Molecular analysis on gibberellin biosynthesis and signaling during the flower development.

• Project Area: Genome Barriers in Plant Reproduction
• Project/Area Number: 18075006
• Research Category: Grant-in-Aid for Scientific Research on Priority Areas
• Allocation Type: Single-year Grants
• Review Section: Biological Sciences
• Research Institution: Nagoya University
• Principal Investigator: MATSUOKA Makoto Nagoya University, 生物機能開発利用研究センター, 教授 (00270992)
• Project Period (FY): 2006 – 2010
• Project Status: Completed (Fiscal Year 2010)
• Budget Amount: ¥84,000,000 (Direct Cost: ¥84,000,000); Fiscal Year 2010: ¥16,800,000 (Direct Cost: ¥16,800,000); Fiscal Year 2009: ¥16,800,000 (Direct Cost: ¥16,800,000); Fiscal Year 2008: ¥16,800,000 (Direct Cost: ¥16,800,000); Fiscal Year 2007: ¥16,800,000 (Direct Cost: ¥16,800,000); Fiscal Year 2006: ¥16,800,000 (Direct Cost: ¥16,800,000)
• Keywords: 遺伝子 / シグナル伝達

Research Abstract

GAMYB has been isolated as a positive transfactor working in the GA signaling pathway in cereal grains. Defects in anther development of rice gamyb mutants show that GAMYB is also important for that process. Molecular analyses of GAMYB function in anther revealed that it transactivates some genes involved in exine biosynthesis, including CYP703A. Such regulation mechanism regulated by GAMYB is conserved in lower plants, S.moellendorffii, a kind of fern.

Research Products

• [Journal Article] Mitochondrial gene in the nuclear genome induces reproductive barrier in rice. (2010)
  • Author(s): Yamagata, Y., Yamamoto, E., Aya, K., Win, K.T., Doi, K., Sobrizal, Ito, T., Kanamori, H., Wu, J., Matsumoto, T., Matsuoka, M., Ashikari, M., Yoshimura, A.
  • Journal Title: Proc.Natl.Acad.Sci.USA 107,(4) Pages: 1494-1499
  • Peer Reviewed
• [Journal Article] Gain of deleterious function causes an autoimmune response and Bateson-Dobzhansky-Muller incompatibility in rice. (2010)
  • Author(s): Yamamoto, E., Takashi, T., Morinaka, Y., Lin, S., Wu, J., Matsumoto, T., Kitano, H., Matsuoka, M., Ashikari, M.
  • Journal Title: Mol Genet Genomics. 283,(4) Pages: 305-315
  • Peer Reviewed
• [Journal Article] Mitochondrial gene in the nuclear genome induces reproductive barrierin rice. (2010)
  • Author(s): Yamagata, Y.
  • Journal Title: Proc.Natl.Acad.Sci.USA Volume: 107 Pages: 1494-1499
  • Peer Reviewed
• [Journal Article] Gain of deleterious function causes an autoimmune response and Bateson-Dobzhansky-Muller incompatibility in rice. (2010)
  • Author(s): Yamamoto, E.
  • Journal Title: Mol Genet Genomics. Volume: 283 Pages: 305-315
  • Peer Reviewed
• [Journal Article] Mitochondrial gene in the nuclear genome induces reproductive barrier in rice. (2010)
  • Author(s): Yamagata, Y.
  • Journal Title: Proc.Natl.Acad.Sci.USA 107 Pages: 1494-1499
  • Peer Reviewed
• [Journal Article] A metastable DWARF1 epigenetic mutant affecting plant stature in rice. (2009)
  • Author(s): Miura, K., Agetsuma, M., Kitano, H., Yoshimura, A., Matsuoka, M., Jacobsen, S.E., Ashikari, M.
  • Journal Title: Proc.Natl.Acad.Sci.USA 106,(27) Pages: 11218-11223
  • Peer Reviewed
• [Journal Article] Isolation and characterization of dominant dwarf mutants, Slr1-d, in rice. (2009)
  • Author(s): Asano, K.
  • Journal Title: Mol.Genet.Genomics 281 Pages: 223-231
  • Peer Reviewed
• [Journal Article] High-resolution mapping revealed a 1.3-Mbp genomic inversion in Ssil, adominant semidwarf gene in rice (Oryza sativa L.). (2009)
  • Author(s): Miura, K.
  • Journal Title: Plant Breeding 128 Pages: 63-69
  • Peer Reviewed
• [Journal Article] A metastable DWARF1 epigenetic mutant affecting plant stature in rice. (2009)
  • Author(s): Miura, K.
  • Journal Title: Proc.Natl.Acad.Sci.USA 106 Pages: 11218-11223
  • Peer Reviewed
• [Journal Article] The ethylene response factors Snorkel1 and Snorkel2 allow rice to adapt todeepwater. (2009)
  • Author(s): Hattori, Y.
  • Journal Title: Nature 460 Pages: 1026-1030
  • Peer Reviewed
• [Journal Article] A rice tryptophan deficient dwarf mutant, tdd1, contains a reduced level of indole acetic acid and develops abnormal flowers and organless embryos. (2009)
  • Author(s): Sazuka, T.
  • Journal Title: Plant J. 60 Pages: 227-241
  • Peer Reviewed
• [Journal Article] Highly sensitive and high-throughput analysis of plant hormones using MS-probe modification and liquid chromatography-tandem mass spectrometry : an application for hormone profiling in Oryza sativa. (2009)
  • Author(s): Kojima, M.
  • Journal Title: Plant Cell Physiol. 50 Pages: 1201-1214
  • Peer Reviewed
• [Journal Article] Bar the windows : an optimized strategy to survive drought and salt adversities. (2009)
  • Author(s): Song X.
  • Journal Title: Genes Dev. 23 Pages: 1709-1713
• [Journal Article] The hybrid breakdown 1 (t) locus induces interspecific hybrid breakdown be tween rice Oryza sativa cv.Koshihi kari and its wild relative O.nivara. (2008)
  • Author(s): Miura, K., Yamamoto, E., Morinaka, Y., Takashi, T., Kitano, H., Matsuo ka, M., Ashikari, M.
  • Journal Title: Breeding Science 58,(2) Pages: 99-105
  • Peer Reviewed
• [Journal Article] Comprehensive transcriptome analysis of phytohorm one biosynthesis and signaling genes in microspore/pollen and tapetum of rice. (2008)
  • Author(s): Hirano, K., Aya, K., Hobo, T., Saka kibara, H., Kojima, M., Shim, R.A., Hasegawa, Y., Ueguchi-Tanaka, M.,tsuoka M.
  • Journal Title: Plant Cell Physiol. 49,(10) Pages: 1429-1450
  • Peer Reviewed
• [Journal Article] Genetic approaches to crop improvement : responding to environmental and population changes. (2008)
  • Author(s): Takeda, S., Matsuoka, M.
  • Journal Title: Nat.Rev.Genet. 9,(6) Pages: 444-457
• [Journal Article] GID1-mediated gibberellin signaling in plants. (2008)
  • Author(s): Hirano, K., Ueguchi-Tanaka, M., Matsuoka, M.
  • Journal Title: Trends Plant Sci. 13,(4) Pages: 192-199
• [Journal Article] Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice. (2008)
  • Author(s): Hirano, K., Aya, K., Hobo, T., Sakakibara, H., Kojima, M., Shim, R.A., Hasegawa, Y., Ueguchi-Tanaka, M. and Matsuoka M.
  • Journal Title: Plant Cell Physiol. 49, (10) Pages: 1429-1450
  • NAID: 10027333933
  • Peer Reviewed
• [Journal Article] Various spatiotemporal expression profiles of anther-expressed genes in rice. (2008)
  • Author(s): Hobo, T., Suwabe, K., Aya, K., Suzuki, G., Yano, K., Ishimizu, T., Fujita, M., Kikuchi, S., Hamada, K., Miyano, M., Fujioka, T., Kaneko, F., Kazama, T., Mizuta, Y., Takahashi, H., Shiono, K., Nakazono, M., Tsutsumi, N., Nagamura, Y., Kurata, N., Watanabe, M. and Matsuoka M.
