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Microsatellite instability in mononuclear cells from non-tumorigenetic human tonsils and its forensic applications

Research Project

Project/Area Number 10670402
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Legal medicine
Research InstitutionTokyo Medical University

Principal Investigator

KOBAYASHI Ryo  Tokyo Medical University Medicine Instructor, 医学部, 講師 (40146775)

Co-Investigator(Kenkyū-buntansha) MIZUNO Fumio  Tokyo Medical University Medicine Professor, 医学部, 教授 (50001904)
HIRAI Kanji  Tokyo Medical and Dental Univ.Medical Research Institute.Professor, 難研, 教授 (00100991)
ITOH Yukio  Juntendo Univ School of Medicine. Dept of Forensic Medicine.Instructor, 医学部, 講師 (70053345)
Project Period (FY) 1998 – 2000
Project Status Completed (Fiscal Year 2000)
Budget Amount *help
¥3,300,000 (Direct Cost: ¥3,300,000)
Fiscal Year 2000: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1999: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1998: ¥1,700,000 (Direct Cost: ¥1,700,000)
Keywordsmicrosatellite / PCR / personal identification / DNA / TH01 / tonsil / EBV
Research Abstract

Microsatellites consisted of tandem repeated sequence motifs of 1 to 6 nucleotides in length are highly polymorphism and scattered more or less randomly throughout the genome. The use of polymorphism microsatellite DNA sequences has become extremely important in genetic mapping studies and in the diagnosis of human genetic diseases. Microsatellite instability (MSI) has been reported to be a landmark of some tumors of the colon and rectum and is characterized by small deletions or expansions within short tandem repeats in tumor DNA as compared with matching normal DNA.
In this project, we have tried to find the presence of MSI in healthy individuals and to examine the application of forensic cases. TH01 locus was selected as a microsatellite and determined at the mononuclear cells isolated from tonsils. Seminested PCR was performed to determine TH01 types using single cells. One hundred and seventy-eight out of 450 cells could be typed (39.6%) and the type of only 1 cell (0.56%) was mutated. This result indicates that a microsatellite alteration at TH01 locus may be observed in the cells proliferated vigorously in tissues. However, there is little probability that microsatellite typing will be incorrect using a DNA template that includes mutated DNA at 0.56% of cells.

Report

(4 results)
  • 2000 Annual Research Report   Final Research Report Summary
  • 1999 Annual Research Report
  • 1998 Annual Research Report
  • Research Products

    (31 results)

All Other

All Publications (31 results)

  • [Publications] Itoh,Y.: "Discrepant results of ABO blood grouping obtained by serologic and PCR techniques from highly putrefied semen"Prog Foren Genet. 8. 548-551 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ikeda,T.: "Detection of lymphocytes productively infected with Epstein-Barr virus in non-neoplastic tonsils"J Gen Virol. 81. 1211-1216 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh,Y.: "Evaluation of ABO and Lewis genotypes using primer extension preamplification"Forens Sci Int. 113. 139-141 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 伊藤幸夫: "細菌に汚染された精液からのDNA分析と解離試験による血液型判定"DNA多型. 8. 292-294 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] 池田哲也: "Epstein-Barrウイルスと突発性間質性肺炎との関連について"東医大誌. 58. 527-532 (2000)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Hirai K: "Epstein-Barr virus genome in infected cells and cancer"Gann Monograph on Cancer Research. 45. 29-39 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Kobayashi R: "Detection of Epstein-Barr virus infection in the epithelial cells and lymphocytes of non-neoplastic tonsils by in situ hybridization"Arch Virol. 143-4. 803-813 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Kobayashi R: "Comparatve analysis of ABO typing by both serological and DNA analyses from highly putrefied semen"Pros Fores Genet. 7. 103-105 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh Y: "DNA analyses of ABO blood group variants.A3, Aend and Bm"Prog Forens Genet. 7. 204-206 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Sato K: "Typing of DNA using the primer extension preampliticatin (PEP) method-Studies of reliability of typing and detection limits-"Jpn J Legal Med. 52-3. 184-190 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Kobayashi R: "Analysis of D1S80 locus"DNA Polymorphism. 6. 90-94 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh Y: "DNA analyses from bloodstains of ABO blood group variants"DNA Polymorphism. 6. 60-63 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh Y: "DNA typing of ABO and Lewis blood groups using whole genome amplification"DNA Polymorphism. 7. 237-240 (1999)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh Y: "Discrepant results of ABO blood grouping obtained by serologic and PCR techniques from highly putrefied semen"Prog Foren Genet. 8. 548-551 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Ikeda T: "Detection of lymphocytes productively infected with Epstein-Barr virus in non-neoplastic tonsils"J Gen Virol. 81-5. 1211-1216 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh Y: "Evaluation of ABO and Lewis genotypes using primer extension preamplification"Forens Sci Int. 113-1-3. 139-141 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh Y: "Determination of blood groups on semen contaminated with microorganism by DNA analysis and elution technique"DNA Polymorphism. 8. 292-294 (2000)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2000 Final Research Report Summary
  • [Publications] Itoh,Y.: "Discrepant results of ABO blood grouping obtained by serologic and PCR techniques from highly putrefied semen"Prog Forens Genet. 8. 548-551 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Ikeda,T.: "Detection of lymphocytes productively infected with Epstein-Barr virus in non-neoplastic tonsils"J Gen Virol. 81. 1211-1216 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] Itoh,Y.: "Evaluation of ABO and Lewis genotypes using primer extension preamplification"Forens Sci Int. 113. 139-141 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 伊藤幸夫: "細菌に汚染された精液からのDNA分析と解離試験による血液型判定"DNA多型. 8. 292-294 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 池田哲也: "Epstein-Barrウイルスと突発性間質性肺炎との関連について"東医大誌. 58. 527-532 (2000)

    • Related Report
      2000 Annual Research Report
  • [Publications] 伊藤 幸夫: "Whole genome amplificationによるABO式及びLewis式血液型関連糖転移酵素の遺伝子診断"DNA多型. 7. 237-240 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] 宮澤 隆仁: "抗シナプス小胞関連蛋白(SVP-38)モノクローナル抗体による脳のイメージング"脳のイメージング. 145-155 (1999)

    • Related Report
      1999 Annual Research Report
  • [Publications] Tetsuya Ikeda: "Detection of Epstein-Barr virus productively infected lymphocytes in the non-neoplastic tonsils"J Gen Virol. (in press).

    • Related Report
      1999 Annual Research Report
  • [Publications] Hirai,K.: "Epstein-Barr virus genome in infected cells and cancer." Gann Monograph on Cancer Research. 45. 29-39 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kobayashi,R.: "Detection of Epstein-Barr virus infection in the epithelial cells and lymphocytes of non-neoplastic tonsils by in situ hybridization and in situ PCR" Arch Virol. 143. 803-813 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Kobayashi,R.: "Comparative analysis of ABO typing by bothserological and DNA analyses from highly putrefied semen," Prog Fores Genet. 7. 103-105 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] Itoh,Y.: "DNA analyses of ABO blood group variants,A3,Aend,and Bm" Prog Fores Genet. 7. 204-206 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 小林 了: "DIS80にみられた42以上型の解析" DNA多型. 6. 90-94 (1998)

    • Related Report
      1998 Annual Research Report
  • [Publications] 佐藤耕一: "Primer extension preamplification(PEP)法を用いたDNA型判定について -型判定の正確さと検出限界の検討-" 日法医誌. 52. 184-190 (1998)

    • Related Report
      1998 Annual Research Report

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Published: 1998-04-01   Modified: 2016-04-21  

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