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2004 Fiscal Year Final Research Report Summary

Highly Efficient Synthesis of Artificial Nucleic Acids Having New Functions

Research Project

Project/Area Number 13132203
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Science and Engineering
Research InstitutionThe University of Tokyo

Principal Investigator

WADA Takeshi  The University of Tokyo, Graduate School of Frontier Sciences, Associate Professor, 大学院新領域創成科学研究科, 助教授 (90240548)

Project Period (FY) 2001 – 2004
KeywordsBoranophosphate DNA / Phosphorothioate DAN / Antisense DNA / Artificial nucleic acids / Stereocontrolled synthesis / Oligonucleotide synthesis / Solid-phase synthesis / Oligonucleotide therapeutics
Research Abstract

New methods for the highly efficient synthesis of artificial nucleic acids, which are useful as drugs or functional materials, were developed. Boranophosphate DNAs are regarded as potentially useful antisense molecules or stable nucleic acid-based functional materials. We developed a new method for the synthesis of the boranophosphate DNAs on the basis of a new boranophosphorylation reaction (boranophosphotriester approach). We also developed a new reaction for the transformation of the boranophosphate DNAs into the corresponding H-phosphonate DNAs, which are useful intermediates for the synthesis of a wide variety of backbone-modified DNA analogs. Among these DNA analogs, phosphorothioate DNAs are most widely used for antisense drugs to date. However, the currently used phosphorothioate DNAs are random mixtures of diastereomers owing to the phosphorous chirality. We developed a new method for the stereocontrolled synthesis of phosphorothioate DNAs by the use of nucleoside 3'-oxazaphospholidine derivatives as monomers (oxazaphospholidine approach). The method was successfully applied to the stereocontrolled synthesis of phosphorothioate RNAs as well as other backbone-modified nucleic acid analogs.

  • Research Products

    (21 results)

All 2005 2004 2003 2002

All Journal Article (19 results) Patent(Industrial Property Rights) (2 results)

  • [Journal Article] Stereocontrolled synthesis of phosphorothioate DNA by the oxazaphospholidine approach.2005

    • Author(s)
      Wada, T.
    • Journal Title

      Front. Org. Chem. 1

      Pages: 41-61

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] A Novel Method for the Synthesis of Dinucleoside Boranophosphates by a Boranophosohotriester Method2004

    • Author(s)
      Shimizu, M.et al.
    • Journal Title

      J.Org.Chem. 69

      Pages: 5261-5268

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] A novel method for the synthesis of dinucleoside boranophosphates by a boranophosohotriester method2004

    • Author(s)
      Shimizu, M. et al.
    • Journal Title

      J. Org. Chem 69

      Pages: 5261-5268

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] BH3 as a protecting group for phosphonic acids : a novel method for the synthesis of dinucleoside H-phosphonates.2004

    • Author(s)
      Shimizu, M. et al.
    • Journal Title

      Tetrahedron Lett. 45

      Pages: 371-374

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Oligoribonucleotide synthesis by the use of 1-(2-cyanoethoxy)ethyl (CEE) as a 2'-hydroxy protecting group.2004

    • Author(s)
      Umemoto, T. et al.
    • Journal Title

      Tetrahedron Lett. 45

      Pages: 9529-9531

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] An Oxazaphospholidine Approach for the Stereocontrolled Synthesis of Oligonucleoside Phosphnrothioates2003

    • Author(s)
      Oka, N.et al.
    • Journal Title

      J.Am.Chem.Soc. 125

      Pages: 8307-8317

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] BH_3 as a Protecting Group for Phosphonic Acids : A Novel Method for the Synthesis of Dinucleoside H-Phosphonates2003

    • Author(s)
      Shimizu, M.et al.
    • Journal Title

      Tetrahedron Lett. 45

      Pages: 371-374

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Solid-phase Synthesis of a Novel Polyester Analog of Nucleic Acid Bearing Serine Backbone2003

    • Author(s)
      Wada, T. et al.
    • Journal Title

      Peptide Science 40

      Pages: 159-150

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Synthesis of Chiral Oligopeptides which Recognize Double-stranded DNAs2003

