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Cloning and Functional Analysis of Mammalian Peroxisome Assembly Factors

Research Project

Project/Area Number 09480164
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionHimeji Institute of Technology

Principal Investigator

OSUMI Takashi  Himeji Institute of Technology, Faculty of Science, Professor, 理学部, 教授 (50111787)

Co-Investigator(Kenkyū-buntansha) TSUKAMOTO Toshiro  Himeji Institute of Technology, Faculty of Science, Assistant Professor, 理学部, 助手 (30236864)
Project Period (FY) 1997 – 1999
Project Status Completed (Fiscal Year 1999)
Budget Amount *help
¥15,100,000 (Direct Cost: ¥15,100,000)
Fiscal Year 1999: ¥2,500,000 (Direct Cost: ¥2,500,000)
Fiscal Year 1998: ¥4,200,000 (Direct Cost: ¥4,200,000)
Fiscal Year 1997: ¥8,400,000 (Direct Cost: ¥8,400,000)
KeywordsPeroxisome / Peroxisome assembly factors / Peroxisome biogenesis disorders / Green fluorescent protein / PEX gene / Zellweger syndrome / ペルコキシソーム欠損症 / GFP / 温度感受性変異 / Infantlle Refsum病 / Infantile Refsum disease
Research Abstract

Peroxisome is a ubiquitous organelle, present in almost all types of eukaryotic cells from yeast to humans. It carries out important metabolic functions including fatty acid degradation and other oxidative reactions. More than twenty peroxisome assembly gene (PEX genes) have been identified, and human peroxisome biogenesis disorders (PBDs) due to the PEX gene deficiencies are known. In the present work, we studied the mechanism of peroxisome biogenesis, employing the fibroblasts of PBD patients and peroxisome-defective CHO cell lines. The results are :
(1) We cloned several new PEX genes.
(2) We identified casual genes for several complementation groups of PBDs, and detected the responsible mutations.
(3) Cases of different severity are often found in the same complementation groups of PBDs. For several complementation groups of PBDs, fibroblasts from the patients of milder forms of PBDs exhibited a temperature-sensitive phenotype, that is, catalase-containing peroxisomes were recovered at lower temperatures. A causal point mutation was identified in a patient. Fibroblasts form these patients have "catalase-less peroxisomes" that contain fatty acid β-oxidation enzymes but not catalase, which seemed to be the cause of the milder phenotype.
(4) Many peroxisome-deficient cells contain peroxisome-related membrane structures lacking the peroxisome matrix proteins, called "ghosts". It was shown by genetic complementation of the PEX2- and PEX5-defective cells, that peroxisomes were recovered by the transport of matrix proteins to the pre-existing ghosts. In the mutant cells defective of PEX6, a gene coding for an AAA-ATPase, peroxisome matrix proteins were found to be accumulated in membrane structures closely contacting with, but different from, the ghosts, suggesting an abnormality in the membrane assembly processes.