  • Journal Title: Plant Cell Physiol. 49, (10) Pages: 1417-1428
  • NAID: 10027333889
  • Peer Reviewed
• [Journal Article] The hybrid breakdown 1 (t) locus induces interspecific hybrid breakdown between rice Oryza sativa cv. Koshihikari and its wild relative O. nivara (2008)
  • Author(s): Miura, K.
  • Journal Title: Breeding Science 58 Pages: 99-105
  • Peer Reviewed
• [Journal Article] Functional analysis of cotton orthologs of GA signal transduction factor : GID 1 and SLR 1 (2008)
  • Author(s): Aleman, L.
  • Journal Title: Plant Mol. Biol. 68 Pages: 1-16
  • Peer Reviewed
• [Journal Article] Release of the Repressive Activity of Rice DELLA Protein SLR 1 by Gibberellin Does Not Require SLR 1 Degradation in the gid 2 Mutant (2008)
  • Author(s): Ueguchi-Tanaka, M.
  • Journal Title: Plant Cell 20 Pages: 2437-2446
  • Peer Reviewed
• [Journal Article] Various spatiotemporal expression profiles of anther-expressed genes in rice (2008)
  • Author(s): Hobo. T.
  • Journal Title: Plant Cell Physiol. 49 Pages: 1417-1428
  • Peer Reviewed
• [Journal Article] Comprehensive transcriptome analysis of phytohormone biosynthesis and signaling genes in microspore/pollen and tapetum of rice (2008)
  • Author(s): Hirano, K.
  • Journal Title: Plant Cell Physiol. 49 Pages: 1429-1450
  • Peer Reviewed
• [Journal Article] Structural basis for gibberellin recognition by its receptor GID 1 (2008)
  • Author(s): Shimada A.
  • Journal Title: Nature 456 Pages: 520-523
  • Peer Reviewed
• [Journal Article] Genetic approaches to crop improvement : responding to environmental and population changes (2008)
  • Author(s): Takeda, S.
  • Journal Title: Nat. Rev. Genet. 9 Pages: 444-457
• [Journal Article] Identifying and exploiting grain yield genes in rice (2008)
  • Author(s): Sakamoto, T.
  • Journal Title: Curr. Opin. Plant Biol. 11 Pages: 9-214
• [Journal Article] GID 1-mediated gibberellin signaling in plants (2008)
  • Author(s): Hirano, K.
  • Journal Title: Trends Plant Sci. 13 Pages: 192-199
• [Journal Article] Auxin Biosynthesis by the YUCCA Genes in Rice. (2007)
  • Author(s): Yamamoto, Y., Kamiya, N., Morinaka, Y., Matsuoka, M., Sazuka, T.
  • Journal Title: Plant Physiol. 143,(3) Pages: 1362-1371
  • Peer Reviewed
• [Journal Article] Genetic and molecular analysis of utility of sd 1 alleles in rice breeding. (2007)
  • Author(s): Asano, K., Takashi, T., Miura, K., Qian, Q., Kitano, H., Matsuoka, M., Ashikari, M.
  • Journal Title: Breeding Science 57,(1) Pages: 53-58
  • NAID: 110006225142
  • Peer Reviewed
• [Journal Article] Interaction of two recessive genes, hbd2 and hbd3, induces hybrid breakdown in rice. (2007)
  • Author(s): Yamamoto, E., Takashi, T., Morinaka, Y., Lin, S., Kitano, H., Matsuoka, M., Ashikari, M.
  • Journal Title: Theoretical and applied genetics 115,(2) Pages: 187-194
  • Peer Reviewed
• [Journal Article] The GID1-Mediated Gibberellin Perception Mechanism Is Conserved in the Lycophyte Selaginella moellendorffii but Not in the Bryophyte Physcomitrellapatens. (2007)
  • Author(s): Hirano, K., Nakajima, M., Asano, K., Nishiyama, T., Sakakibara, H., Kojima, M., Katoh, E., Xiang, H., Tana hashi, T., Hasebe, M., Banks, JA., Ashikari, M., Kitano, H., Ueguchi-Tanaka, M., Matsuoka, M.
