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Analysis of cohesin acetyltransferase on transcriptional regulation

Research Project

Project/Area Number 16H04718
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Genome biology
Research InstitutionThe University of Tokyo

Principal Investigator

Bando Masashige  東京大学, 定量生命科学研究所, 助教 (90360627)

Co-Investigator(Kenkyū-buntansha) 中戸 隆一郎  東京大学, 定量生命科学研究所, 助教 (60583044)
Research Collaborator Minamino Masashi  
Sakata Toyonori  
Yoshimura Atsunori  
Ishibashi Mai  
Project Period (FY) 2016-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥15,860,000 (Direct Cost: ¥12,200,000、Indirect Cost: ¥3,660,000)
Fiscal Year 2018: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2017: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2016: ¥5,720,000 (Direct Cost: ¥4,400,000、Indirect Cost: ¥1,320,000)
Keywordsコヒーシン / 転写制御 / アセチル化 / DNA複製 / ゲノム構造 / アセチル化酵素 / コヒーシンローダー / 転写 / 転写伸長 / 転写調節 / ループ構造 / メディエーター / MCMヘリカーゼ / コヒージョン / Esco / ゲノム
Outline of Final Research Achievements

Cohesin regulates transcription through genome structure, but their detail molecular mechanisms are unknown. The dynamics of many proteins in the genome during the activation of transcription was analyzed using the in vitro assay system. And we observed the assembly of the cohesin loader, SEC, and ESCO1 in the addition of the preinitiation complex (PIC) on the template DNA. Cohesin loader was stably associated with PIC during the pausing. Moreover, the association of the cohesin loader and the SEC to the PIC may be competitive.
ESCO1 and ESCO2, unlike cohesin, were found to locally affect genome structure, resulting in changes in gene expression. In addition, we found a new mechanism in which ESCO2 is activated by binding to MCM and is degraded when it is dissociated from MCM.

Academic Significance and Societal Importance of the Research Achievements

コヒーシンがゲノム構造を構築する重要な因子で、広く生理的な機能に重要な役割を担うことは知られているが、その詳細な機構についてはほとんど知られていない。本成果で用いたin vitroアッセイ系は、転写制御における分子機能に焦点を絞った解析を進めることができ、コヒーシン機能だけなく幅広い転写制御のメカニズムへの展開が期待される。また、本成果のESCOの機能や制御機構の理解は、コヒーシンと深く関わる癌や遺伝病の発症メカニズムの解明やその治療の標的分子として意義がある。

Report

(4 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • Research Products

    (7 results)

All 2019 2018 2017 2016

All Journal Article (3 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 2 results,  Open Access: 2 results) Presentation (4 results) (of which Int'l Joint Research: 3 results)

  • [Journal Article] Cornelia de Lange syndrome, related disorders, and the Cohesin complex: Abstracts from the 8th biennial scientific and educational symposium 2018.2019

    • Author(s)
      Kline AD, Krantz ID, Bando M, Shirahige K, Chea S, Sakata T, Rao S, Dorsett D, Singh VP, Gerton JL, Horsfield JA, Calof AL, Katz O, Grados M, Raible S, Baranano K, Lyon G, Musio A, Carrico CS, Clemens DK, Caudill P, Massa V, McGill BE, Dommestrup A, O'Connor J, Haaland RE.
    • Journal Title

      Am J Med Genet A.

      Volume: Mar 15 Issue: 6 Pages: 1-11

    • DOI

      10.1002/ajmg.a.61108

    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Journal Article] Temporal Regulation of ESCO2 Degradation by the MCM Complex, the CUL4-DDB1-VPRBP Complex, and the Anaphase-Promoting Complex.2018

    • Author(s)
      Minamino M, Tei S, Negishi L, Kanemaki MT, Yoshimura A, Sutani T, Bando M, Shirahige K.
    • Journal Title

      Curr Biol.

      Volume: 28(16) Issue: 16 Pages: 2665-2672

    • DOI

      10.1016/j.cub.2018.06.037

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Decreased cohesion in the brain leads to defective synapse development and anxiety-related behavior2017

    • Author(s)
      Fujita Y, Masuda K, Bando M, Nakato R, Katou Y, Tanaka T, Nakayama M, Takao K, Miyakawa T, Tanaka T, Ago Y, Hashimoto H, Shirahige K, Yamashita T.
    • Journal Title

      J. Exp. Med.

      Volume: 印刷中 Issue: 5 Pages: 1431-1452

    • DOI

      10.1084/jem.20161517

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] The Study for Molecular Function and Dynamics of Nipbl in Transcriptional Regulation using Biochemical Approach2018

    • Author(s)
      Masashige Bando
    • Organizer
      Eighth Biennial Cornelia de Lange Syndrome Scientific & Educational Symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Analysis of Cohesin loader on transcriptional regulatory complex during the activation in vitro system2017

    • Author(s)
      Masashige Bando
    • Organizer
      SMC proteins
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Cohesin loader regulates transition from pausing to elongation of RNA PolII2016

    • Author(s)
      Masashige Bando, Kazuhiro Akiyama, Ryuichiro Nakato, Katsuhiko Shirahige
    • Organizer
      Epigenetics and chromatin, cold spring harbor meeting
    • Place of Presentation
      Cold spring harbor (USA)
    • Year and Date
      2016-09-13
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 第68回 日本細胞生物学会大会2016

    • Author(s)
      坂東優篤
    • Organizer
      Epigenetics and chromatin, cold spring harbor meeting
    • