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Longitudinal analyses of genetic alterations in malignant lymphoma using cell-free DNA: detection of refractory disease related abnormalities and application possibility in clinical trials.

Research Project

Project/Area Number 15K09473
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Hematology
Research InstitutionFujita Health University

Principal Investigator

Tomita Akihiro  藤田保健衛生大学, 医学部, 准教授 (80378215)

Co-Investigator(Renkei-kenkyūsha) YOSHIDA Kenichi  京都大学, 医学部・腫瘍生物学講座 (50738226)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2017: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords悪性リンパ腫 / 網羅的遺伝子変異解析 / 末梢血無細胞遊離DNA / リキッドバイオプシー / 血管内大細胞型B細胞リンパ腫 / 免疫回避 / びまん性大細胞型B細胞リンパ腫 / 遺伝子変異
Outline of Final Research Achievements

Accumulation of genetic mutations is critical for lymphomatogenesis, disease progression and sensitivity to targeting therapeutics in malignant lymphoma (ML). In this analysis, peripheral blood cell-free DNA (cfDNA) was longitudinally analyzed to reveal correlation with clinical features and to detect tumor specific genetic alterations. Especially in intravascular large B-cell lymphoma, those tumor cells are hardly obtained from biopsy sample, cfDNA was an alternative tumor DNA source to detect specific genetic alterations in comprehensive genetic analyses. Genetic analyses using cfDNA may become an alternative powerful strategy to detect tumor specific genetic abnormalities not only for diagnosis but also longitudinal analyses to predict sensitivity to molecular targeting drugs, even in patients whose tumor cells cannot be obtained easily during their clinical courses.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (49 results)

All 2018 2017 2016 2015

All Journal Article (18 results) (of which Peer Reviewed: 18 results,  Open Access: 10 results,  Acknowledgement Compliant: 5 results) Presentation (16 results) (of which Int'l Joint Research: 5 results,  Invited: 5 results) Book (15 results)

  • [Journal Article] Partial restoration of CD20 protein expression and rituximab sensitivity after treatment with azacitidine in CD20-negative transformed diffuse large B cell lymphoma after using rituximab.2018

    • Author(s)
      Hiraga J, Tomita A, Suzuki N, Takagi Y, Narita M, Kagami Y.
    • Journal Title

      Ann Hematol.

      Volume: 印刷中 Issue: 11 Pages: 2253-2255

    • DOI

      10.1007/s00277-018-3354-1

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Intratumoral evaluation of 3D microvasculature and nanoparticle distribution using a gadolinium-dendron modified nano-liposomal contrast agent with magnetic resonance micro-imaging.2018

    • Author(s)
      Nitta N, Takakusagi Y, Kokuryo D, Shibata S, Tomita A, Higashi T, Aoki I, Harada M.
    • Journal Title

      Nanomedicine.

      Volume: 14(4) Issue: 4 Pages: 1315-1324

    • DOI

      10.1016/j.nano.2018.03.006

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Rearrangement of VPS13B, a causative gene of Cohen syndrome, in a case of RUNX1-RUNX1T1 leukemia with t(8;12;21).2017

    • Author(s)
      Abe A, Yamamoto Y, Katsumi A, Okamoto A, Tokuda M, Inaguma Y, Yamamoto K, Yanada M, Kanie T, Tomita A, Akatsuka Y, Okamoto M, Kameyama T, Mayeda A, Emi N.
    • Journal Title

      Int J Hematol.

      Volume: - Issue: 2 Pages: 208-212

    • DOI

      10.1007/s12185-017-2387-x

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Altered EZH2 splicing and expression is associated with impaired histone H3 lysine 27 tri-Methylation in myelodysplastic syndrome2017

    • Author(s)
      Shirahata-Adachi Mizuho、Iriyama Chisako、Tomita Akihiro、Suzuki Yasuhiro、Shimada Kazuyuki、Kiyoi Hitoshi
    • Journal Title

      Leuk Res

      Volume: 63 Pages: 90-97

    • DOI

      10.1016/j.leukres.2017.10.015

    • NAID

      120006473525

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A nationwide survey of hypoplastic myelodysplastic syndrome (a multicenter retrospective study)2017

    • Author(s)
      Kobayashi T, Nannya Y, Ichikawa M, Oritani K, Kanakura Y, Tomita A, Kiyoi H, Kobune M, Kato J, Kawabata H, Shindo M, Torimoto Y, Yonemura Y, Tohyama K, et al
    • Journal Title

      American Journal of Hematology

      Volume: 92 Issue: 12 Pages: 1324-1332

    • DOI

      10.1002/ajh.24905

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Phase II Study of the Efficacy and Safety of Pembrolizumab for Relapsed/Refractory Classic Hodgkin Lymphoma.2017

    • Author(s)
      Chen R, Zinzani PL, Fanale MA, Armand P, Johnson NA, Brice P, Radford J, Ribrag V, Molin D, Vassilakopoulos TP, Tomita A, von Tresckow B, Shipp MA, Zhang Y, Ricart AD, Balakumaran A, Moskowitz CH; KEYNOTE-087.
    • Journal Title

      J Clin Oncol.

      Volume: 92(12) Issue: 19 Pages: 1324-1332

    • DOI

      10.1200/jco.2016.72.1316

    • Related Report
      2017 Annual Research Report 2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Emetine elicits apoptosis of intractable B-cell lymphoma cells with MYC rearrangement through inhibition of glycolytic metabolism.2017

    • Author(s)
      Aoki T, Shimada K, Sakamoto A, Sugimoto K, Morishita T, Kojima Y, Shimada S, Kato S, Iriyama C, Kuno S, Harada Y, Tomita A, Hayakawa F, Kiyoi H.
    • Journal Title

      Oncotarget.

      Volume: 8 Issue: 8 Pages: 13085-13098

    • DOI

      10.18632/oncotarget.14393

    • Related Report
      2017 Annual Research Report 2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Genetic and Epigenetic Modulation of CD20 Expression in B-Cell Malignancies: Molecular Mechanisms and Significance to Rituximab Resistance.2016

    • Author(s)
      Tomita A.
    • Journal Title

      J Clin Exp Hematop.

      Volume: 56 Pages: 89-99

    • NAID

      130005433863

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Japanese phase II study of rituximab maintenance for untreated indolent B-cell non-Hodgkin lymphoma with high tumor burden.2016

    • Author(s)
      Igarashi T, Ogura M, Itoh K, Taniwaki M, Ando K, Kuroda Y, Yamamoto K, Uike N, Tomita A, Nagai H, Kurosawa M, Mori S, Nawano S, Terauchi T, Ohashi Y, Tobinai K.
    • Journal Title

      Int J Hematol.

      Volume: 104 Pages: 700-708

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] SPIB is a novel prognostic factor in diffuse large B-cell lymphoma that mediates apoptosis via the PI3K-AKT pathway.2016

    • Author(s)
      2.Takagi Y, Shimada K*, Shimada S, Sakamoto A, Naoe T, Nakamura S, Hayakawa F, Tomita A, Kiyoi H.
    • Journal Title

      Cancer Sci.

      Volume: 107 Issue: 9 Pages: 1270-1280

    • DOI

      10.1111/cas.13001

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Peripheral blood cell-free DNA is an alternative tumor DNA source reflecting disease status in myelodysplastic syndromes.2016

    • Author(s)
      Suzuki Y, Tomita A, Nakamura F, Iriyama C, Shirahata-Adachi M, Shimada K, Akashi A, Ishikawa Y, Kaneda N, Kiyoi H.
    • Journal Title

      Cancer Sci.

      Volume: 107 Issue: 9 Pages: 1329-37

    • DOI

      10.1111/cas.12994

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Live-cell single-molecule imaging of the cytokine receptor MPL for analysis of dynamic dimerization.2016

    • Author(s)
      Sakamoto A, Tsukamoto T, Furutani Y, Sudo Y, Shimada K, Tomita A, Kiyoi H, Kato T, Funatsu T.
    • Journal Title

      J Mol Cell Biol.

      Volume: 8 Pages: 553-555

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Live-cell single-molecule imaging of the cytokine receptor MPL for analysis of dynamic Dimerization.2016

    • Author(s)
      Akihiko Sakamoto, Takashi Tsukamoto, Yuji Furutani, Yuki Sudo, Kazuyuki Shimada, Akihiro Tomita, Hitoshi Kiyoi, Takashi Kato, and Takashi Funatsu.
    • Journal Title

      J Mol Cell Biol.

      Volume: in press

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Development and analysis of patient derived xenograft mouse models in intravascular large B-cell lymphoma.2016

    • Author(s)
      Kazuyuki Shimada, Satoko Shimada , Keiki Sugimoto , Masahiro Nakatochi , Miyuki Katayama , Akihiro Hirakawa , Toby Hocking , Ichiro Takeuchi , Takashi Tokunaga , Yusuke Takagi , Akihiko Sakamoto , Tomohiro Aoki , Tomoki Naoe , Shigeo Nakamura , Fumihiko Hayakawa , Masao Seto , Akihiro Tomita , Hitoshi Kiyoi.
    • Journal Title

      Leukemia

      Volume: in press

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Nodular lymphocyte predominant Hodgkin lymphoma: Clincopathological study of 25 cases from Japan with a reappraisal of tissue associated macrophages.2015

    • Author(s)
      Eladl AE, Satou A, Elsayed AA, Suzuki Y, Shimizu-Kohno K, Kato S, Tomita A, Kinoshita T, Nakamura S, Asano N.
    • Journal Title

      Pathol Int.

      Volume: 65 Issue: 12 Pages: 652-60

    • DOI

      10.1111/pin.12357

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Discovery of a drug targeting microenvironmental support for lymphoma cells by screening using patient-derived xenograft cells2015

    • Author(s)
      Sugimoto K, Hayakawa F, Shimada S, Morishita T, Shimada K, Katakai T, Tomita A, Kiyoi H, Naoe T
    • Journal Title

      Scientific Reports

      Volume: 5 Issue: 1 Pages: 13054-13054

    • DOI

      10.1038/srep13054

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Monitoring of Hepatitis B Virus (HBV) DNA and Risk of HBV Reactivation in B-cell Lymphoma: A prospective observational study.2015

    • Author(s)
      Kusumoto S, Tomita A, et al. (35名中27番目)
    • Journal Title

      Clin Infect Dis.

      Volume: 61 Issue: 5 Pages: 719-29

    • DOI

      10.1093/cid/civ344

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Successful treatment of refractory cold hemagglutinemia in MYD88 L265P mutation-negative Waldenstrom's macroglobulinemia with bortezomib.2015

    • Author(s)
      Izumi M, Tsunemine H, Suzuki Y, Tomita A, Kusumoto T, Kodaka T, Itoh K, Takahashi T.
    • Journal Title

      Int J Hematol

      Volume: epub Issue: 2 Pages: 238-43

    • DOI

      10.1007/s12185-015-1775-3

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Presentation] Detection of Recurrent Genetic Mutations in Intravascular Large B-Cell Lymphoma By Comprehensive Genetic Analyses Using Peripheral Blood Circulating Cell-Free DNA.2017

    • Author(s)
      Akihiro Tomita, Kazuyuki Shimada, Kenichi Yoshida, Yasuhiro Suzuki, Chisako Iriyama, Masashi Sanada, Masaaki Yuge, Yusuke Takagi, Shigeru Kusumoto, Yasufumi Masaki, Takahiko Ito, Yuichiro Inagaki, Akinao Okamoto, Yuichi Shiraishi, Kenichi Chiba, Hiroko Tanaka, Satoru Miyano, Seishi Ogawa and Hitoshi Kiyoi.
    • Organizer
      59th Annual meeting od American Society of Hematology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 成人リンパ腫領域におけるデータストレージ構築とクリニカルシークエンス.2017

    • Author(s)
      冨田章裕
    • Organizer
      国立がん研究センターがん研究開発費 29-A-3「成人固形がんに対する標準治療確立のための基盤研究」班(大江班)、「難治性リンパ腫小班」(山口小班) 班会議
    • Related Report
      2017 Annual Research Report
  • [Presentation] Peripheral blood circulating cell-free DNA (PBcfDNA) - an alternative tumor DNA source in malignant lymphoma -.2017

    • Author(s)
      Akihiro Tomita
    • Organizer
      第57回日本リンパ網内系学会総会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] リンパ腫の臨床現場で遺伝子変異解析を行うことの意義2017

    • Author(s)
      冨田章裕
    • Organizer
      第 3 回リンパ腫分子病態研究会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 再発又は難治性古典的ホジキンリンパ腫患者を 対象とした MK-3475 の第 2 相試験2017

    • Author(s)
      Akihiro Tomita、et. al.
    • Organizer
      第 79 回日本血液学会学術集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Pembrolizumab in Relapsed/Refractory Classical Hodgkin Lymphoma: Primary End Point Analysis of the Phase 2 Keynote-087 Study2016

    • Author(s)
      Craig H Moskowitz, Akihiro Tomita (17名中10番目)
    • Organizer
      American Society of Hematology, 58th Annual Meeting & Exposition
    • Place of Presentation
      San Diego Convention Center, San Diego, CA, USA,
    • Year and Date
      2016-12-05
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Emetine Elicits Apoptosis of Intractable B-Cell Lymphoma Cells with MYC Rearrangement through Inhibition of Glycolytic Metabolism2016

    • Author(s)
      Tomohiro Aoki, Kazuyuki Shimada, Akihiko Sakamoto, Keiki Sugimoto, Takanobu Morishita, Yuki Kojima, Satoko Shimada, Seiichi Kato, Chisako Iriyama, Shunsuke Kuno, Yasuhiko Harada, Shigeo Nakamura, Akihiro Tomita, Fumihiko Hayakawa and Hitoshi Kiyoi
    • Organizer
      American Society of Hematology, 58th Annual Meeting & Exposition
    • Place of Presentation
      San Diego Convention Center, San Diego, CA, USA,
    • Year and Date
      2016-12-04
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Discovering the novel drug targeting tumor-microenvironment for intractable lymphoma2016

    • Author(s)
      青木智広、島田和之、坂本明彦、森下喬允、原田靖彦、入山智沙子、早川文彦、冨田章裕、清井仁
    • Organizer
      第78回日本血液学会学術集会
    • Place of Presentation
      パシフィコ横浜、横浜
    • Year and Date
      2016-10-15
    • Related Report
      2016 Research-status Report
  • [Presentation] Possibility of retreatment with bendamustine-rituximab in relapsed/refractory mantle cell lymphoma2016

    • Author(s)
      伊藤佳織、岡本昌隆、稲熊容子、岡本晃直、徳田倍将、安藤舞子、安藤洋介、柘植雅大、加藤梓沙、島戸茜、林高弘、冨田章裕、赤塚美樹、山田成樹、恵美宣彦
    • Organizer
      第78回日本血液学会学術集会
    • Place of Presentation
      パシフィコ横浜、横浜
    • Year and Date
      2016-10-14
    • Related Report
      2016 Research-status Report
  • [Presentation] Relationship between tissue EBV-DNA copy number and pathological classification/subtypes in LPDs2016

    • Author(s)
      岡本晃直、岡本昌隆、冨田章裕、稲熊容子、徳田倍将、柳田正光、蟹江匡治、山本幸也、赤塚美樹、吉川哲史、恵美宣彦
    • Organizer
      第78回日本血液学会学術集会
    • Place of Presentation
      パシフィコ横浜、横浜
    • Year and Date
      2016-10-13
    • Related Report
      2016 Research-status Report
  • [Presentation] Transcriptional activation of PDGFRA and GSX2 by ETV6 translocation in a case of AML with t(4;12)2016

    • Author(s)
      安部明弘、水田秀一、山本幸也、岡本晃直、伊庭佐知子、徳田倍将、稲熊容子、柳田正光、森島聡子、蟹江匡治、冨田章裕、赤塚美樹、岡本昌隆、亀山俊樹、前田明、恵美宣彦
    • Organizer
      第78回日本血液学会学術集会
    • Place of Presentation
      パシフィコ横浜、横浜
    • Year and Date
      2016-10-13
    • Related Report
      2016 Research-status Report
  • [Presentation] Utilization of Peripheral Blood Cell-Free DNA in Myelodysplastic Syndromes: Clinical and Molecular Characteristics and Utilization for Genetic Analyses Using Conventional and Next-Generation Strategies.2015

    • Author(s)
      Akihiro Tomita, Yasuhiro Suzuki, Fumika Nakamura, Chisako Iriyama, Mizuho Shirahata-Adachi, Kazuyuki Shimada, Akimi Akashi, Yuichi Ishikawa, Norio Kaneda, Hitoshi Kiyoi.
    • Organizer
      The American Society of Hematology, 57th Annual Meeting.
    • Place of Presentation
      Orlando, FL, USA
    • Year and Date
      2015-12-06
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] MDS における遺伝子異常とその臨床的意義 - 分子異常によって引きおこ される多彩な臨床所見 -2015

    • Author(s)
      冨田章裕
    • Organizer
      第77 回 日本血液学会総会 (コーポレートセミナー)
    • Place of Presentation
      金沢、ホテル日航金沢
    • Year and Date
      2015-10-17
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 悪性リンパ腫における治療抵抗性メカニズムとその克服について.2015

    • Author(s)
      冨田章裕
    • Organizer
      日本 リンパ網内系学会第4 回リンパ腫スキルアップセミナー(コーポレートセミナー)
    • Place of Presentation
      京都、京都テルサ
    • Year and Date
      2015-09-26
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Genetic analyses using peripheral blood cell-free DNA in DLBCL.2015

    • Author(s)
      冨田章裕
    • Organizer
      第55 回 日 本リンパ網内系学会総会 (シンポジウム、英語)
    • Place of Presentation
      岡山、岡山コンベンションセンター
    • Year and Date
      2015-07-10
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Clinical and Molecular Significance of Peripheral Blood Cell-Free DNA in Myelodysplastic Syndromes.2015

    • Author(s)
      Yasuhiro Suzuki, Akihiro Tomita, Chisako Iriyama, Mizuho Shirahata, Kazuyuki Shimada, Akimi Akashi, Yuichi Ishikawa, Hitoshi Kiyoi.
    • Organizer
      JSH International Synposium,
    • Place of Presentation
      Karuizawa, Japan
    • Year and Date
      2015-05-22
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Book] 今日の治療指針20172017

    • Author(s)
      冨田章裕
    • Total Pages
      1999
    • Publisher
      医学書院
    • Related Report
      2016 Research-status Report
  • [Book] EBM血液疾患の治療2017-20182017

    • Author(s)
      冨田章裕
    • Total Pages
      541
    • Publisher
      中外医学社
    • Related Report
      2016 Research-status Report
  • [Book] 血液疾患最新の治療2017-20192017

    • Author(s)
      冨田章裕
    • Total Pages
      370
    • Publisher
      南江堂
    • Related Report
      2016 Research-status Report
  • [Book] 血液科 研修ノート2017

    • Author(s)
      冨田章裕
    • Total Pages
      560
    • Publisher
      診断と治療社
    • Related Report
      2016 Research-status Report
  • [Book] 造血器腫瘍アトラス第5版2016

    • Author(s)
      冨田章裕
    • Total Pages
      863
    • Publisher
      日本医事新報社
    • Related Report
      2016 Research-status Report 2015 Research-status Report
  • [Book] 血液疾患最新の治療2017-20192016

    • Author(s)
      冨田章裕
    • Publisher
      南江堂
    • Related Report
      2015 Research-status Report
  • [Book] 血液科 研修ノート2016

    • Author(s)
      冨田章裕
    • Publisher
      診断と治療社
    • Related Report
      2015 Research-status Report
  • [Book] 今日の治療指針 2017年版2016

    • Author(s)
      冨田章裕
    • Publisher
      医学書院
    • Related Report
      2015 Research-status Report
  • [Book] IMiDs 基礎と臨床20152015

    • Author(s)
      冨田章裕
    • Total Pages
      234
    • Publisher
      メディカルレビュー社
    • Related Report
      2015 Research-status Report
  • [Book] 日本臨牀 増刊号 「リンパ腫学」2015

    • Author(s)
      冨田章裕
    • Total Pages
      695
    • Publisher
      日本臨牀社
    • Related Report
      2015 Research-status Report
  • [Book] 悪性リンパ腫治療マニュアル改訂第4版2015

    • Author(s)
      冨田章裕
    • Total Pages
      325
    • Publisher
      南江堂
    • Related Report
      2015 Research-status Report
  • [Book] 白血病・リンパ腫 薬物療法ハンドブック2015

    • Author(s)
      冨田章裕
    • Publisher
      南江堂
    • Related Report
      2015 Research-status Report
  • [Book] 血液疾患 診断・治療指針2015

    • Author(s)
      冨田章裕
    • Total Pages
      560
    • Publisher
      中山書店
    • Related Report
      2015 Research-status Report
  • [Book] 白血病診療Q&A 一つ上を行く診療の実践2015

    • Author(s)
      冨田章裕
    • Total Pages
      280
    • Publisher
      中外医学社
    • Related Report
      2015 Research-status Report
  • [Book] EBM がん化学療法・分子標的治療法2015

    • Author(s)
      冨田章裕
    • Total Pages
      713
    • Publisher
      中外医学社
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2019-03-29  

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