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2012 Fiscal Year Final Research Report

Construction of DNA database and analysis of genetic background of behavior in endangered wild animals.

Research Project

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Project/Area Number 21310150
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Resource conservation science
Research InstitutionKyoto University

Principal Investigator

MURAYAMA Miho  京都大学, 野生動物研究センター, 教授 (60293552)

Co-Investigator(Kenkyū-buntansha) NAKAMURA Michio  京都大学, 野生動物研究センター, 准教授 (30322647)
KOSHIMA Shiro  京都大学, 野生動物研究センター, 教授 (60183802)
IDANI Genichi  京都大学, 野生動物研究センター, 教授 (70396224)
INOUE Eiji  京都大学, 理学(系)研究科(研究院), 助教 (70527895)
TANAKA Masayuki  京都大学, 野生動物研究センター, 准教授 (80280775)
SUGIURA Hideki  京都大学, 野生動物研究センター, 准教授 (80314243)
MORIMURA Naruki  京都大学, 霊長類研究所, 助教 (90396226)
Project Period (FY) 2009 – 2012
Keywords遺伝資源保全 / 野生動物 / 血縁解析 / 遺伝子多様性
Research Abstract

In this study we developed DNA Zoo consisting of many samples from various endangered species with precise individual information through collaboration with keeping facilities and field stations. The DNA Zoo is used for genotype analysis for conservation issue. We non-invasively collected DNA in the field, and compared each sample’s, genotype of candidate genes for stress susceptibility and observed data of personality/behavior/cognition. By using this result we are developing behavior-prediction system of animals kept in zoo by genotyping. The information will be useful for their welfare by reducing stress.

  • Research Products

    (47 results)

All 2013 2012 2011 2010 2009 Other

All Journal Article (39 results) (of which Peer Reviewed: 39 results) Presentation (7 results) Remarks (1 results)

  • [Journal Article] Development of microsatellite markers for blue duikers (Cephalophus monticola) using next-generation sequencing and cross-amplification in other duikers.2013

    • Author(s)
      Akomo-Okoue EF, Inoue E, Adenyo C,Hayano A, Inoue-Murayama M
    • Journal Title

      Conservation Genetics Resources

    • DOI

      DOI:10.1007/s12686-013-9906-8

    • Peer Reviewed
  • [Journal Article] Dopamine receptor D4 gene (DRD4) is associated with gazing toward humans in domestic dogs (Canis familiaris).2013

    • Author(s)
      Hori Y, Kishi H, Inoue-Murayama M, and Fujita K
    • Journal Title

      Open Journal of Animal Sciences

      Volume: 3 Pages: 54-58

    • DOI

      DOI:10.4236/ojas.2013.31008

    • Peer Reviewed
  • [Journal Article] Using next generation sequencing to develop Microsatellite Markers for Endangered Grevy's Zebra (Equus grevyi).2013

    • Author(s)
      Ito H, Hayano A, Langenhorst T, Sakamoto H, Inoue-Murayama M
    • Journal Title

      Conservation Genetics Resources

      Volume: 5 Pages: 507-510

    • DOI

      DOI:10.1007/s12686-012-9839-7

    • Peer Reviewed
  • [Journal Article] DNA polymorphism within LDH-A gene in pigeon (Columba livia).2013

    • Author(s)
      Ramadan S, Miyake T, Yamaura J, Inoue-Murayama M
    • Journal Title

      The Journal of Poultry Science

      Volume: (in press)

    • DOI

      DOI:10.2141/jpsa.0120137

    • Peer Reviewed
  • [Journal Article] Intronic VNTR polymorphism in a paralog of chicken serotonin transporter gene.2013

    • Author(s)
      Abe H, Takeuchi H, Yamada S, Nakamura A, Nagao K, Hayakawa H, Nirasawa K, Ito S,Inoue-Murayama M
    • Journal Title

      Animal Science Journal

      Volume: 84 Pages: 281-288

    • DOI

      DOI:10.1111/asj.12011.

    • Peer Reviewed
  • [Journal Article] Isolation and characterization of microsatellite loci in the invasive herb Solidago altissima (Asteraceae).2013

    • Author(s)
      Sakata Y, Kaneko S, Hayano A, Inoue-Murayama M, Ohgushi T, Isagi Y
    • Journal Title

      Applications in Plant Sciences

      Volume: 1(4) Pages: 1200313

    • URL

      http://dx.doi.org/10.3732/apps.1200313

    • Peer Reviewed
  • [Journal Article] Personality assessment and its association with genetic factors in captive Asian and African elephants .2013

    • Author(s)
      Yasui S, Konno A, Tanaka M, Idani G, Ludwig A, Lieckfeldt D, Inoue-Murayama M
    • Journal Title

      Zoo Biology

      Volume: 32(1) Pages: 70-78

    • DOI

      DOI:10.1002/zoo.21045

    • Peer Reviewed
  • [Journal Article] Mammalian fauna of the miombo forest in the Ugalla area, Western Tanzania.2013

    • Author(s)
      Iida GE, Ogawa H, Idani G
    • Journal Title

      African Study Monographs

      Volume: 33(4) Pages: 253-270

    • URL

      http://hdl.handle.net/2433/169670

    • Peer Reviewed
  • [Journal Article] Gene flow and genetic diversity of chimpanzees in Tanzanian habitats.2013

    • Author(s)
      Inoue E, Tashiro Y, Ogawa H,Inoue-Murayama M, Nishida T, Takenaka O
    • Journal Title

      Primate Conservation

      Volume: 26 Pages: 67-74

    • URL

      http://dx.doi.org/10.1896/052.026.0105

    • Peer Reviewed
  • [Journal Article] Development of Microsatellite Markers for Cynops ensicauda (Amphibia: Caudata) by Using Next-generation Sequencing Technology.2012

    • Author(s)
      Mochida K, Inoue-E, Kurita K, Hayano A, Inoue-Murayama M
    • Journal Title

      Current Herpetology

      Volume: 31(2) Pages: 117-120

    • URL

      http://dx.doi.org/10.5358/hsj.31.117

    • Peer Reviewed
  • [Journal Article] Efficient establishment of primary fibroblast cultures from the hawksbill sea turtle (Eretmochelys imbricata).2012

    • Author(s)
      Fukuda T, Kurota J, Saito T, Yusasa K,Kurita M, Donai K, Nitto H, Soichi M,Nishimori K, Uchida T, Isogai E, Onuma M, Sone H, Seko N, Inoue-Murayama M
    • Journal Title

      In Vitro Cellular & Developmental Biology - Animal

      Volume: 48 Pages: 660-665

    • DOI

      DOI:10.1007/s11626-012-9565-1.

    • Peer Reviewed
  • [Journal Article] Human-Specific SNP in Obesity Genes, Adrenergic Receptor Beta2 (ADRB2), Beta3 (ADRB3), and PPAR γ2 (PPARG), during Primate Evolution.2012

    • Author(s)
      Takenaka A, Nakamura S, Mitsunaga F, Inoue-Murayama M, Udono T, Suryobroto B
    • Journal Title

      PLoS One.

      Volume: 7(8) Pages: e43461

    • DOI

      DOI:10.1371/journal.pone.0043461

    • Peer Reviewed
  • [Journal Article] A comparative analysis of Y chromosome and mtDNA phylogenies of the Hylobates gibbons.2012

    • Author(s)
      Chan YC, Roos C, Inoue-Murayama M, Inoue E, Shih CC, Vigilant L
    • Journal Title

      BMC Evol Biol.

      Volume: 12(1) Pages: 150

    • DOI

      DOI:10.1186/1471-2148-12-150.

    • Peer Reviewed
  • [Journal Article] Development of microsatellite markers for grasscutter (Thryonomys swinderianus, RODENTIA) using next-generation sequencing technology.2012

    • Author(s)
      Adenyo C, Hayano A, Inoue E, Kayang BB, Inoue-Murayama M
    • Journal Title

      Conservation Genetics Resources

      Volume: 4(4) Pages: 1011-1014

    • DOI

      DOI:10.1007/s12686-012-9695-5

    • Peer Reviewed
  • [Journal Article] Evaluation of genetic diversity and conservation priorities for Egyptian chickens.2012

    • Author(s)
      Ramadan S, Kayang BB, Inoue E, Nirasawa K, Hayakawa H, Ito S, Inoue-Murayama M
    • Journal Title

      Open Journal of Animal Sciences

      Volume: 2 Pages: 183-190

    • DOI

      DOI:10.4236/ojas.2012.23025

    • Peer Reviewed
  • [Journal Article] Development of microsatellite markers for the Japanese giant salamander (Andrias japonicus) through next-generation sequencing, and cross-amplification in its congener.2012

