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2003 Fiscal Year Final Research Report Summary

Genetic analysis of HIV/SIV and HTLV/STLV in Africa -Elucidation of Their Origins and Evolution

Research Project

Project/Area Number 12376002
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Virology
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

IDO Eiji  Kyoto University, Inst. for Virus Res., Instructor, ウイルス研究所, 助手 (70183176)

Co-Investigator(Kenkyū-buntansha) ICHIMURA Hiroshi  Kanazawa University, School of Medicine, Professor, 医学部, 教授 (10264756)
HAYAMI Masanori  Kyoto University, Inst. for Virus Res., Professor, ウイルス研究所, 教授 (40072946)
IBUKI Kentaro  Kyoto University, Inst. for Virus Res., Instructor, ウイルス研究所, 助手 (00273524)
TAKEHISA Jun  Kanazawa University, School of Medicine, Associate Prof., 医学部, 助教授 (90322114)
Project Period (FY) 2000 – 2003
KeywordsHIV / HTLV / STLV / genetic analysis / central Africa / AIDS / AIDS
Research Abstract

The two primate retrovirus groups, HIV/SIV and HTLV/STLV, are now known to be genetically related each other and constitute a huge viral superfamily. Accumulated knowledges on the genetical analyses and the way of transmission of these two viral groups indicated that both groups appear to have been transmitting zoonotically. To elucidate the origins and evolution of these two virus groups, we conducted serosurveys and phylogenetic analyses of these viruses among AIDS patients, healthy persons, and Pygmy people, an ethnic minority in Central Africa (Cameroon, Republic of Congo, and Democratic Republic of Congo).
Seroprevalece of Pygmies was unexpectedly low, and the viruses, if any, were considered to have been transmitted from neighboring Bantu residents judged from genetic data of the isolated ones. Detailed genetic analyses of HIV-1 from AIDS patients have revealed that the viral genomes are not only highly diversified but also frequently mosaic, which means that the genomes are mostly recombinant forms. From the survey among various monkey species, we firstly isolated a new SIV from black mangabeys captured in Democratic Republic of Congo. The phylogenetic position of this virus (SIVblm) is very unique, and interestingly a part of its pol genomic region (RnaseH) is genetically very close to that of the Ant strain, one of the oldest HIV 1 strain, suggesting that the genome of present HIV 1 might be mosaic and its origin is partly from this monkey species.

  • Research Products

    (12 results)

All Other

All Publications (12 results)

  • [Publications] Bikandou, B., Takehisa, J., et al.: "genetic subtypes of HIV type 1 in Republic of Congo."AIDS Res.Hum. Retroviruses. 16(7). 613-619 (2000)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Takehisa, J., Harada, Y., et al.: "Natural infection of wild-born mandrills (Mandrillus sphinx) with two different types of simian immunodeficiency virus."AIDS Res.Hum. Retroviruses. 17(12). 1143-1154 (2001)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Takemura, Y., Yamashita, M., et al.: "High prevalence of simian T-lymphotropic virus type L in wild Ethiopian baboons."J.Virol.. 76. 1642-1648 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Taniguchi, Y., Takehisa, J., et al.: "genetic subtypes of HIV type 1 based on the vpu/env sequences in the Republic of Congo Brazzaville."AIDS Res.Hum. Retroviruses. 18(1). 79-83 (2002)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ndembi, N., Yumo, H., et al.: "HIV type 1 infection in Pygmy hunter gatherers is from contact with bantu rather than from nonHuman primates"AIDS Res.Hum.Retroviruses. 19(5). 441-445 (2003)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ndembi, N., Takehisa, H., et al.: "Genetic diversity of HIV type 1 in rural eastern Cameroon."J.Acq.Immun.Def.Synd.. (in press).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Bikandou, B., Takehisa, J., Mboudjeka, I., Ido, E., Kuwata, T., Miyazaki, Y., Moriyama, H., Harada, Y., Taniguchi, Y., Ichimura, H., Ikeda, M., Ndolo, P.J., Nzoukoudi, M.Y., M'Vouenze, R., M'Pandi, M., Parra, H.J., M'Pele, P., Hayami, M.: "Genetic subtypes of HIV type 1 in republic of Congo"AIDS Res.Hum.Retroviruses. 16(7). 613-619 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Takehisa, J., Harada, Y., Ndembi N., Mboudjeka, I., Taniguchi, Y., Ngansop, C :, Kuate, S., Zekeng, L., Ibuki, K., Shimada, T., Bikandou, B., Yamaguchi-Kabata, Y., Miura, T., Ikeda, M., Ichimura, H., Kaptue, L., Hayami, M: "Natural infection of wild-born mandrills (Mandrillus sphinx) with two different types of simian immunodeficiency virus"AIDS Res.Hum.Retroviruses. 17. 1143-1154 (2001)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Takemura, T., Yamashita, M., Shimada, M., Ohkura, S., Shotake, T., Ikeda, M., Miura, T., Hayami, M.: "High prevalence of simian T-lymphotropic virus type L in wild Ethiopian Baboons"J.Virol.. 76. 1642-1648 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Taniguchi, Y., Takehisa, J., Bikandou, B., Mbudjeka, I., Nzouloudi, M., M'Vouenze, R., Obengui, M'pele, P., Harada, Y., Ido, E., Hayami, M., Ichimura, H., Parra, H.: "Genetic subtypes of HIV type 1 based on the vpu/env sequences in Republic of Congo-Brazzaville"AIDS Res.Hum.Retroviruses. 18. 79-83 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ndembi, N., Yumo, H., Takehisa, J., Takemura, T., Kobayashi, E., Ngansop, C., Songok,.E., Miura, T., Ido, E., Hayami, M., Kaptue, L., Ichimura, H.: "HIV type 1 infection in Pygmy hunter gatherers is from contact with Bantu rather than from nonhuman primates"AIDS Res.Hum.Retroviruses. 19. 441-445 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ndembi, N., Takehisa, J., Zekeng, L., Kobayashi, E., Ngansop, C., Songok, E.M., Takemura, T., Ido, E., Hayami, M., Kaptue, L., Ichimura, H.: "Genetic Diversity of HIV Type 1 in Rural Eastern Cameroon"J.Acq.Immun.Def.Synd.. (in press).

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 2005-04-19  

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