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2017 Fiscal Year Annual Research Report

Single particle cryoEM of mammalian FoF1 ATP synthase

Research Project

Project/Area Number 17H03647
Research InstitutionOsaka University

Principal Investigator

Gerle Christoph  大阪大学, たんぱく質研究所, 特任准教授(常勤) (10561970)

Project Period (FY) 2017-04-01 – 2020-03-31
KeywordsFoF1 ATP synthase / mitochondria / bioenergetics / single particle cryo-EM / structural biology / membrane biology / proton transport / rotary ATPase
Outline of Annual Research Achievements

For advancing our understanding of mammalian FoF1 ATP synthase structure and function at the atomic level via structural analysis by single particle cryo-EM the following experimental results were achieved during the first year of this Kiban B project:

(1) To circumvent the destabilization of the complex by contact with column resing through the loss of native bound lipids such as cardiolipin we are establishing a column free purification procedure. Initial success has been found and progress looks promising for future improvements of conditions recently found.
(2) We have succeeded to solubilize large amounts of the mammalian FoF1 ATP synthase without compromising the complexes’ stability by optimizing the composition and amount of novel detergents.
(3) Testing of many differenct freezing conditions allowed us find cryo-grid specimen preparation approaches that do not destruct the highly fragile mammalian FoF1 ATP synthase.

Current Status of Research Progress
Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

Challenges in large scale purifications are becoming solvable, which is also true for technical issues in image data acquisition.

Strategy for Future Research Activity

Conformational flexibility is a major obstacle for structural characterization by any method and this is also true for single particle cryo-EM. To mitigate this in the case of rotary ATP synthases serious problem we will aim to establish purification procedures that keep physiological bound IF1 bound to the complex during the isolation procedure.

The fact that mitochondrial FoF1 ATP synthase exists in oligomeric form in the inner mitochondrial membrane complicates structural analysis. We will establish efficient protocols for the large separation of the different oligomeric forms and analyze them separately.

  • Research Products

    (7 results)

All 2018 2017 Other

All Journal Article (1 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results) Presentation (5 results) (of which Int'l Joint Research: 1 results,  Invited: 5 results) Remarks (1 results)

  • [Journal Article] RAZA: A Rapid 3D z-crossings algorithm to segment electron tomograms and extract organelles and macromolecules2017

    • Author(s)
      Ali Rubbiya A.、Mehdi Ahmed M.、Rothnagel Rosalba、Hamilton Nicholas A.、Gerle Christoph、Landsberg Michael J.、Hankamer Ben
    • Journal Title

      Journal of Structural Biology

      Volume: 200 Pages: 73~86

    • DOI

      10.1016/j.jsb.2017.10.002

    • Peer Reviewed / Int'l Joint Research
  • [Presentation] GraDeR: detergent free membrane protein preparation.2018

    • Author(s)
      Christoph Gerle
    • Organizer
      Oxford Talks
    • Invited
  • [Presentation] 哺乳動物F-ATP合成酵素はptp?2017

    • Author(s)
      Christoph Gerle
    • Organizer
      日本生体エネルギー研究会第43回討論会
    • Invited
  • [Presentation] Cryo-EM 2.02017

    • Author(s)
      Christoph Gerle
    • Organizer
      ConBio
    • Invited
  • [Presentation] The intermembrane space domain of mammalian FoF1 ATP synthase and its potential role in ptp formation.2017

    • Author(s)
      Christoph Gerle
    • Organizer
      Cold Spring Harbor Asia conference on Mitochondria
    • Int'l Joint Research / Invited
  • [Presentation] GraDeR: micelle free membrane protein preparation.2017

    • Author(s)
      Christoph Gerle
    • Organizer
      The 55th Annual Meeting of Biophysical Society of Japan
    • Invited
  • [Remarks] GraDeR

    • URL

      https://grader-protocol.com/

URL: 

Published: 2018-12-17  

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