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Detection of macroalgal seed bank using epilithic gastropod inhabiting deforested area

Research Project

Project/Area Number 15K07525
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Aquatic bioproduction science
Research InstitutionTokyo University of Marine Science and Technology

Principal Investigator

Fujita Daisuke  東京海洋大学, 学術研究院, 准教授 (70361813)

Research Collaborator NAGAI SATOSHI  国立研究開発法人水産研究・教育機構, 中央水産研究所, グループ長 (80371962)
Project Period (FY) 2015-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2017: ¥520,000 (Direct Cost: ¥400,000、Indirect Cost: ¥120,000)
Fiscal Year 2016: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2015: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywordsユキノカサガイ / シードバンク / 潜在的植生 / 磯焼け / 遺伝子解析 / メタゲノム解析 / 培養 / ギンタカハマ
Outline of Final Research Achievements

Spores and micro-generations of macroalgae are present as potential vegetation even on the urchin barrens; the information on such 'macroalgal seed bank' is important to restore algal beds by removing sea urchins. To detect the components of the seed bank, heavy cobbles were collected to incubate for a few months. In the present study, a new method using barren-ground dominant small limpet was developed. Shells of limpets were collected from different zones in different seasons. Incubation with the shell revealed the presence of 10 to 12 macroalgal species on urchin barrens. Metagenomic analysis (DNA metabarcoding) identified more number of species with the accuracy of species or generic level from the residues scraped off from the limpet shell surfaces. This technique makes the sampling easier and shorten the time for detecting the macroalgal seed bank.

Academic Significance and Societal Importance of the Research Achievements

ウニが増えすぎて海藻が生えない磯焼けでは,その駆除による藻場回復が続けられている。駆除した海底に海藻シードバンク(胞子や微小世代)が含まれていれば速やかに群落が回復するが,そうでなければ徒労に終わり,スポアバッグなど補助手段が必要になる。従来は海底の重たい石を採集し,数カ月間,清浄で富栄養の海洋深層水を用いて培養し,海藻シードバンクを検出していた。本研究は,小型のカサガイを利用し,メタゲノム解析も導入し,水中作業の軽減と海藻シードバンクの同定・確認の迅速化を図った。本研究は,国内の磯焼け研究で初めてメタゲノム解析を始めて導入し,ウニ除去の適地選択に科学的根拠を与える手法を開発した。

Report

(6 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Products Report
  • Research Products

    (9 results)

All 2020 2019 2018 2017 2016

All Journal Article (3 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 3 results) Presentation (6 results) (of which Int'l Joint Research: 3 results,  Invited: 1 results)

  • [Journal Article] Variation in “bank of microscopic forms”in urchin barren coast : detection using DNA metabarcoding based on high-throughput sequencing2020

    • Author(s)
      Shingo Akita, Hiroki Murasawa, Yoshihito Takano, Yoko Kawakami, Daisuke Fujita, Satoshi Nagai
    • Journal Title

      Journal of Applied Phycology

      Volume: 32 Issue: 3 Pages: 2115-2124

    • DOI

      10.1007/s10811-020-02122-3

    • Related Report
      Products Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] DNA metabarcoding analysis of macroalgal seed banks on shell surface of the limpet Niveotectura pallida2020

    • Author(s)
      Shingo Akita, Hiroki Murasawa, Mitsuki Kondo, Yoshihito Takano, Yoko Kawakami, Satoshi Nagai, Daisuke Fujita
    • Journal Title

      European Journal of Phycology

      Volume: 55 Issue: 4 Pages: 1-11

    • DOI

      10.1080/09670262.2020.1750056

    • Related Report
      Products Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Rapid detection of macroalgal seed bank on cobbles : application of DNA metabarcoding using next-generation sequencing2019

    • Author(s)
      Shingo Akita, Yoshihito Takano, Satoshi Nagai, Hisami Kuwahara, Rumiko Kajihara, Akifumi S. Tanabe, Daisuke Fujita
    • Journal Title

      Journal of Applied Phycology

      Volume: 31 Issue: 4 Pages: 2743-2753

    • DOI

      10.1007/s10811-018-1730-9

    • Related Report
      Products Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] ユキノカサガイを利用した潜在的植生の検出2018

    • Author(s)
      近藤秀城・藤田大介
    • Organizer
      日本藻類学会仙台大会
    • Related Report
      2017 Research-status Report
  • [Presentation] 宮城県女川町御前湾におけるメタバーコーディング解析を用いたユキノカサガイ殻表面の潜在的海藻植生の検出2017

    • Author(s)
      村澤博基・近藤秀城・漆崎慎吾・高野義人・藤田大介・長井 敏
    • Organizer
      第41回日本藻類学会高知大会
    • Place of Presentation
      高知大学
    • Year and Date
      2017-03-24
    • Related Report
      2016 Research-status Report
  • [Presentation] 磯焼け域における潜在的植生の検出,培養かメタゲノム解析か?2017

    • Author(s)
      藤田大介・村澤博基・近藤秀城・漆崎晋吾・長井敏
    • Organizer
      アジア太平洋藻類学フォーラム
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 宮城県女川湾指浜地先のウニ焼け域のユキノカサガイ殻面上の植生に与える影響2016

    • Author(s)
      近藤秀城・藤田大介
    • Organizer
      第13回棘皮動物研究集会
    • Place of Presentation
      東京海洋大学
    • Year and Date
      2016-12-03
    • Related Report
      2016 Research-status Report
  • [Presentation] Distribution, density and potential vegetation on a limpet Niveotectura pallida dominant on an urchin barren in Northern Japan2016

    • Author(s)
      Daisuke Fujita, Mizuki Kondo
    • Organizer
      The 11th International Temperate Reef Symposium
    • Place of Presentation
      Pisa
    • Year and Date
      2016-06-26
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Genome analysis of potential vegetation of a limpet dominant on urchin barren ground2016

    • Author(s)
      Daisuke Fujita・Tomohiro Kosako・Yoshihito Takano・Satoshi Nagai
    • Organizer
      The 22nd International Seaweed Symposium
    • Place of Presentation
      Copenhagen
    • Year and Date
      2016-06-19
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research

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Published: 2015-04-16   Modified: 2021-07-06  

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