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RNA degradation via autophagy in eukaryote

Research Project

Project/Area Number 15K06949
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Molecular biology
Research InstitutionTokyo Institute of Technology

Principal Investigator

Horie Tomoko  東京工業大学, 科学技術創成研究院, 助教 (70435527)

Research Collaborator SEKITO Takayuki  愛媛大学, 農学部生物資源学科, 教授 (20419857)
OHSUMI Yoshinori  東京工業大学, 科学技術創成研究院, 特任教授 (30114416)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2017: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2015: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Keywordsオートファジー / 分解 / RNase / 核酸 / RNA / RNA-seq / 輸送体 / 液胞 / 輸送 / 代謝 / RNA分解
Outline of Final Research Achievements

Autophagy is an intracellular catabolic system that facilitates the degradation of proteins, nucleic acids and lipids. In general, autophagy is considered a non-selective process, but defined targets degraded by selective autophagy have also been identified. In this study, we set out to determine whether specific RNA species can also be degraded selectively by autophagy. To this end, we first developed a means of purifying RNA that is degraded by autophagy in yeast. Using this technique, we identified targets of selective autophagy and studied the mechanism of their selective degradation. In addition, we also undertook a study of transporters required for the efflux of autophagy-derived RNA degradation products from the vacuole. We identified Fun26, a transporter localizing to the vacuole membrane, as such a nucleoside transporter, and our analyses indicate several further candidate transporter proteins involved in the recycling of RNA degradation products to the cytosol.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (3 results)

All 2017 2015

All Presentation (3 results) (of which Invited: 2 results)

  • [Presentation] オートファジーと代謝2017

    • Author(s)
      川俣 朋子
    • Organizer
      第11回メタボロームシンポジウム
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] オートファジーの誘導と代謝変化2017

    • Author(s)
      川俣 朋子
    • Organizer
      日本農芸化学会 2017年度第三回関東支部例会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] オートファジーによるRNA分解機構2015

    • Author(s)
      堀江 朋子(川俣朋子)
    • Organizer
      第9回オートファジー研究会
    • Place of Presentation
      淡路夢舞台国際会議場 (神戸)
    • Year and Date
      2015-11-16
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2019-03-29  

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