幹雄: "タンパク質のX線溶液散乱" 生物物理. 35. 239-241 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Daizo Hamada: "Role of heme axial ligands in the conformational stability of the native and molten globule states of horse cytochrome C" Journal of Molecular Biology. 256. 172-186 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mikio Kataoka: "The linker of calmodulin lacking Glu84 is elongated in solution ; Although it is bent in the crystal" Proteins : Structure, Function and Genetetics. (印刷中). (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hironari Kamikubo: "Structure of the N intermediate of bacteriorhodopsin revealed by X-ray diffraction" Proceedings of National Academy of Science, U. S. A.(印刷中). (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Li Shi: "Conformational characterization of DnaK and its complexes with substate protein by small-angle X-ray scattering" Biochemistry. (印刷中). (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Daizo Hamada: "Salt-induced formation of the molten globule state of cytochrome c studied by isothermal titration calorimetry" Proceedings of National Academiy of Science, U. S. A.91. 10325-10329 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yoshihisa Hagihara: "Comparison of the conformational stability of the molten globule and native states of horse cytochrome c" Journal of Molecular Biology. 237. 336-348 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yoshihisa Hagihara: "Thermal unfolding of tetrameric melittin : Comparison with the molten globule state of cytochrome c" Protein Science. 3. 1418-1429 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kentaro Shiraki: "Trifluoroethanol-induced stabilization of the α-helical structure of β-lactoglobulin : Implication for non-hierarchical protein folding" Journal of Molecular Biology. 245. 180-194 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Daizo Hama: "Salt-induced formation of the molten globule state of apomyoglobin studied by isothermal titration calorimetry" Thermochica Acta. 266. 385-400 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Daizo Hamada: "High helical propensity of the peptide fragments derived from β-lactoglobulin, a predominantly β-sheet protein" Journal of Molecular Biology. 254. 737-746 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kouhei Tsumoto: "Effect of the order of antibody variable regions on the expression of the single-chain HYHEL10 Fv fragment in E. coli and the thermodynamic analysis of its antigen-binnding properties" Biochemical and Biophysical Researcg Communication. 201. 546-551 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Masafumi Odaka: "Tyr-341 of the β subunit is a major Km-determining residues of TF1-ATPase : Parallel effect its mutations on Kd(ATP)of the β subunit and on Km(ATP)of the α3β3γ complex" Journal of Biochemistry. 115. 789-796 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 油谷克英: "安定性" 蛋白質核酸酵素. 39. 1017-1026 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kouhei Tsumoto: "Contribution to antibody-antigen interaction of structurally perturbed antigenic residues upon antibody binding" Journal of Biological Chemistry. 269. 28777-28782 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kyoko Ogasahara: "Unfolding-refolding Kinetics of the Tryptophan Synthase α Subunit by CD and fluorescence measurements" Journal of Molecular Biology. 236. 1227-1240 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kouhei Tsumoto: "Role of Tyr residues in the contact region of anti-lysozyme monoclonal antibody HyHEL10 for antigen binding" Journal of Biological Chemistry. 270. 18551-18557 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 油谷克英: "タンパク質の変性の熱力学" 生物物理. 35. 3-7 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kazufumi Takano: "Contribution of hydrophobic residues to the stability of human lysozyme" Journal of Molecular Biology. 254. 62-76 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kazufumi Yamazaki: "Folding pathway of Escherichia coli ribonuclease HI : A circular dichroism, fluorescence, and NMR study" Biochemistry. 34. 16552-16562 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Tohru Yamaguchi: "Thermodynamics of Unfolding of Ribonuclease A Under High Pressure. A Study by Proton NMR" Journal of Molecular Biology. 250. 689-694 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Atsuo Tamura: "Dynamics of the three methionyl side chains of Streptomyces subtilisininhibitor. Deuterium NMR studies in solution and in solid" Protein Science. 