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2012 Fiscal Year Final Research Report

Protein interaction analysis of circadian clock protein

Research Project

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Project/Area Number 22370037
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Structural biochemistry
Research InstitutionKyoto University

Principal Investigator

NAKATSU Toru  京都大学, 大学院・薬学研究科, 准教授 (50293949)

Project Period (FY) 2010 – 2012
Keywords生体リズム
Research Abstract

BMAL1 and CLOCK are the transcription factors of the circadian clock in mammals. The human BMAL1:CLOCK bHLH domain forms hetero or homo dimer and binds to E-box DNA. The hetero dimer of bHLH domain was more preferable to recognize the E-BOX DNA compared to the homo dimer based on the ITC analysis. Next we investigated the region related to the formation of the bHLH PAS-A domain of the human BMAL1:CLOCK hetero dimer. It is suggested that the bHLH domain is more important for the hetero dimer formation than the PAS-A domain.

  • Research Products

    (11 results)

All 2013 2012 2011 2010

All Journal Article (4 results) (of which Peer Reviewed: 4 results) Presentation (6 results) Book (1 results)

  • [Journal Article] Crystallization and preliminary crystallographic analysis of two eukaryotic fructosyl peptide oxidases2013

    • Author(s)
      Ichiyanagi A, Hirokawa K, Gomi K, Nakatsu T, Kato H, Kajiyama N
    • Journal Title

      Acta Crystallogr Sect F Struct Biol Cryst Commun.

      Volume: 69(Pt 2) Pages: 130-3

    • DOI

      doi:10.1107/S1744309112051445

    • Peer Reviewed
  • [Journal Article] Crystallization and preliminary X-ray crystallographic analysis of Pz peptidase B from Geobacillus collagenovorans MO-1.2012

    • Author(s)
      Nakano H, Hosokawa A, Tagawa R, Inaka K, Ohta K, Nakatsu T, Kato H, Watanabe K
    • Journal Title

      Acta Crystallogr Sect F Struct Biol Cryst Commun

      Volume: 68(Pt 7) Pages: 757-9

    • DOI

      doi:10.1107/S1744309112018969.

    • Peer Reviewed
  • [Journal Article] Structural basis for docking of peroxisomal membrane protein carrier Pex19p onto its receptor Pex3p2010

    • Author(s)
      Sato Y, Shibata H, Nakatsu T, Nakano H, Kashiwayama Y, Imanaka T, Kato H
    • Journal Title

      EMBO J

      Volume: 29 Pages: 4083-4093

    • DOI

      doi:10.1038/emboj.2010.293

    • Peer Reviewed
  • [Journal Article] Deleting two C-terminal alpha-helices is effective to crystallize the bacterial ABC transporter Escherichia coli MsbA complexed with AMP-PNP2010

    • Author(s)
      Terakado K, Kodan A, Nakano H, Kimura Y, Ueda K, Nakatsu T, Kato H
    • Journal Title

      Acta Crystallogr D

      Volume: 66 Pages: 319-323

    • DOI

      doi:10.1111/j.1742-4658.2009.07072.x

    • Peer Reviewed
  • [Presentation] ホタル由来ルシフェラーゼのオキシルシフェリンアナログ複合体の高分解能 X 線結晶構造解析2012

    • Author(s)
      寺角 香菜子, Naumov Panche, 五味 恵子, 梶山 直樹, 加藤 博章, 中津 亨
    • Organizer
      日本生化学会2012年度年会
    • Place of Presentation
      マリンメッセ福岡(福岡県)
    • Year and Date
      20121214-16
  • [Presentation] Structural basis for color modulation mechanism of firefly luciferase bioluminescence2012

    • Author(s)
      Kanako Terakado, Ryosuke Yoshimune, Keiko Gomi, Naoki Kajiyama, Hideyuki Ikeuchi, Jun Hiratake, Hiroaki Kato and Toru Nakatsu
    • Organizer
      17th International Symposium on Bioluminescence and Chemiluminescence
    • Place of Presentation
      Guelph Ontario, Canada
    • Year and Date
      20120528-0602
  • [Presentation] シジボタルルフェラーセの発光 制御メニズムの解明2011

    • Author(s)
      寺角香菜子、吉宗良祐、五味恵子、梶山直樹、池内秀幸、平竹潤、加藤博章、中津亨
    • Organizer
      日本結晶学会2011年度年会
    • Place of Presentation
      北海道大学(札幌市)
    • Year and Date
      20111124-25
  • [Presentation] ゲンジボタルルシフェラーゼの発光 決定メ ニズムの解明2011

    • Author(s)
      寺角 香菜子、吉宗 良祐、五味 恵子、梶山 直樹、池内 秀幸、平竹 潤、加藤 博章、中津 亨
    • Organizer
      日本農芸化学会2011年度年会
    • Place of Presentation
      京都女子大学(京都市)
    • Year and Date
      20110325-28
  • [Presentation] ホタルルシフェラーゼの発光 決定メ ニズムの解明2010

    • Author(s)
      吉宗良祐、寺角香菜子、加藤博章、中津亨
    • Organizer
      日本結晶学会平成22年度年会
    • Place of Presentation
      大阪大学コンベンションセンター(大阪府)
    • Year and Date
      20101203-05
  • [Presentation]2010

    • Author(s)
      寺角香菜子、吉宗良祐、五味恵子、梶山直樹、池内秀幸、平竹潤、加藤博章、中津亨
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌コンベンションセンター(札幌市)
    • Year and Date
      20100616-18
  • [Book] 生体π空間の制御機構の解明と新機能開発-ホタルルシフェラーゼによるπ空間制御機構-2013

    • Author(s)
      寺角 香菜子、中津 亨
    • Total Pages
      223-228
    • Publisher
      シーエムシー出版

URL: 

Published: 2014-08-29  

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