    • Author(s)
      Yoshikawa N, Matsui M, Hayano A, Inoue-Murayama M
    • Journal Title

      Conservation Genetics Resources

      Volume: 4 Pages: 971-974

    • DOI

      DOI:10.1007/s12686-012-9685-7

    • Peer Reviewed
  • [Journal Article] Evidence for a 'Midlife Crisis' in Great Apes Consistent with the U-Shape in Human Well-Being.2012

    • Author(s)
      Weiss A, King JE, Inoue-Murayama M, Matsuzawa T, Oswald AJ
    • Journal Title

      PNAS

      Volume: 109 (49) Pages: 19949-52

    • DOI

      DOI:10.1073/pnas.1212592109

    • Peer Reviewed
  • [Journal Article] All too human? Chimpanzee and orang-utan personalities are not anthropomorphic projections.2012

    • Author(s)
      Weiss A, Inoue-Murayama M, King JE, Adams MJ, Matsuzawa T
    • Journal Title

      Animal Behaviour

      Volume: 83 Pages: 1355-1365

    • URL

      http://dx.doi.org/10.1016/j.anbehav.2012.02.024

    • Peer Reviewed
  • [Journal Article] Development of microsatellite markers for the endangered grassland species Vincetoxicum pycnostelma (Apocynaceae) by using next-generation sequencing technology.2012

    • Author(s)
      Nakahama N, Kaneko S, Hayano A, Isagi Y, Inoue-Murayama M, Tominaga T
    • Journal Title

      Conservation Genetics Resources

      Pages: 669-671

    • DOI

      DOI:10.1007/s12686-012-9619-4

    • Peer Reviewed
  • [Journal Article] Genetic variation in the C-terminal domain of arginine vasotocin receptor in avian species.2012

    • Author(s)
      Abe H, Watanabe Y, Inoue-Murayama M
    • Journal Title

      Gene

      Volume: 494 Pages: 174-180

    • URL

      http://dx.doi.org/10.1016/j.gene.2011.12.019

    • Peer Reviewed
  • [Journal Article] Forensic species identification of large macaws using DNA barcodes and microsatellite profiles.2012

    • Author(s)
      Abe H, Hayano A, Inoue-Murayama M
    • Journal Title

      Mol Biol Rep

      Volume: 39 Pages: 693-699

    • DOI

      DOI:10.1007/s11033-011-0787-1

    • Peer Reviewed
  • [Journal Article] Dr. Julius Keyyu Visits WRC2012

    • Author(s)
      Idani G
    • Journal Title

      Pan African News

      Volume: 19 (1) Pages: 11-12

    • URL

      http://hdl.handle.net/2433/157935

    • Peer Reviewed
  • [Journal Article] Polymorphism of the tryptophan hydroxylase 2 (TPH2) gene is associated with chimpanzee neuroticism.2011

    • Author(s)
      Hong KW, Weiss A, Morimura N, Udono T, Hayasaka I, Humle T, Murayama Y, Ito S, Inoue-Murayama M
    • Journal Title

      PLoS One.

      Volume: 6 Pages: e22144

    • DOI

      DOI:10.1371/journal.pone.0022144

    • Peer Reviewed
  • [Journal Article] Androgen receptor gene polymorphisms are associated with aggression in Japanese Akita Inu.2011

    • Author(s)
      Konno A, Inoue-Murayama M, Hasegawa T.
    • Journal Title

      Biol Lett.

      Volume: 7(5) Pages: 658-660

    • DOI

      DOI:10.1098/rsbl.2011.0087

    • Peer Reviewed
  • [Journal Article] Polymorphisms in the Extracellular Region of Dopamine Receptor D4 within and among Avian Orders.2011

    • Author(s)
      Abe H, Ito S, Inoue-Murayama M
    • Journal Title

      Journal of Molecular Evolution

      Volume: 72 Pages: 253-264

    • DOI

      DOI:10.1007/s00239-011-9432-9

    • Peer Reviewed
  • [Journal Article] Analysis of genetic diversity of Egyptian pigeon breeds.2011

    • Author(s)
      Ramadan S, Abe H, Hayano A, Yamaura J, Tomoaki Onoda T, Miyake T, Inoue-Murayama M
    • Journal Title

      The Journal of Poultry Science

      Volume: 48 Pages: 79-84

    • URL

      http://dx.doi.org/10.2141/jpsa.010109

    • Peer Reviewed
  • [Journal Article] Genetic and 'cultural' similarity in wild chimpanzees.2011

    • Author(s)
      Langergraber KE, Boesch C, Inoue E, Inoue-Murayama M, Mitani JC, Nishida T, Pusey A, Reynolds V, Schubert G, Wrangham RW, Wroblewski E, Vigilant L
    • Journal Title

      Proc Biol Sci.

