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Microbiome analysis of apical periodontitis and cellulitis in oral cavity

Research Project

Project/Area Number 15K11023
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Morphological basic dentistry
Research InstitutionTokyo Dental College

Principal Investigator

ISHIHARA Kazuyuki  東京歯科大学, 歯学部, 教授 (00212910)

Co-Investigator(Kenkyū-buntansha) 村松 敬  東京歯科大学, 歯学部, 准教授 (00276982)
菊池 有一郎  東京歯科大学, 歯学部, 助教 (30410418)
柴山 和子  東京歯科大学, 歯学部, 講師 (60408317)
国分 栄仁  東京歯科大学, 歯学部, 講師 (70453785)
Co-Investigator(Renkei-kenkyūsha) YAMASHITA Yoshihisa  九州大学, 歯学部, 教授 (20192403)
MURAMATSU Kyotaro  東京歯科大学, 歯学部, 助教 (90507328)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2017: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords根尖性歯周炎 / マイクロバイオーム / 16S rRNA pyrosequencing / Prevotella / Porphyromonas / Fusobacterium / Parvimonas / Polymicrobial infection / 網羅的解析 / Pyrosequencing / Dysbiosis / 細菌叢 / 口腔底蜂窩織炎 / 歯根嚢胞 / 蜂窩織炎 / メタ16S rRNA 解析 / 口腔細菌 / 歯周炎 / バイオフィルム / Quorum sensing
Outline of Final Research Achievements

In the lesion of apical periodontitis, approximately 55 species of bacteria were detected. Among them, predominant genera were Prevotella, Porphyromonas, Parvimonas, Peptostreptococcus, Fusobacterium. The microbiome was different between the lesion in single space and the lesion with multi space. We also detected the difference in microbiome between the lesion with bleeding and the lesion with discharge of pus. These data suggest the association between the clinical condition and microbiome of the lesion.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (40 results)

All 2018 2017 2016 2015

All Journal Article (19 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 19 results,  Open Access: 15 results,  Acknowledgement Compliant: 3 results) Presentation (19 results) (of which Int'l Joint Research: 5 results,  Invited: 1 results) Book (2 results)

  • [Journal Article] Response of epithelial cells infected by Treponema denticola2018

    • Author(s)
      Kokubu E, Inoue T, Ishihara K.
    • Journal Title

      Oral disease

      Volume: 24 Issue: 1-2 Pages: 14-18

    • DOI

      10.1111/odi.12794

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Corrosion behavior of titanium in response to sulfides produced by Porphyromonas gingivalis2018

    • Author(s)
      Harada Rino、Kokubu Eitoyo、Kinoshita Hideaki、Yoshinari Masao、Ishihara Kazuyuki、Kawada Eiji、Takemoto Shinji
    • Journal Title

      Dent Mater

      Volume: 34 Issue: 2 Pages: 183-191

    • DOI

      10.1016/j.dental.2017.10.004

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Effect of Porphyromonas gingivalis infection in the placenta and umbilical cord in pregnant mice with low birth weight2018

    • Author(s)
      Udagawa Sayuri、Katagiri Sayaka、Maekawa Shogo、Takeuchi Yasuo、Komazaki Rina、Ohtsu Anri、Sasaki Naoki、Shiba Takahiko、Watanabe Kazuki、Ishihara Kazuyuki、Sato Noriko、Miyasaka Naoyuki、Izumi Yuichi
    • Journal Title

      Acta Odontologica Scandinavica

      Volume: 15 Issue: 6 Pages: 1-9

    • DOI

      10.1080/00016357.2018.1426876

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] SigCH, an extracytoplasmic function sigma factor of Porphyromonas gingivalis regulates the expression of cdhR and hmuYR2017

    • Author(s)
      Ota Koki、Kikuchi Yuichiro、Imamura Kentaro、Kita Daichi、Yoshikawa Kouki、Saito Atsushi、Ishihara Kazuyuki
    • Journal Title

      Anaerobe

      Volume: 43 Pages: 82-90

    • DOI

      10.1016/j.anaerobe.2016.12.006

    • Related Report
      2017 Annual Research Report 2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] New approach for studying mobile genes using metagenomic analysis2017

    • Author(s)
      Ishihara K.
    • Journal Title

      Oral Dis

      Volume: 印刷中 Issue: 4 Pages: 494-496

    • DOI

      10.1111/odi.12640

    • Related Report
      2017 Annual Research Report 2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Elevation of pro-inflammatory cytokine levels following anti-resorptive drug treatment is required for osteonecrosis development in infectious osteomyelitis2017

