2013 Fiscal Year Final Research Report
Analysis of gene expression network of natural and artificial allotetraploids using next generation sequencers
| Project/Area Number |
22687021
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| Research Category |
Grant-in-Aid for Young Scientists (A)
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| Allocation Type | Single-year Grants |
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| Research Field |
Evolutionary biology
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| Research Institution | National Institute of Genetics |
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Principal Investigator |
OSADA Naoki 国立遺伝学研究所, 集団遺伝研究系, 助教 (70416270)
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| Project Period (FY) |
2010-04-01 – 2014-03-31
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| Keywords | ゲノム / 異質倍数体 / トランスクリプトーム |
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| Research Abstract |
Understanding the interaction between two different genomes is important issue in evolutionary biology research, especially when the two genomes were incorporated into the same organisms. I analyzed the genomic and expression properties of recently established natural allotetraploid plants, of which parental species are relative to the model species Arabidopsis thaliana. Using massively parallel sequencers, genome sequences of parental species and transcriptome data of allotetraploid species were studied.
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[Journal Article] Footprints of natural and artificial selection for photoperiod pathway genes in Oryza2012
Author(s)
Chao-Li Huang, Cheng-Yu Hung, Yu-Chung Chiang, Chi-Chuan Hwang, Tsai-Wen Hsu, Chi-Chun Huang, Kuo-Hsiang Hung, Kun-Chan Tsai, Kuo-HsiungWang, Naoki Osada, Barbara Anna Schaal, Tzen-Yuh Chiang
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Journal Title
Plant J
Volume: 70
Pages: 769-782
DOI
Peer Reviewed
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[Journal Article] Population genetics in non-model organisms : II. Natural selection in marginal habitats revealed by deep sequencing on dual platforms2011
Author(s)
Renchao Zhou, Shaoping Ling, Wenming Zhao, Naoki Osada, Sufang Chen, Meng Zhang, Hua Bao, Cairong Zhong, Bing Zhang, Xuemei Lu, David Turissini, Norman C. Duke, Jian Lu, Suhua Shi, Chung-I Wu
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Journal Title
Mol Biol Evol
Volume: 28
Pages: 2833-2842
DOI
Peer Reviewed
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