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2000 Fiscal Year Final Research Report Summary

Principle of diversity, differentiation, and stability in biological systems

Research Project

Project/Area Number 11837004
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research InstitutionThe University of Tokyo

Principal Investigator

KANEKO Kunihiko  The University of Tokyo, Graduate School of Arts and sciences, Professor, 大学院・総合文化研究科, 教授 (30177513)

Project Period (FY) 1999 – 2000
Keywordscoupled dynamical systems / system with discrete molecule numbers / memory / differentiation / irreversibility / chaos / relaxation / development
Research Abstract

We have searched for universal logic of a life systemin terms of dynamical systems, while characteristics of novel dynamical systems to support life systems have also been studied.
(1) Cell differentiation : Earlier we have shown that robust development and cell differentiation are universal outcome in a prototype cell system with reaction networks, cell-cell interaction through diffusion, and reproduction. The reaction network allowing for chaotic dynamics is generally shown to support such differentiation, and that such cell system is found to have a higher growth rate as a cell ensemble, by achieving cooperation. Such system exhibits irreversible differentiation process from totipotency to determination, which is characterized by the decrease of chemical diversity and dynamic plasticity.
(2) Extending the above model to include spatially local interaction, spontaneousgeneration of positional information is found, which supports robust morphogenesis.
(3) Considering a system of mutually … More catalyzing molecules, spontaneous formation of a molecule working as information carrier is demonstrated, that leads to the origin of information in a cell.
(4) In a system with small number of molecules, a novel phase that was not treated by continuum description is discovered, which can be related with signaling dynamics in a cell.
(5) Theory of robust sympatric speciation is proposed by theisologous diversification mechanism.
(6) In coupled dynamical systems with a variety of time scales, a mechanism in which faster elements influence slower elements is discovered.
(7) In a class of Hamiltonian dynamics with a large degree of freedoms, it is shown that energy can be stored over long time, which increases exponentially with the stored energy, while the time is shown tobe inversely proportional to residual Kolomogorov-Sinai entropy. Connection with energy transduction in molecular motor is also discussed.
(8) Dynamical systemsgame theory, function dynamics as an abstract cognition system, and dynamical systems feature of computation process have also been studied Less

  • Research Products

    (66 results)

All Other

All Publications (66 results)

  • [Publications] K.Kaneko: "Isologous Diversification for Robust Development of Cell Society"J.Theor.Biol.. 199. 243-256 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Fujimoto: "Noise Induced Boundary Dependence through Convective Instability"Physica D. 129. 203-222 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Yamamoto: "Tile Automaton : a model for an architecutre of a living system"Artificial Life. 5. 37-76 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Shibata: "Noiseless Colletive Motion our of Noisy Chaos"Phys.Rev.Lett.. 82. 4424-4427 (1999)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] N.Kataoka: "Functional Dynamics I"Physica D,. (in press).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] N.Nakagawa: "Energy Storage in a Hamiltonian System in Partial Contact with a Heat Bath"J.Phys.Soc.Japan,. (in press).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Kaneko: "Robust and Irreversible Development in Cell Society as a General Consequence of Intra-Inter Dynamics"Physica A, in press.

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 金子邦彦: "複雑系生命科学の構築にむけて(1)"パリティ. 15-01. 4-11 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 金子邦彦: "複雑系生命科学の構築にむけて(2)"パリティ. 15-02. 4-13 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 金子邦彦: "複雑系生命科学の構築にむけて(3)"パリティ. 15-03. 21-25 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 金子邦彦: "複雑系生命科学の問題"数理科学. 441. 28-36 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Kaneko and I.Tsuda: "Complex Systems : Chaos and Beyond"A Constructive Approach with Applications in Life Sciences (Springer). 1-273 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Kaneko and C.Furusawa: "Robust and irreversible development in cell soceity as a general consequence of intra-inter dynamics"Physica A. 280. 23-33 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] C.Furusawa and K.Kaneko: "Origin of complexity in multicellular organisms"Phys.Rev.Lett.. 84. 6130-6133 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] C.Furusawa and K.Kaneko: "Theory of Robustness of Irreversible Differentiation in a Stem Cell System : Chaos Hypothesis"J.Theor.Biol. (in press). (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Kaneko and T.Yomo: "Sympatric Speciation : compliance with phenotype diversification from a single genotype"Proc.Roy.Soc.B. 267. 2367-2373 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Takagi,K.Kaneko,and T.Yomo: "Evolution of genetic code through isologous diversification of cellular states"Artificial Life. 6・4. (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Fujimoto and K.Kaneko: "Sensitive boundary condition dependence of noise-sustained structure"Phys.Rev.E.. 63・4. (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] A.Togashi and K.Kaneko: "Digitality Induced Transition in a Small Autocatalytic System"Phys.Rev.Lett.. 86. 2459-2462 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] N.Kataoka and K.Kaneko: "Functional Dynamics I"Physica D. 138. 225-250 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] N.Kataoka and K.Kaneko: "Functional Dynamics II"Physica D. 149. 174-196 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] N.Kataoka and K.Kaneko: "Functional Dynamics for Natural Language"BioSystems. 57. 1-11 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.Takahashi,N.Kataoka,K.Kaneko,and T.Namiki: "Function Dynamics"Jap J.Appl.Math.. (in press). (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] E.Akiyama and K.Kaneko: "Dynamical Systems Game Theory and Dynamics of Games"Physica D. 147. 221-258 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] A.Saito and K.Kaneko: "Inaccessibility and Undecidability in Computation, Geometry and Dynamical Systems"Physica D. (in press).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] N.Nakagawa and K.Kaneko: "Energy Absorption and Storage in a Hamiltonian System in Partial Contact with a Heat Bath"J.Phys.Soc.Japan. 69. 36-39 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] N,Nakagawa,K.Kaneko and T.S.Komatsu: "Long-term Relaxation of a Composite System in Partial Contact with a Heat Bath"J.Phys.Soc.Jpn. 69. 3214-3222 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] J.Ito and K.Kaneko: "Self-organized hierarchical structure in a plastic network of chaotic units"Neural Networks. 13. 275-281 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] N.B.Ouchi and K.Kaneko: "Coupled Map with Local and Global interactions"Chaos. 10. 359-365 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K Kaneko and T Yomo: "Sympatric Speciation from Interaction-induced Phenotype Differentiation"Proceedings of the Artificial Life VII conference (MIT press, ed.M Bedau et al.). 113-121 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] C Furusawa and K Kaneko: "Complex organization in multicellularity as a necessity in evolution"Proceedings of the Artificial Life VII conference (MIT press, ed.M Bedau et al.). 103-112 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H Takagi and K Kaneko: "Evolution of genetic code through isologous diversification of cellular states"Proceedings of the Artificial Life VII conference (MIT press, ed.M Bedau et al.). 122-131 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] E Akiyama,K Kaneko: "Social Dilemma and Dynamical Systems Game"Artificial Life VII conference (MIT press, ed.M Bedau et al.). 186-195 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 金子邦彦: "複雑系生命科学の構築にむけてI"パリティ. 15・1. 4-11 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 金子邦彦: "複雑系生命科学の構築にむけてII"パリティ. 15・2. 4-13 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 金子邦彦: "複雑系生命科学の構築にむけてIII"パリティ. 15・3. 21-25 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 金子邦彦: "複雑系としての生命システムの論理を求めて"物理学会誌. 55. 508-518 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 金子邦彦: "複雑系生命科学の問題"数理科学. 441. 28-36 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Kaneko: "Isologous Diversification for Robust Development of Cell Society"J.Theor.Biol.. 199. 