5. 127-139 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kaori Chiba: "Kinetic study on myoglobin refolding monitored by five optical stopped-flow methods" Protein : Structure, Function Genetics. 19. 110-119 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hideo Arakawa: "The Kinetics of conformational changes of α-2 macroglobulin determined by time resolved X-ray solution scattering" FEBS Letters. 337. 171-174 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hiroshi Kihara: "Stopped-flow apparatus for X-ray scattering and XAFS" Journal of Synchrotron Radiation. 1. 74-77 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hirotsugu Tsuruta: "Kinetics of the quaternary structure change of aspartate transcarbamylase triggered by succinate, a competitive inhibitor" Biochemistry. 33. 10007-10012 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Mamoru Sato: "The ATP-hydrolyzing excited structure of the reconstituted α3β3 complex of ATP synthase from thermophilic bacterium PS3 : the structural feature revealed by time-resolved small-angle x-ray scattering with synchrotron radiation" Journal of Biochemistry. 117. 113-119 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yoshihiko Igarashi: "Solution X-ray scattering study on the chaperonin GroEL for Escherichia coli" Biophysical Chemistry. 53. 259-266 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Akira Okazaki: "The chaperonin GroEL does not recognize apo-alpha-lactalbumin in the molten globule state" Nature Structural Biology. 1. 439-446 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 桑島邦博: "蛋白質の折れ畳みの速度論" SR科学技術情報. 4(12). 2-10 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 桑島邦博: "折れ畳み機構" 蛋白質核酸酵素. 39. 1011-1016 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 桑島邦博: "球状タンパク質のモルテン・グロビュール状態" CBINews. 14. 11-13 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] N. N. Kalnin: "Kinetic folding and unfolding of staphylococcal nuclease and its six mutants studied by stopped-flow circular dichroism" Proteins : Structure, Function, Genetics. 23. 163-176 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Akira Okazaki: "What is the molten globule? Reply" Nature Structure Biology. 2. 10-11 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hidefumi Uchiyama: "Effects of amino acid substitutions in the hydrophobic core of α-lactalbumin on the stability of the molten globule state" Protein Engineering. (印刷中). (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kunihiro Kuwajima: "The molten globule state of α-lactalbumin" FASEB Journal. 10. 102-109 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kumiko Katsumata: "Effect of GroEL on the refolding kinetics of α-lactalbumin" Journal of Molecular Biology. (印刷中). (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 桑島邦博: "GroELによる標的タンパク質認識の分子機構" 蛋白質・核酸・酵素. (印刷中). (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kunihiko Gekko: "Point mutationa at glycine-121 of Escherichia coli dihydrofolate reductase : Important roles of a flexible loop in the stability and function" Journal of Biochemistry. 116. 34-41 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 月向邦彦: "高圧下における食品高分子のゾル-ゲル転移" New Food Industry. 36. 68-79 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Youjiro Tamura: "Compactness of thermally and chemically denatured ribonuclease A as revealed by volume and compressibility" Biochemistry. 34. 1878-1884 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 月向邦彦: "密度と部分比容の測定" 蛋白質・核酸・酵素. 40. 2461-2465 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kunihiko Gekko: "A large compressibility change of protein induced by a single amino acid substitution" Protein Science. 5(印刷中). (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Eiji Ohmae: "Effects of point mutation at a flexible loop glycine-67 of Escherichia coli dihydrofolate reductase on the stability and function" Journal of Biochemistry. (印刷中). (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kunitsugu Soda: "Transfer-thermodynamic quantities and the hydorphobic effect" Journal of Physical Society of Japan. 63. 814-824 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 曽田邦嗣: "タンパク質の構造安定性の熱力学と疎水効果" ぶんせき. 1995(8). 630-637 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hideki Tsujishita: "Potential-scaled/hot-solute molecular dynamics for modeling of the three-dimensional structure of polypeptides in solution" Biophysical Journal. 66. 1815-1822 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kyohei Kato: "Solution sructure of HIV-1 protease P allophenylnorstatine derivative inhibitor obtained from molecular dynamics simulation" Chemical Pharmaceutical Bullettin. 42. 176-178 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Noriyuki Yamaotsu: "Solvation free energies of amino acids calculated by molecular dynamics/free energy perturbation method" Chemical Pharmaceutical Bullettin. 43. 717-721 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Kataoka, H.Kamikubo, F.Tokunaga, L.S.Brown, Y.Yamazaki, A.Maeda, M.Sheves, R.Needleman & J.K.Lanyi: "Energy coupling in an ion pump : The reprotonation switch of bacteriorhodopsin" Journal of Molecular Biology. 243. 621-638 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] I.Nishii, M.Kataoka, F.Tokunaga & Y.Goto: "Cold-denaturation of the molten globule state of apomyoglobin and a profile of protein folding" Biochemistry. 33. 4903-4909 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] D.Hamada, H.Fukada, K.Takahashi & Y.Goto: "Salt-induced formation of the molten globule state of cytochrome c studied by isothermal titration calorimetry" Proc.Natl.Acad.Sci.U.S.A.91. 10325-10329 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Hagihara, Y.Tan & Y.Goto: "Comparison of the conformational stability of the molten globule and native states of horse cytochrome c.Effects of acetylation, heat, urea and guanidine hydrochlolide" Journal of Molecular Biology. 237. 336-348 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Hagihara, M.Oobatake & Y.Goto: "Thermal unfolding of tetrameric melittin : Comparison with the molten globule state of cytochrome c" Protein Science. 3. 1418-1429 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Tsumoto, Y.Nakaoki, Y.Ueda, K.Ogasahara, K.Yutani, K.Watanabe & I.Kumagai: "Effect of the order of antibody variable regions on the expression of the single-chain HYHEL10Fv fragment in E.coli and the thermodynamic analysis of its antigen-binding properties" Biochem.Biophys.Res.Comm.201. 546-551 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M.Odaka, C.Kaibara, T.Amano, T.Matsui, E.Muneyuki, K.Ogasahara, K.Yutani & M.Yoshida: "Tyr-341 of the beta subunit is a major Km-determining residues of TF1-ATPase : Parallel effect of its mutations on Kd (ATP) of the beta subunit and on Km (ATP) of the alpha3beta3gamma complex" Journal of Biochemistry. 115. 789-796 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Yutani: "Stability (in Japanese)" Protein, Nucleic Acid, Enzyme. 39. 1017-1026 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Tsumoto, Y.Ueda, K.Maenaka, K.Watanabe, K.Ogasahara, K.Yutani & I.Kumagai: "Contribution to antibody-antigen interaction of structurally perturbed antigenic residues upon antibody binding" J.Biol.Chem.269. 28777-28782 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Ogasahara & K.Yutani: "Unfolding-refolding kinetics of the tryptophan synthase alpha subunit by CD and fluorescence measurements" Journal of Molecular Biology. 236. 1227-1240 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Chiba, A.Ikai, Y.Kawamura-Konishi, D.Eliezer & H.Kihara: "Kinetic study on myoglobin refolding monitored by five optical stopped-flow methods" Proteins : Struct.Funct.Genet.19. 110-119 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Arakawa, T.Urisaka, H.Tsuruta, Y.Amemiya, H.Kihara & A.Ikai: "The Kinetics of conformational changes of alpha-2 mecroglobulin determined by time resolved X-ray solution scattering" FEBS Letters. 337. 171-174 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Kihara: "Stopped-flow apparatus for x-ray scattering and XAFS" J.Synchrotron Rad.1. 74-77 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Tsuruta, P.Vachette, T.Sano, M.F.Moody, Y.Amemiya, K.Wakabayashi & H.Kihara: "Kinetics of the quaternary structure change of aspartate transcarbamylase triggered by succinate, a competitive inhibitor" Biochemistry. 33. 10007-10012 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] A.Okazaki, T.Ikura, K.Nikaido & K.Kuwajima: "The chaperonin GroEL does not recognize apo-alpha-lactalbumin in the molten globule state" Nature Struct.Biol.1. 439-446 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Kuwajima & T.Ikura: "Folding Mechanism (in Japanese)" Protein, Nucleic Acid, Enzyme. 39. 1011-1016 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Kuwajima: "Molten globule states of globular proteins (in Japanese)" CBI News. 14. 11-13 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Gekko, Y.Kunori, H.Takeuchi, S.Ichihara & M.Kodama: "Point mutationa at glycine-121 of Escherichia coli dihydrofolate reductase : Important roles of a flexible loop in the stability and function" Journal of Biochemistry. 116. 34-41 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Gekko: "Sol-gel transition of food polymer under high pressure (in Japanese)" New Food Industry. 36. 68-79 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Soda & N.Tsuruta: "Transfer-thermodynamic quantities and the hydorphobic effect" J.Phys.Soc.Jpn.63. 814-824 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Tsujishita, I.Moriguchi & S.Hirono: "Potential-scaled/hot-solute molecular dynamics for modeling of the three-dimensional structure of polypeptides in solution" Biophysical Journal. 66. 1815-1822 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] R.Kato, O.Takahashi, Y.Kiso, I.Moriguchi & S.Hirono: "Solution structure of HIV-1 protease P allophenylnorstatine derivative inhibitor obtained from molecular dynamics simulation" Chem.Pharm.Bull.42. 176-178 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M.Kataoka, I.Nishii, T.Fujisawa, T.Ueki, F.Tokunaga & Y.Goto: "Structural characterization of molten globule and native states of apomyoglobin by solution X-ray scattering" Journal of Molecular Biology. 249. 215-228 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] I.Nishii, M.Kataoka & Y.Goto: "Thermodynamic stability of the molten globule states of apomyoglobin" Journal of Molecular Biology. 250. 223-228 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T.Konno, M.Kataoka, Y.Kamatari, K.Kanaori, A.Nosaka & K.Akasaka: "Small angle X-ray scattering analysis of cold-, heat-, and urea-denatured states in a protein, Streptomyces subtilisin inhibitor" Journal of Molecular Biology. 251. 95-103 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Izumi, K.Sakai, H.Yoshino & M.Kataoka: "The chain dynamics of mastoparan bound calmodulin" Physica. B213&214. 772-774 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Imamoto, T.Ito, M.Kataoka & F.Tokunaga: "Reconstitution of photoactive yellow protein from apoprotein and p-coumaric acid derivatives" FEBS Letters. 374. 157-160 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M.Kataoka: "X-ray solution scattering of proteins (in Japanese)" Seibutsu-butsuri. 35. 239-241 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Shiraki, K.Nishikawa & Y.Goto: "Trifluoroethanol-induced stabilization of the alpha-helical structure of beta-lactoglobulin : Implication for non-hierarchical protein folding" Journal of Molecular Biology. 245. 180-194 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] D.Hamada, H.Fukuda, K.Takahashi & Y.Goto: "Salt-induced formation of the molten globule state of apomyoglobin studied by isothermal titration calorimetry" Thermochica Acta. 266. 385-400 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] D.Hamada, Y.Kuroda, T.Tanaka & Y.Goto: "High helical propensity of the peptide fragments derived from beta-lactoglobulin, a predominantly beta-sheet protein : Implication for non-hierarchical protein folding" Journal of Molecular Biology. 254. 737-746 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Tsumoto, K.Ogasahara, Y.Ueda, K.Watanabe, K.Yutani & I.Kumagai: "Role of Tyr residues in the contact region of anti-lysozyme monoclonal antibody HyHEL10 for antigen binding" J.Biol.Chem.270. 18551-18557 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Yutani: "Thermodynamics of protein denaturation (in Japanese)" Seibutsubutsuri. 35. 3-7 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Takano, K.Ogasahara, H.Kaneda, Y.Yamagata, S.Fujii, E.Kanaya, M.Kikuchi, M.Oobatake & K.Yutani: "Contribution of hydrophobic residues to the stability of human lysozyme : Calorimetric studies and X-ray structural analysis of the five isoleucine to valine mutants" Journal of Molecular Biology. 254. 62-76 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Yamazaki, K.Ogasahara, K.Yutani, M.Oobatake & S.Kanaya: "Folding pathway of Escherichia coli ribonuclease HI : A circular dichroism, fluorescence, and NMR study" Biochemistry. 34. 16552-16562 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T.Yamaguchi, H.Yamada & K.Akasaka: "Thermodynamics of unfolding of ribonuclease A under high pressure. A study of proton NMR" Journal of Molecular Biology. 250. 