    • Author(s)
      Morita M, Iwasaki R, Sato Y, Kobayashi T, Watanabe R, Oike T, Nakamura S, Keneko Y, Miyamoto K, Ishihara K, Iwakura Y, Ishii K, Matsumoto M, Nakamura M, Kawana H, Nakagawa T, Miyamoto T.
    • Journal Title

      Sci Rep

      Volume: 7 Issue: 1 Pages: 46322-46322

    • DOI

      10.1038/srep46322

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Effect of extracytoplasmic function sigma factors on autoaggregation, hemagglutination, and cell surface properties of Porphyromonas gingivalis.2017

    • Author(s)
      Fujise K, Kikuchi Y, Kokubu E, Okamoto-Shibayama K, Ishihara K.
    • Journal Title

      PLoS One

      Volume: 12 Issue: 9 Pages: e0185027-e0185027

    • DOI

      10.1371/journal.pone.0185027

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Antimicrobial susceptibility profiles of oral Treponema species.2017

    • Author(s)
      Okamoto-Shibayama K, Sekino J, Yoshikawa K. Saito A, Ishihara K.
    • Journal Title

      Anaerobe

      Volume: 48 Pages: 242-248

    • DOI

      10.1016/j.anaerobe.2017.10.005

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Possible Involvement of Surface Antigen Protein 2 in the Morphological Transition and Biofilm Formation of <I>Candida albicans</I>2017

    • Author(s)
      Okamoto-Shibayama Kazuko、Kikuchi Yuichiro、Kokubu Eitoyo、Ishihara Kazuyuki
    • Journal Title

      Medical Mycology Journal

      Volume: 58 Issue: 4 Pages: E139-E143

    • DOI

      10.3314/mmj.17-00008

    • NAID

      130006233737

    • ISSN
      2185-6486, 2186-165X
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola2016

    • Author(s)
      Tanaka-Kumazawa K, Kikuchi Y, Sano-Kokubun Y, Shintani S, Yakushiji M, Kuramitsu H K, Ishihara K.
    • Journal Title

      BMC Oral Health

      Volume: 17 Issue: 1 Pages: 18-18

    • DOI

      10.1186/s12903-016-0243-7

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Treponema denticola invasion into human gingival epithelial cell2016

    • Author(s)
      Inagaki S, Kimizuka R, Kokubu E, Saito A, Ishihara K.
    • Journal Title

      Microb Pathog

      Volume: 94 Pages: 104-111

    • DOI

      10.1016/j.micpath.2016.01.010

    • Related Report
      2016 Research-status Report 2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Antimicrobial susceptibility of microorganisms isolated from periapical periodontitis lesions2016

    • Author(s)
      Narita M, Shibahara T, Takano N, Fujii R, Okuda K, Ishihara K.
    • Journal Title

      Bull Tokyo Dent Coll

      Volume: 52 Issue: 3 Pages: 133-142

    • DOI

      10.2209/tdcpublication.2015-0018

    • NAID

      130005418903

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Role of mitogen-activated protein kinase pathways in migration of gingival epithelial cells in response to stimulation by cigarette smoke condensate and infection by Porphyromonas gingivalis2016

    • Author(s)
      Imamura K, Kokubu E, Kita D, Ota K, Yoshikawa K, Ishihara K, Saito A
    • Journal Title

      J Periodont Res

      Volume: 掲載確定 Issue: 5 Pages: 613-621

    • DOI

      10.1111/jre.12341

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Involvement of luxS in biofilm formation by Capnocytophaga ochracea2016

    • Author(s)
      Hosohama-Saito K, Kokubu E, Okamoto-Shibayama K, Kita D, Kamakura A, Ishihara K
    • Journal Title

      ProS One

      Volume: 11 Issue: 1 Pages: e0147114-e0147114

    • DOI

      10.1371/journal.pone.0147114

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Involvement of the type IX secretion system in the gliding motility and biofilm formation of Capnocytophaga ochracea2016

    • Author(s)
      Kita D, Shibata S, Kikuchi Y, Kokubu E, Nakayama K, Saito A, Ishihara K
    • Journal Title

      Appl Environ Microbiol

      Volume: 82 Issue: 6 Pages: 1756-1766

    • DOI

      10.1128/aem.03452-15

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Antimicrobial susceptibility of microorganisms isolated from periapical periodontitis lesions2016

    • Author(s)
      Narita M, Shibahara T, Takano N, Fujii R, Okuda K, Ishihara K
    • Journal Title

      Bull Tokyo Dent Coll

      Volume: 掲載確定

    • NAID

      130005418903

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Inhibitory effects of a novel cationic dodecapeptide [CL(14-25)] derived from cyanate lyase of rice on endotoxic activities of LPSs from Escherichia coli and periodontopathic Aggregatibacter actinomycetemcomitans2015

    • Author(s)
      Takayama S, Hashimoto K, Kokubu E, Taniguchi M, Tajima K, Ochiai A, Saitoh E, Saito A, Ishihara K, Kato T
    • Journal Title

      Microb Pathog

      Volume: 94 Pages: 2-11

    • DOI

      10.1016/j.micpath.2015.08.011

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Point-of-care detection of Tannerella forsythia using an antigen-antibody assisted dielectrophoretic impedance measurement method2015

    • Author(s)
      Ishii Y, Imamura K, Kikuchi Y, Miyagawa S, Hamada R, Sekino J, Sugito H, Ishihara K, Saito A
    • Journal Title

      Micro Pathog

      Volume: 82 Pages: 37-42

    • DOI

      10.1016/j.micpath.2015.03.017

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Evaluation of application possibility of water containing organic acids for chemical denture cleaning for older adults.2015

    • Author(s)
      Izumi S, Ryu M, Ueda T, Ishihara K, Sakurai K.
    • Journal Title

      Geriatr Gerontol Int.

      Volume: 000 Issue: 3 Pages: 000-000

    • DOI

      10.1111/ggi.12467

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Response of epithelial cells infected by T. denticola2018

    • Author(s)
      Kokubu E, Kikuchi Y., Okamoto-Shibayama K, Ishihara K
    • Organizer
      第91回日本細菌学会
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Functional analysis of marR-like gene of Treponema denticola2017

    • Author(s)
      Numata Y, Okamoto-Shibayama K, Sato T, Kikuchi Y, Kokubu E, Ishihara K
    • Organizer
      IADR/AADR/CADR 95th General Session
    • Place of Presentation
      San Francisco
    • Year and Date
      2017-03-22
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Isolation and characterization of dentipain in Treponema denticola2017

    • Author(s)
      Miyai-Murai Y, Okamoto-Shibayama K, Sato T, Numata Y, Ishihara K
    • Organizer
      IADR/AADR/CADR 95th General Session
    • Place of Presentation
      San Francisco
    • Year and Date
      2017-03-22
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Treponema denticola の細胞侵入に影響する病原因子 の解析2017

    • Author(s)
      国分 栄仁, 菊池 有一郎, 柴山 和子, 石原 和幸
    • Organizer
      第90回日本細菌学会総会
    • Place of Presentation
      仙台
    • Year and Date
      2017-03-19
    • Related Report
      2016 Research-status Report
  • [Presentation] Porphyromonas gingivalis の鉄獲得機構における ECFシグマ因子 PGN_0319 の役割2017

    • Author(s)
      菊池 有一郎, 太田 功貴, 柴山 和子, 国分 栄仁, 齋藤 淳, 石原 和 幸
    • Organizer
      第90回日本細菌学会総会
    • Place of Presentation
      仙台
    • Year and Date
      2017-03-19
    • Related Report
      2016 Research-status Report
  • [Presentation] Isolation and characterization of Dentipain in Treponema denticola2017

    • Author(s)
      Miyai, Y. Okamoto-Shibayama, K. Sato, T. Numata, Y. Ishihara, K.
    • Organizer
      95th IADR/AADR/CADR General Session, San Francisco, Calif., USA
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Regulation of gene expression by marR-like gene in Treponema denticola2017

    • Author(s)
      Numata, Y. Okamoto-Shibayama, K. Sato, T. Miyai-Murai, Y. Kikuchi, Y. Kokubu, E. Ishihara, K.
    • Organizer
      95th IADR/AADR/CADR General Session, San Francisco, Calif., USA
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 口腔フローラと全身疾患との関わり 口腔細菌とアテローム性動脈硬化症2017

    • Author(s)
      石原和幸
    • Organizer
      第19回日本臨床腸内微生物学会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Treponema denticola のiron-sulfur cluster-binding protein 調節遺伝子(icbR)の機能解析2017

    • Author(s)
      沼田由美 柴山和子 佐藤亨 菊池有一郎 国分栄仁 石原和幸
    • Organizer
      第59回歯科基礎医学会学術大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Treponema denticolaの細胞侵入に影響する病原因子の解析2017

    • Author(s)
      国分栄仁 菊池有一郎 柴山和子 石原和幸
    • Organizer
      第90回日本細菌学会総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Porphyromonas gingivalis ECFシグマ因子変異株における菌体表層性状の解析2016

    • Author(s)
      菊池有一郎, 国分栄仁, 柴山和子, 大原直也, 中山浩次, 石原和幸
    • Organizer
      第58回歯科基礎医学会学術大会
    • Place of Presentation
      札幌
    • Year and Date
      2016-08-24
    • Related Report
      2016 Research-status Report
  • [Presentation] Treponema denticola marR 様遺伝子の機能解析2016

    • Author(s)
      沼田由美, 柴山和子, 佐藤亨, 菊池有一郎, 国分栄仁, 石原和幸
    • Organizer
      第58回歯科基礎医学会学術大会
    • Place of Presentation
      札幌
    • Year and Date
      2016-08-24
    • Related Report
      2016 Research-status Report
  • [Presentation] Candida albicans Csa2 タンパクの菌糸形増殖における鉄利用への関与2016

    • Author(s)
      柴山和子, 菊池有一郎, 国分栄仁, 石原和幸
    • Organizer
      第89回日本細菌学会総会
    • Place of Presentation
      大阪
    • Year and Date
      2016-03-23
    • Related Report
      2015 Research-status Report
  • [Presentation] Treponema denticola はTLR2 認識と免疫応答を変調させる2016

    • Author(s)
      国分栄仁, 藤瀬 和隆, 菊池 有一郎, 柴山和子, 石原和幸
    • Organizer
      第89回日本細菌学会総会
    • Place of Presentation
      大阪
    • Year and Date
      2016-03-23
    • Related Report
      2015 Research-status Report
  • [Presentation] Porphyromonas gingivalis ECF シグマ因子 変異株の性状解析2016

    • Author(s)
      菊池 有一郎, 藤瀬 和隆, 柴山 和子, 国分 栄仁, 大原 直也, 中山 浩次, 石原 和幸
    • Organizer
      第89回日本細菌学会総会
    • Place of Presentation
      大阪
    • Year and Date
      2016-03-23
    • Related Report
      2015 Research-status Report
  • [Presentation] バイオフィルムによる吸引歯ブラシ汚染の洗浄効果2015

    • Author(s)
      門田枝里子, 石原和幸, 杉山哲也, 長澤恵子, 多田美穂子
    • Organizer
      日本歯科衛生学会 第10回学術大会
    • Place of Presentation
      札幌
    • Year and Date
      2015-09-20
    • Related Report
      2015 Research-status Report
  • [Presentation] Porphyromonas gingivalis ECFシグマ因子変異株の性状解析2015

    • Author(s)
      菊池有一郎, 柴山和子, 国分栄仁, 大原直也, 中山浩次, 石原和幸
    • Organizer
      第57回歯科基礎医学会学術大会
    • Place of Presentation
      新潟市
    • Year and Date
      2015-09-11
    • Related Report
      2015 Research-status Report
  • [Presentation] Porphyromonas gingivalis ECF シグマ因子PGN_0319 の機能解析2015

    • Author(s)
      太田功貴, 菊池有一郎, 今村健太郎, 吉川幸輝, 喜田大智, 藤瀬和隆, 国分栄仁, 齋藤淳, 石原和幸
    • Organizer
      第299回東京歯科大学学会
    • Place of Presentation
      東京
    • Year and Date
      2015-06-06
    • Related Report
      2015 Research-status Report
  • [Presentation] 知的障害者に対する経口アジスロマイシン投与を併用したOne-stage full-mouth disinfectionの効果2015

    • Author(s)
      関野仁, 重枝昭広, 石井里加子, 小暮弘子, 吉岡真由美, 笹川百吏子, 荒井綾子, 後藤悦子, 岩佐美里, 森谷佳織, 八島章博, 長野孝俊, 中川種昭, 石原和幸, 齋藤淳, 五味一博
    • Organizer
      第58回春季日本歯周病学会学術大会
    • Place of Presentation
      千葉
    • Year and Date
      2015-05-15
    • Related Report
      2015 Research-status Report
  • [Book] 病原細菌・ウイルス図鑑2017

    • Author(s)
      石原和幸、奥田克爾 著 分担
    • Total Pages
      916
    • Publisher
      北海道大学出版会
    • ISBN
      9784832982291
    • Related Report
      2017 Annual Research Report
  • [Book] 口腔微生物学 -感染と免疫ー2015

    • Author(s)
      石原和幸他 共著
    • Total Pages
      431
    • Publisher
      学建書院
    • Related Report
      2015 Research-status Report

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Published: 2015-04-16   Modified: 2019-03-29  

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