  • Journal Title: Plant Cell 19,(10) Pages: 3058-3079
  • Peer Reviewed
• [Journal Article] Gibberellin regulates pollen viability and pollen tube growth in rice. (2007)
  • Author(s): Tory, C., Aya, K., Asano, K., Yamamoto, E., Morinaka, Y., Watanabe, M., Kitano, H., Ashikari, M., Matsuoka, M., Ueguchi-Tanaka, M.
  • Journal Title: Plant Cell 19,(12) Pages: 3876-3888
  • NAID: 130006994429
  • Peer Reviewed
• [Journal Article] The small interfering RNA production pathway is required for shoot meristem initiation in rice. (2007)
  • Author(s): Nagasaki, H., Itoh, J., Hayashi, K., Hibara, K., Satoh-Nagasawa, N., Nos aka, M., Mukouhata, M., Ashikari, M., Kitano, H., Matsuoka, M., Nagato, Y., Sato, Y.
  • Journal Title: Proc.Natl.Acad.Sci.USA 104,(37) Pages: 14867-14871
  • Peer Reviewed
• [Journal Article] Gibberellin regulates pollen viability and pollen tube growth in rice. (2007)
  • Author(s): Tory, C., Aya, K., Asano, K., Yamamoto, E., Morinaka, Y., Watanabe, M., Kitano, H., Ashikari, M., Matsuoka, M. and Ueguchi-Tanaka, M.
  • Journal Title: Plant Cell 19, (12) Pages: 3876-3888
  • NAID: 130006994429
  • Peer Reviewed
• [Journal Article] Auxin Biosynthesis by the YUCCA Genes in Rice. (2007)
  • Author(s): Yamamoto, Y.
  • Journal Title: Plant Physiol. 143 Pages: 1362-1371
  • Peer Reviewed
• [Journal Article] Genetic and molecular analysis of utility of sdl alleles in rice breeding. (2007)
  • Author(s): Asano, K.
  • Journal Title: Breeding Science 57 Pages: 53-58
  • Peer Reviewed
• [Journal Article] Interaction of two recessive genes, hbd2 and hbd3, induces hybrid breakdown in rice. (2007)
  • Author(s): Yamamoto, E.
  • Journal Title: Theoretical and applied genetics 115 Pages: 187-194
  • Peer Reviewed
• [Journal Article] Multiple loss-function of Arabidopsis gibberellin receptor AtGIDls comoletely shuts down a gibberellin signal. (2007)
  • Author(s): Iuchi, S.
  • Journal Title: Plant J. 50 Pages: 958-966
  • Peer Reviewed
• [Journal Article] Molecular interactions of a soluble gibberellin receptor, GID1, with a rice DELLA protein, SLR1, and gibberellin. (2007)
  • Author(s): Ueguchi-Tanaka, M.
  • Journal Title: Plant Cell 19 Pages: 2140-2155
  • Peer Reviewed
• [Journal Article] The GID1-Mediated Gibberellin Perception Mechanism Is Conserved in the Lycophyte Selaginella moellendorffii but Not in the Bryophyte Physcomitrella patens. (2007)
  • Author(s): Hirano, K.
  • Journal Title: Plant Cell 19 Pages: 3058-3079
  • Peer Reviewed
• [Journal Article] Gibberellin regulates pollen viability and pollen tube growth in rice. (2007)
  • Author(s): Tory, C.
  • Journal Title: Plant Cell 19 Pages: 3876-3888
  • Peer Reviewed
• [Journal Article] A Major QTL Confers Rapid Internode Elongation in Response to Water Rise in Deepwater Rice. (2007)
  • Author(s): Hattori, Y.
  • Journal Title: Breeding Science 57 Pages: 305-314
  • Peer Reviewed
• [Journal Article] The small interfering RNA production pathway is required for shoot meristem initiation in rice. (2007)
  • Author(s): Nagasaki, H.
  • Journal Title: Proc. Natl. Acad. Sci. USA 104 Pages: 14867-14871
  • Peer Reviewed
• [Journal Article] GAMYB controls different sets of genes and is differentially regulated by microRNA in aleurone cells and anthers. (2006)
  • Author(s): Tsuji, H., Aya, K., Ueguchi-Tanaka, M., Shimada, Y., Nakazono, M., Watanabe, R., Nishizawa, N-K., Gomi, K., Shimada, A., Kitano, H., Ashikari, M., Matsuoka, M.