689-694 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M.Sato, Y.Ito, M.Harada, H.Kihara, H.Tsuruta, S.Ohta & Y.Kagawa: "The ATP-hydrolyzing excited structure of the reconstituted alpha3beta3 complex of ATP synthase from thermophilic bacterium PS3 : the structural feature revealed by time-resolved small-angle x-ray scattering with synchrotron radiation" Journal of Biochemistry. 117. 113-119 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Igarashi, K.Kimura, K.Ichimura, S.Matsuzaki, T.Ikura K.Kuwajima & H.Kihara: "Solution X-ray scattering study on the chaperonin GroEL for Escherichia coli" Biophysical Chemistry. 53. 259-266 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] N.N.Kalnin & K.Kuwajima: "Kinetic folding and unfolding of staphylococcal nuclease and its six mutants studied by stopped-flow circular dichroism" Proteins : Struct.Funct.Genet.23. 163-176 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] A.Okazaki, T.Ikura & K.Kuwajima: "What is the molten globule? Reply" Neture Struct.Biol.2. 10-11 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Uchiyama, E.M.Perez-Prat, K.Watanabe, I.Kumagai & K.Kuwajima: "Effects of amino acid substitutions in the hydrophobic core of alpha-lactalbumin on the stability of the molten globule state" Protein Engineering. (in press). (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Tamura & K.Gekko: "Compactness of thermally and chemically denatured ribonuclease A as revealed by volume and compressibility" Biochemistry. 34. 1878-1884 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Gekko: "Measurements of density and partial specific volume (in Japanese)" Protein, Nuclecic Acid, Enzyme. 40. 2461-2465 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Soda: "Thermodynamics of the structural stability of proteins and the hydrophobic effect (in Japanese)" Bunseki. 1995 (8). 630-637 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] N.Yamaotsu, I.Moriguchi & S.Hirono: "Solvation free energies of amino acids calculated by molecular dynamics/free energy perturbation method" Chem.Pharm.Bull.43. 717-721 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] D.Hamada, Y.Kuroda, M.Kataoka, S.Aimoto, T.Yoshimura & Y.Goto: "Role of heme axial ligands in the conformational stability of the native and molten globule states of horse cytochrome c" Journal of Molecular Biology. 256. 172-186 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M.Kataoka, A.Persechini, F.Tokunaga & R.H.Kretsinger: "The linker of calmodulin lacking Glu84 is elongated in solution ; Although it is bent in the crystal" Proteins : Struct, Funct, Genet. (in press). (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Kamikubo, M.Kataoka, G.Varo, T.Oka, F.Tokunaga, R.Needleman & J.K.Lanyi: "Structure of the N intermediate of bacteriorhodopsin revealed by X-ray diffraction" Proc.Natl.Acad.Sci.U.S.A.(in press). (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] L.Shi, M.Kataoka & A.L.Fink: "Conformational characterization of DnaK and its complexes with substrate protein by small-angle X-ray scattering" Biochemistry. (in press). (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] A.Tamura, M.Matsushita, A.Naito, S.Kojima, K.-I.Miura & K.Akasaka: "Dynamics of the three methionyl side chains of Streptomyces subtilisininhibitor. Deuterium NMR studies in solution and in solid" Protein Science. 5. 127-139 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Kuwajima: "The molten globule state of alpha-lactalbumin" FASEB Journal. 10. 102-109 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Katsumata, A.Okazaki & K.Kuwajima: "Effect of GroEL on the refolding kinetics of alpha-lactalbumin" Journal of Molecular Biology. (in press). (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Kuwajima: "Molecular mechanism of target protein recognition by GroEL (in Japanese)" Protein, Nucleic Acid, Enzyme. (in press). (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Gekko, Y.Tamura, E.Ohmae, H.Hayashi, H.Kagamiyama & H.Ueno: "A large compressibility change of protein induced by a single amino acid substitution" Protein Science. 5 (in press). (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] E.Ohmae, K.Iriyama, S.Ichihara & K.Gekko: "Effects of point mutation at a flexible loop glycine-67 of Escherichia coli dihydrofolate reductase on the stability and function" Journal of Biochemistry. (in press). (1996)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1997-03-04  

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