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2012 Fiscal Year Final Research Report

Development of molecular probes for nucleic acids imaging based on 19F NMR/MRI

Research Project

  • PDF
Project/Area Number 23750185
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Chemistry related to living body
Research InstitutionJapan Advanced Institute of Science and Technology

Principal Investigator

SAKAMOTO Takashi  北陸先端科学技術大学院大学, マテリアルサイエンス研究科, 助教 (80423078)

Project Period (FY) 2011 – 2012
Keywords分子プローブ / 核酸 / イメージング / 核磁気共鳴
Research Abstract

To improve the detection limit of the probe for 19F MR detection or imaging of target nucleic acids, new 19F labeling reagents were synthesized and introduced to the 5’ end of oligonucleotide probe having stem-loop structure. Results of the 19F NMR measurement in the presence of target DNA suggesting that the 19F labels having mono chiral structure have 5-fold large S/N ratio compared with racemic one, and the multi labeling is effective for improvement of detection limit. Furthermore, the probe capable of ratiometric detection of target DNA was successfully developed.

  • Research Products

    (10 results)

All 2012 2011

All Journal Article (5 results) (of which Peer Reviewed: 5 results) Presentation (5 results)

  • [Journal Article] Quick regulation of mRNA functions by a few seconds of photoirradiation2012

    • Author(s)
      Atsuo Shigeno, Takashi Sakamoto, Yoshinaga Yoshimura, Kenzo Fujimoto
    • Journal Title

      Organic & Biomolecular Chemistry

      Volume: 10 Pages: 7820‐7825

    • Peer Reviewed
  • [Journal Article] Specific and reversible photochemical labeling of plasmid DNA using photoresponsive oligonucleotides containing 3-cyanovinylcarbazole2012

    • Author(s)
      Kenzo Fujimoto, Kaoru Hiratsuka- Konishi, Takashi Sakamoto, Tomoko Ohtake, Ken-ichi Shinohara, Yoshinaga Yoshimura
    • Journal Title

      Molecular BioSystems

      Volume: 8 Pages: 491‐494

    • Peer Reviewed
  • [Journal Article] 5-Methylcytosine selective photoligation using photoresponsive oligonucleotides containing various 5-vinyl-2-deoxyuridines having an aromatic group2012

    • Author(s)
      Takashi Sakamoto, Takehiro Ami, Kenzo Fujimoto
    • Journal Title

      Chemistry Letters

      Volume: 41 Pages: 47‐49

    • Peer Reviewed
  • [Journal Article] Development of a potassium ion sensor for 19F magnetic resonance chemical shift imaging based on fluorine-labeled thrombin aptamer2011

    • Author(s)
      Takashi Sakamoto, Hikaru Hayakawa, Kenzo Fujimoto
    • Journal Title

      Chemistry Letters

      Volume: 40 Pages: 720‐721

    • Peer Reviewed
  • [Journal Article] Signal turn-on probe for nucleic acid detection based on 19F nuclear magnetic resonance2011

    • Author(s)
      Takashi Sakamoto, Yu-ki Shimizu, Jun Sasaki, Hikaru Hayakawa, Kenzo Fujimoto
    • Journal Title

      Bioorganic & Medicinal Chemistry Letters

      Volume: 21 Pages: 303‐306

    • Peer Reviewed
  • [Presentation] Development of nucleic acids based probes for the 19F MRI/MRS of biomolecules2012

    • Author(s)
      Takashi Sakamoto, Hikaru Hayakawa, Yu-ki Shimizu, Jun Sasaki, Kenzo Fujimoto
    • Organizer
      The 39th International Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      名古屋、愛知.
    • Year and Date
      2012-11-16
  • [Presentation] Development of Nucleic Acids Based‐Probes for the 19F MRI/MRS of Biomolecules2012

    • Author(s)
      Takashi Sakamoto, Hikaru Hayakawa, Jun Sasaki, Satomi Kishi, Kenzo Fujimoto
    • Organizer
      World Molecular Imaging Congress
    • Place of Presentation
      ダブリン、アイルランド
    • Year and Date
      2012-09-08
  • [Presentation] フッ素核磁気共鳴によるカリウムイオンセンサーの開発2011

    • Author(s)
      早川輝、佐々木淳、坂本隆、藤本健造
    • Organizer
      H23 年度北陸地区研究発表会
    • Place of Presentation
      つくば市、千葉
    • Year and Date
      2011-11-18
  • [Presentation] フッ素化合物修飾オリゴ DNA を用いた 19F NMR による核酸の検出2011

    • Author(s)
      坂本隆、清水勇喜、佐々木淳、早川輝、藤本健造
    • Organizer
      第5回バイオ関連化学シンポジウム
    • Place of Presentation
      つくば市、茨城
    • Year and Date
      2011-09-12
  • [Presentation] カリウムイオンをセンシングする19F MRI 用造影プローブの開発2011

    • Author(s)
      早川輝、佐々木淳、坂本隆、藤本健造
    • Organizer
      第5回バイオ関連化学シンポジウム
    • Place of Presentation
      つくば市、茨城
    • Year and Date
      2011-09-12

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Published: 2014-09-25  

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