      Volume: 278 Pages: 408-416

    • DOI

      DOI:10.1098/rspb.2010.1112

    • Peer Reviewed
  • [Journal Article] Human endogenous retrovirus K14C drove genomic diversification of the Y chromosome during primate evolution.2010

    • Author(s)
      Sin HS, Koh E, Kim DS, Murayama M, Sugimoto K, Maeda Y, Yoshida A, Namiki M.
    • Journal Title

      J Hum Genet.

      Volume: 55 Pages: 717-725

    • DOI

      DOI:10.1038/jhg.2010.94

    • Peer Reviewed
  • [Journal Article] Mitochondrial Genome Sequences Effectively Reveal the Phylogeny of Hylobates Gibbons.2010

    • Author(s)
      Chan Y-C, Roos C, Inoue-Murayama M, Inoue E, Shih C-C, Pei K J-C, Vigilant L
    • Journal Title

      PLOS ONE

      Pages: e14419

    • DOI

      DOI:10.1371/journal.pone.0014419

    • Peer Reviewed
  • [Journal Article] Functional uniqueness of a small carnivore as seed dispersal agents: a case s Inoue-Murayama M tudy of the common palm civets in the Tabin Wildlife Reserve, Sabah, Malaysia.2010

    • Author(s)
      Nakashima Y, Inoue E, Inoue-Murayama M, Abd Sukor JR
    • Journal Title

      Oecologia

      Volume: 164 Pages: 721-730

    • DOI

      DOI:10.1007/s00442-010-1714-1

    • Peer Reviewed
  • [Journal Article] High potential of a disturbance-tolerant frugivore, the common palm civet Paradoxurus hermaphrodites (Viverridae), as a seed disperser for larger-seeded plants.2010

    • Author(s)
      Nakashima Y, Inoue E, Inoue-Murayama M, Sukor JA
    • Journal Title

      Mammal Study

      Volume: 35 Pages: 209-215

    • URL

      http://dx.doi.org/10.3106/041.035.0307

    • Peer Reviewed
  • [Journal Article] Genetic Diversity of Helmeted Guineafowl (Numida meleagris) Based on Microsatellite Analysis.2010

    • Author(s)
      Kayang BB, Youssao I, Inoue E, Naazie A, Abe H, Ito S, Inoue-Murayama, M
    • Journal Title

      Japan Poultry Science

      Volume: 47 Pages: 120-124

    • URL

      http://dx.doi.org/10.2141/jpsa.009103

    • Peer Reviewed
  • [Journal Article] The "silver" Japanese quail and the MITF gene: causal mutation, associated traits and homology with the "blue" chicken plumage.2010

    • Author(s)
      Minvielle F, Bed'hom B, Coville JL, Ito S, Inoue-Murayama M, Gourichon D
    • Journal Title

      BMC Genet

      Volume: 11 Pages: 15

    • DOI

      DOI:10.1186/1471-2156-11-15

    • Peer Reviewed
  • [Journal Article] Allele distribution and effect on reporter gene expression of vasopressin receptor gene (AVPR1a)-linked VNTR in primates.2009

    • Author(s)
      Hong K-W, Matsukawa R, Hirata Y, Hayasaka I, Murayama Y, Ito S,Inoue-Murayama M
    • Journal Title

      Journal of Neural Transmission

      Volume: 116 Pages: 535-538

    • DOI

      DOI:10.1007/s00702-009-0219-8

    • Peer Reviewed
  • [Journal Article] Association analysis between canine behavioural traits and genetic polymorphisms in the Shiba Inu breed.2009

    • Author(s)
      Takeuchi, Y, Kaneko F, Hashizume C, Masuda K, Ogata N, Maki T,Inoue-Murayama M, Hart B L, Mori Y
    • Journal Title

      Anim. Genet.

      Volume: 40 Pages: 616-622

    • DOI

      DOI:10.1111/j.1365-2052.2009.01888.x

    • Peer Reviewed
  • [Journal Article] Assessing Chimpanzee Personality and Subjective Well-Being in Japan2009

    • Author(s)
      Weiss A, Inoue-Murayama M, Hong K-W, Inoue E, Udono T, Ochiai T, Matsuzawa T, Hirata S, King JE
    • Journal Title

      Am. J. Primatol.

      Volume: 71 Pages: 283-292

    • DOI

      DOI:10.1002/ajp.20649

    • Peer Reviewed
  • [Journal Article] An approach to canine behavioural genetics employing guide dogs for the blind.2009

    • Author(s)
      Takeuchi Y, Hashizume C, Arata S, Inoue-Murayama M, Maki T, Hart BL, Mori Y
    • Journal Title

      Anim. Genet.

      Volume: 40 Pages: 217-224

    • DOI

      DOI:10.1111/j.1365-2052.2008.01823.x

    • Peer Reviewed
  • [Journal Article] Genetic polymorphism as a background of animal behavior (review).2009

    • Author(s)
      Inoue-Murayama M
    • Journal Title

      Anim. Sci. J.

      Volume: 80 Pages: 113-120

    • DOI

      DOI:10.1111/j.1740-0929.2008.00623.x

    • Peer Reviewed
  • [Journal Article] Characterization of nineteen microsatellite markers for the Japanese clouded salamander, Hynobius nebulosus, using the NGS.

    • Author(s)
      Yoshikawa N, Matsui M, Inoue-Murayama M
    • Journal Title

      Conservation Genetics Resources

      Volume: (in press)

    • DOI

      DOI:10.1007/s12686-013-9861-4

    • Peer Reviewed
  • [Presentation] Intra-species differences in tolerance and genetic polymorphisms in Japanese macaques (Macaca fuscata) Symposium "Beyond the back cross: Recent research on the genetics of nonhuman animal behavior" by Alexander Weiss and Miho Inoue-Murayama.2012

    • Author(s)
      Yamada K, Inoue-Murayama M
    • Organizer
      The 2012 Behavior Genetics Association meeting
    • Place of Presentation
      Edinburgh, UK.
    • Year and Date
      20120622-25
  • [Presentation] The association between copy number variants in chicken chromoome 1 and tonic immobility. Symposium "Beyond the back cross: Recent research on the genetics of nonhuman animal behavior" by Alexander Weiss and Miho Inoue-Murayama.2012

    • Author(s)
      Abe H, Nagao K, Nakamura A, Inoue-Murayama M
    • Organizer
      The 2012 Behavior Genetics Association meeting
    • Place of Presentation
      Edinburgh, UK.
    • Year and Date
      20120622-25
  • [Presentation] ニワトリ第1染色体におけるコピー数多型と緊張性不動との関連解析2012

    • Author(s)
      阿部秀明、長尾健二、中村明弘、 村山美穂
    • Organizer
      分子生物学会 35回大会
    • Place of Presentation
      福岡
    • Year and Date
      2012-12-13
  • [Presentation] Genetic analysis of grasscutter in Ghana.2012

    • Author(s)
      Adenyo C, Hayano A, Kayang BB, OwusuEH, Inoue E, Inoue-Murayama M
    • Organizer
      Special Seminar: Conservation and Sustainable Use of Ghanaian Wildlife: Summary and Future Plan.
    • Place of Presentation
      京都
    • Year and Date
      2012-09-27
  • [Presentation] The signal function of feces to other individuals in the feral cats.2012

    • Author(s)
      Tani A, Ishihara A, Kasuya E, Inoue-Murayama M
    • Organizer
      The 5^<th> EAFES International Congress
    • Place of Presentation
      大津
    • Year and Date
      2012-03-19
  • [Presentation] Personality assessment and factors influencing personality in captive elephants.2011

    • Author(s)
      Yasui S, Konno A, Tanaka M, Idani G, Inoue-Murayama M
    • Organizer
      2011 International Elephant and Rhino Conservation and Research Symposium
    • Place of Presentation
      Rotterdam, The netherland
    • Year and Date
      20111010-14
  • [Presentation] Phylogenetic analyses and mitochondrial gene evolution of the gibbon taxa based on the complete mitochondrial genome sequences.2009

    • Author(s)
      Chan Y-C, Christian Roos C, Inoue-Murayama M, Inoue E, Shih C-C, Pei K. J-C, Vigilant L
    • Organizer
      ESEB 12th Congress
    • Place of Presentation
      Torino, Italy.
    • Year and Date
      20090824-29
  • [Remarks]

    • URL

      http://miho-murayama.sakura.ne.jp/

URL: 

Published: 2014-08-29  

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