  • Journal Title: Plant J. 47,(3) Pages: 427-444
  • Peer Reviewed
• [Journal Article] The role of OsBRI1 and its homologous genes, OsBRL1 and OsBRL3, in rice. (2006)
  • Author(s): Nakamura, A., Fujioka, S., Sunohara, H., Kamiya, N., Hong, Z., Inukai, Y., Miura, K., Takatsuto, S., Yoshida, S., Ueguchi-Tanaka, M., Hasegawa, Y., Kitano, H., Matsuoka, M.
  • Journal Title: Plant Physiol. 140,(2) Pages: 580-590
  • Peer Reviewed
• [Journal Article] Morphological Alteration Caused by Brassinosteroid Insensitivity Increases the Biomass and Grain Production of Rice. (2006)
  • Author(s): Morinaka, Y., Sakamoto, T., Inukai, Y., Agetsuma, M., Kitano, H., Ashikari, M., Matsuoka, M.
  • Journal Title: Plant Physiol. 141,(3) Pages: 924-931
  • Peer Reviewed
• [Journal Article] The role of OsBRI1 and its homologous genes, OsBRL1 and OsBRL3, in rice. (2006)
  • Author(s): Nakamura, A.
  • Journal Title: Plant Physiol. 140 Pages: 580-590
• [Journal Article] Morphological Alteration Caused by Brassinosteroid Insensitivity Increases the Biomass and Grain Production of Rice. (2006)
  • Author(s): Morinaka, Y.
  • Journal Title: Plant Physiol. 141 Pages: 924-931
• [Journal Article] Six-rowed barley originated from a mutation in a homeodomain-leucine zipper l-class homeobox gene. (2006)
  • Author(s): Komatsuda, T.
  • Journal Title: Proc. Natl. Acad. Sci. USA 104 Pages: 1424-1429
• [Journal Article] Formation, maintenance and function of the shoot apical meristem in rice. (2006)
  • Author(s): Itoh, J.
  • Journal Title: Plant Mol. Biol. 60 Pages: 827-842
• [Presentation] ジベレリン(GA)情報伝達系におけるユビキチン依存的タンパク分解機構とGID1受容体 (2010)
  • Author(s): 上口(田中)美弥子
  • Organizer: 第51回日本植物生理学会年会
  • Place of Presentation: 熊本
  • Year and Date: 2010-03-21
• [Presentation] ジベレリン(GA)情報伝達系におけるユビキチン依存的タンパク分解機構とGID1受容体 (2010)
  • Author(s): 上口(田中)美弥子
  • Organizer: 第51会日本植物生理学会年会
  • Place of Presentation: 熊本
  • Year and Date: 2010-03-21
• [Presentation] 共発現ネットワーク解析によるイネ細胞壁形成に関わる因子の網羅的解析 (2010)
  • Author(s): 安益公一郎
  • Organizer: 第51会日本植物生理学会年会
  • Place of Presentation: 熊本
  • Year and Date: 2010-03-20
• [Presentation] イネ半優性矮性変異体Slr1-dの解析 (2010)
  • Author(s): 平野恒
  • Organizer: 第51回日本植物生理学会年会
  • Place of Presentation: 熊本
  • Year and Date: 2010-03-18
• [Presentation] イネ半優性倭性変異体Slr1-dの解析 (2010)
  • Author(s): 平野恒
  • Organizer: 第51会日本植物生理学会年会
  • Place of Presentation: 熊本
  • Year and Date: 2010-03-18
• [Presentation] GA signaling pathways for yield traits in rice. (2009)
  • Author(s): Matsuoka, M.
  • Organizer: 6th International Rice Genetics Symposium.
  • Place of Presentation: Manila, Philipins
  • Year and Date: 2009-11-17
• [Presentation] ジベレリン受容体のシグナル分担制御機構の解析 (2009)
  • Author(s): Seung-Hyun Park
  • Organizer: 植物化学調節学会
  • Place of Presentation: 仙台
  • Year and Date: 2009-10-29
• [Presentation] Molecular Basis of Gibberellin Perception by Its Receptor GID 1 (2009)
  • Author(s): Matsuoka, M.