    • Author(s)
      Wada, T. et al.
    • Journal Title

      Peptide Science 40

      Pages: 181-182

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] An Oxazaphospholidine Approach for the Stereocontrolled Synthesis of Oligonucleoside Phosphorothioates2003

    • Author(s)
      Oka, N
    • Journal Title

      J. Am. Chem. Soc. 125

      Pages: 8307-8317

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Diastereocontrolled Synthesis of Phosphorothioate DNA via an Oxaza- phospholidine Approach Using a Novel Class of Activators, Dialkyl(cya- nomethyl)ammonium salts2003

    • Author(s)
      Oka, N. etal.
    • Journal Title

      Nucleosides, Nucleotides, Nucleic Acids 22

      Pages: 1141-1143

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Reaction Mechanism for the Sterercontrolled Synthesis of Phosphorothio- ate DNA by the Oxazaphospholidine Approach2003

    • Author(s)
      Wada, T. et al.
    • Journal Title

      Nucleosides, Nucleotides, Nucleic Acids 222

      Pages: 1471-1473

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Synthesis of Dinucleoside Boranophosphates by a Boranophosphotriester Approach2003

    • Author(s)
      Wada, T., et al.
    • Journal Title

      Nucleosides, Nucleotides, Nucleic Acids 22

      Pages: 1431-1433

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Diastereocontrolled Synthesis of Dinucleoside Phosphorothioates Using a Novel Activators, Dialkyl(cyanomethyl) ammonium Tetrafluoroborates2002

    • Author(s)
      Oka, N.et al.
    • Journal Title

      J.Am.Chem.Soc. 124

      Pages: 4962-4963

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] A New Boranophosphorylation Reaction for the Synthesis of Deoxyribonucleoside Boranophosphates2002

    • Author(s)
      Wada, T.et al.
    • Journal Title

      Tetrahedron Lett. 43

      Pages: 4137-4140

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Oligoribonucleotide Synthesis by the Use of 1-(2-Cyanoethoxy)ethyl (CEE) as a 2'-Hydroxy Protecting Group2002

    • Author(s)
      Umemoto, T. et al.
    • Journal Title

      Tetrahedron Lett. 45

      Pages: 9529-9531

    • Description
      「研究成果報告書概要(和文)」より
  • [Journal Article] Diastereocontrolled Synthesis of Dinucleoside Phosphorothioates Using a Novel Activators, Dialkyl(cyanomethyl)ammonium Tetrafluoroborates2002

    • Author(s)
      Oka, N.et al.
    • Journal Title

      J. Am. Chem. Soc. 124

      Pages: 4962-4963

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] A New Boranophosphorylation Reaction for the Synthesis of Deoxyribo- nucleoside Boranophosphates2002

    • Author(s)
      Wada, T. et al.
    • Journal Title

      Tetrahedron Lett. 43

      Pages: 4137-4140

    • Description
      「研究成果報告書概要(欧文)」より
  • [Journal Article] Taurine as a Constituent of Mitochondrial tRNAs : New Insight into the Functions of Taurine and Human Mitochondrial Diseases2002

    • Author(s)
      Suzuki, T. et al.
    • Journal Title

      EMBO J. 21

      Pages: 6581-6589

    • Description
      「研究成果報告書概要(欧文)」より
  • [Patent(Industrial Property Rights)] 立体規則性の高いリボヌクレオチド類縁体の製造法2004

    • Inventor(s)
      和田 猛, 西郷 和彦, 岡 夏央
    • Industrial Property Rights Holder
      東京大学TLO
    • Industrial Property Number
      特願2004-089152
    • Filing Date
      2004-03-25
    • Description
      「研究成果報告書概要(和文)」より
  • [Patent(Industrial Property Rights)] ホラノホスフェートモノマーおよびそれを用いたオリゴヌクレオチドの製造法2004

    • Inventor(s)
      和田 猛, 西郷 和彦, 清水 護
    • Industrial Property Rights Holder
      東京大学TLO
    • Industrial Property Number
      特願2004-061617
    • Filing Date
      2004-03-05
    • Description
      「研究成果報告書概要(和文)」より

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Published: 2008-05-27  

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