Report

(4 results)
  • 1999 Annual Research Report   Final Research Report Summary
  • 1998 Annual Research Report
  • 1997 Annual Research Report
  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] Tsukamoto, Toshiro: "Isolation of a peroxisome deficient CHO cell mutant detective in peroxisome targeting signal-1 receptor"Biochemical and Biophysical Research Communications. 230. 402-406 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Imamura. Atsushi: "Temperature-sensitive phenotypes of peroxisome assembly processes represent the milder forms of human peroxisome biogenesis disorders"American Journal of Human Genetics. 62. 1539-1543 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Shimozawa, Nobuyuki: "Genetic basis of peroxisome assembly mutants of humans, CHO cells and veast. identification of a new complementation group of peroxisome biogenesis disorders. avsent from peroxisomal membrane ghosts"American journal of Human Genetics. 63. 1898-1903 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Imamura, Atsushi: "Temperature-sensitive mutation in PEX1 moderates the phenotypes of peroxisome deficiency disorders in the highest-incidence group"Human Molecular Genetics. 7. 2089-2094 (1998)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Shimozawa, Nobuyuki: "Nonsense and temperature-sensitive mutations in PEX13 are the cause of complementation group H of peroxisome biogenesis disorders"Human Molecular Genetics. 8. 1077-1083 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Yamasaki, Masatoshi: "Formation of peroxisomes from peroxisomal ghosts in a peroxisome-deficient mammalian cell mutant upon complementation by protein microinjection"The Journal of Biological Chemistry. 274. 35293-35296 (1999)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Tsukamoto Toshio et al.: "Isolation of a peroxisome deficient CHO cell mutant defective in peroxisome targeting signal-1 receptor."Biochemical and Biophysical Research Communications. 230. 402-406 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Imamura Atsushi et al.: "Temperature-sensitive phenotypes of peroxisome assembly processes represent the milder forms of human peroxisome biogenesis disorders."American Journal of Human Genetics. 62. 1539-1543 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Simozawa Nobuyuki et al.: "Genetic basis of peroxisome assembly mutants of humans, CHO cells and yeast : identification of a new complementation group of peroxisome biogenesis disorders, absent from peroxisomal membrane ghosts."American Journal of Human Genetics. 63. 1898-1903 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Imamura Atsushi et al.: "Temperature-sensitive mutation in PEX1 moderates the phenotypes of peroxisome deficiency disorders in the highest-incidence group."Human Molecular Genetics. 7. 2089-2094 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Simozawa Nobuyuki et al.: "Nonsense and temperature-sensitive mutations in PEX13 are the cause of complementation group H of peroxisome biogenesis disorders."Human Molecular Genetics. 8. 1077-1083 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Yamasaki Masatoshi et al.: "Formation of peroxisomes from peroxisomal ghosts in a peroxisome-deficient mammalian cell mutant upon complementation by protein microinjection."The Journal of Biological Chemistry. 274. 35293-35296 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1999 Final Research Report Summary
  • [Publications] Imanaka,Tsuneo: "Characterization of the 70-kDa peroxisomal membrane protein,an ATP binding cassette transporter"The Journal of Biological Chemistry. 274. 11968-11976 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Shimozawa,Nobuyuki: "Nonsense and temperature-sensitive mutations in PEX13 are the cause of complementation group H of peroxisome biogenesis disorders"Human Molecular Genetics. 8. 1077-1083 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Zhang,Zhongyi: "Genomic structure and idenification of 11 novel mutations of the PEX6(peroxisome assembly factor-2)gene in patients with peroxisome biogenesis disorders"Human Mutation. 13. 487-496 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Shimozawa,Nobuyuki: "Functional Heterogeneity of C-Terminal Peroxisome Targeting Signal 1 in PEX5-Defective Patients"Biochemical and Biophysical Research Communications. 262. 504-508 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Shimozawa,Nobuyuki: "Defective PEX gene products correlate with the protein import,biochemical abnormalities,and phenotypic heterogeneity in peroxisome biogenesis disorders"Journal of Medical Genetics. 36. 779-781 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Yamasaki,Masatoshi: "Formation of peroxisomes from peroxisomal ghosts in a peroxisome-deficient mammalian cell mutant upon complementation by protein microinjection"The Journal of Biological Chemistry. 274. 35293-35296 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Tamura,Shigehiko: "Human PEX1 cloned by functional complementation on a CHO cell mutants is responsible for peroxisome-deficient Zellweger syndrome of complementation group I" Proceedings of the National Academy of Science,USA. 95. 4350-4355 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Imamura,Atsushi: "Temperature-sensitive phenotypes of peroxisome assembly processes represent the milder forms of human peroxisome biogenesis disorders" American Journal of Human Genetics. 62. 1539-1543 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Yamasaki,Masatoshi: "Variant forms of green and blue fluorescent proteins adapted for the use in mammalian cells" Bioimages. 6. 1-7 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Okumoto,Kanji: "PEX12,the pathogenic gene of group III zellweger syndrome:cDNA cloning by functional complementation on a CHO cell mutant,patient analysis,and characterization of pex12p" Molecular and Cellular Biology. 18. 4324-4336 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Imamura,Atsushi: "Temperature-sensitive mutation in PEX1 moderates the phenotypes of peroxisome deficiency disorders in the highest-incidence group" Human Molecular Genetics. 7. 2089-2094 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Shimozawa,Nobuyuki: "Genetic basis of peroxisome assembly mutants of humans,CHO cells and yeast:identification of a new complementation group of peroxisome biogenesis disorders,absent from peroxisomal membrane ghosts" American Journal of Human Genetics. 63. 1898-1903 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Okumoto, Kanji: "Isolation and characterization of peroxisome-deficient Chinese hamster ovary (CHO) cell mutants representing human complementation group III" Experimental Cell Research. 233. 11-20 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Tateishi, Keita: "Newly identified Chinese hamster ovary cell mutants defective in peroxisome biogenesis represent two novel complementation groups in mammals" European Journal of Cell Biology. 73. 352-359 (1997)

    • Related Report
      1997 Annual Research Report
  • [Publications] Otera, Hidenori: "Peroxisome targeting signal type 1 (PTS1)-receptor is involved in import of both PTS1- and PTS-2 protein : studies with PEX5-defective CHO cell mutants" Molecular and Cellular Biology. 18. 388-399 (1998)

    • Related Report
      1997 Annual Research Report
  • [Publications] Shimozawa, Nobuyuki: "Peroxisome biogenesis disorders : identification of a new complementation group distinct from peroxisome deficient CHO mutants and not complemented by human PEX13" Biochemical and Biophysical Research Communications. (印刷中).

    • Related Report
      1997 Annual Research Report

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Published: 1997-04-01   Modified: 2016-04-21  

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