243-256 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Fujimoto: "Noise Induced Boundary Dependence through Convective Instability"Physica D. 129. 203-222 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T.Yamamoto: "Tile Automaton : a model for an architecutre of a living system"Artificial Life. 5. 37-76 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T.Shibata: "Noiseless Colletive Motion our of Noisy Chaos"Phys.Rev.Lett.. 82. 4424-4427 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] N.Kataoka: "Functional Dynamics I"Physica D. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] N.Nakagawa: "Energy Storage in a Hamiltonian System in Partial Contact with a Heat Bath"J.Phys.Soc.Japan. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Kaneko: "Robust and Irreversible Development in Cell Society as a General Consequence of Intra-Inter Dynamics"Physica A. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Kaneko and I.Tsuda: "Complex Systems : Chaos and Beyond"A Constructive Approach with Applications in Life Sciences (Springer). 1-273 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Kaneko and C.Furusawa: "Robust and irreversible development in cell society as a general consequence of intra-inter dynamics"Physica A. 280. 23-33 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] C.Furusawa and K.Kaneko: "Origin of complexity in multicellular organisms"Phys.Rev.Lett.. 84. 6130-6133 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] C.Furusawa and K.Kaneko: "Theory of Robustness of Irreversible Differentiation in a Stem Cell System : Chaos Hypothesis"J.Theor.Biol.. (in press). (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Kaneko and T.Yomo: "Sympatric Speciation : compliance with phenotype diversification from a single genotype"Proc.Roy.Soc.B. 267. 2367-2373 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Takagi, K.Kaneko, and T.Yomo: "Evolution of genetic code through isologous diversification of cellular states"Artificial Life. 6 4. (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Fujimoto and K.Kaneko: "Sensitive boundary condition dependence of noise-sustained structure"Phys.Rev.E.. 63 4. (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] A.Togashi and K.Kaneko: "Digitality Induced Transition in a Small Autocatalytic System"Phys.Rev.Lett.. 86. 2459-2462 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] N.Kataoka and K.Kaneko: "Functional Dynamics I"Physica D. 138. 225-250 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] N.Kataoka and K.Kaneko: "Functional Dynamics II"Physica D. 149. 174-196 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] N.Kataoka and K.Kaneko: "Functional Dynamics for Natural Language"BioSystems. 57. 1-11 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] E.Akiyama and K.Kaneko: "Dynamical Systems Game Theory and Dynamics of Games"Physica D. 147. 221-258 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] A.Saito and K.Kaneko: "Inaccessibility and Undecidability in Computation, Geometry and Dynamical Systems"Physica D. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] N.Nakagawa and K.Kaneko: "Energy Absorption and Storage in a Hamiltonian System in Partial Contact with a Heat Bath"J.Phys.Soc.Japan. 69. 36-39 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] N,Nakagawa, K.Kaneko and T.S.Komatsu: "Long-term Relaxation of a Composite System in Partial Contact with a Heat Bath"J.Phys.Soc.Jpn. 69. 3214-3222 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] J.Ito and K.Kaneko: "Self-organized hierarchical structure in a plastic network of chaotic units"Neural Networks. 13. 275-281 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] N.B.Ouchi and K.Kaneko: "Coupled Map with Local and Global interactions"Chaos. 10. 359-365 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K Kaneko and T Yomo: "Sympatric Speciation from Interaction-induced Phenotype Differentiation"Proceedings of the Artificial Life VII conference (MIT press, ed.M Bedau et al.). 113-121 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] C Furusawa and K Kaneko: "Complex organization in multicellularity as a necessity in evolution"Proceedings of the Artificial Life VII conference (MIT press, ed.M Bedau et al.). 103-112 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H Takagi and K Kaneko: "Evolution of genetic code through isologous diversification of cellular states"Proceedings of the Artificial Life VII conference (MIT press, ed.M Bedau et al.). 122-131 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] E Akiyama, K Kaneko: "Social Dilemma and Dynamical Systems Game"Artificial Life VII conference (MIT press, ed.M Bedau et al.). 186-195 (2000)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2002-03-26  

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