  • Organizer: Perspectives of Plant Science in the 21 st Century In Celebration of the 50 th Anniversary of JSPP
  • Place of Presentation: 名古屋、日本
  • Year and Date: 2009-03-23
• [Presentation] イネの小胞子/花粉およびタ ペータムにおける植物ホルモン関連遺伝子の網羅的な発現解析 (2009)
  • Author(s): 平野恒
  • Organizer: 第50回日本植物生理学会年会
  • Place of Presentation: 名古屋
• [Presentation] イネの雄性配偶子とタペータム細胞でのトランスクリプトーム解析 (2009)
  • Author(s): 保浦徳昇
  • Organizer: 第50回日本植物生理学会年会
  • Place of Presentation: 名古屋
• [Presentation] MYB型転写因子GAMYBによるエキシン形成制御機構はいつ誕生したか (2009)
  • Author(s): 安益公一郎
  • Organizer: 第50回日本植物生理学会年会
  • Place of Presentation: 名古屋
• [Presentation] イネの小胞子/花粉およびタペータムにおける植物ホルモン関連遺伝子の網羅的な発現解析 (2009)
  • Author(s): 平野恒
  • Organizer: 第50会日本植物生理学会年会
  • Place of Presentation: 名古屋、日本
• [Presentation] イネの雄性配偶子とタペータム細胞でのトランスクリプトーム解析 (2009)
  • Author(s): 保浦徳昇
  • Organizer: 第50会日本植物生理学会年会
  • Place of Presentation: 名古屋、日本
• [Presentation] MYB型転写因子GAMYBによるエキシン形成制御機構はいつ誕生したか (2009)
  • Author(s): 安益公一郎
  • Organizer: 第50会日本植物生理学会年会
  • Place of Presentation: 名古屋、日本
• [Presentation] Structural basis for gibberellin recognition by its receptor GID1. (2008)
  • Author(s): Matsuoka, M.
  • Organizer: The 6th International Symposium of Rice Functional Genomics.
  • Place of Presentation: Jeju, Korea
• [Presentation] イネにおけるジベレリン欠損変異体と非感受性変異体における遺伝様式の違い (2008)
  • Author(s): 安益公一郎、上口(田中)美弥子、Chhun TORY、浅野賢治、山本英司、渡辺正夫、北野英己、芦苅基行、松岡信
  • Organizer: 第49回日本植物生理学会年会
  • Place of Presentation: 札幌
• [Presentation] ジベレリンシグナルに関与するMYB型転写因子GAMYBの葯における機能 (2008)
  • Author(s): 安益公一郎、上口(田中)美弥子、辻寛之、近藤真紀、西村幹夫、芦苅基行、松岡信
  • Organizer: 第49回日本植物生理学会年会
  • Place of Presentation: 札幌
• [Presentation] Structural basis for gibberellin recognition by its receptor GID 1 (2008)
  • Author(s): Matsuoka, M.
  • Organizer: The 6 th International Symposium of Rice Functional Genomics
  • Place of Presentation: Jeju, Korea
• [Presentation] GAMYB plays the important role in pollen development as a member of GA signaling (2007)
  • Author(s): Aya, K.
  • Organizer: 9th IPGSA Meeting
  • Place of Presentation: Puerto Vallarta, Mexico
• [Presentation] GAMYB plays the important role in pollen development as a member of GA signaling (2007)
  • Author(s): Aya, K., Ueguchi-Tanaka, M., Kondo, M., Tsuji, H., Ashikari, M., Nishimura, M. and Matsuoka, M.
  • Organizer: 19th IPGSA Meeting
  • Place of Presentation: Puerto Vallarta, Mexico
• [Book] Molecular biology of gibberellins signaling in higher plants. Int Rev Cell Mol Biol. 268 (2008)
  • Author(s): Itoh, H., Ueguchi-Tanaka, M., Matsuoka M.
• [Book] Molecular biology of gibberellins signaling in higher plants. (2008)
  • Author(s): Itoh, H., Ueguchi-Tanaka, M. and Matsuoka M.
  • Publisher: Int Rev Cell Mol Biol. 268
• [Book] International Review of Cell and Molecular Biology (2008)
  • Author(s): Itoh, H.
  • Publisher: Academic Pr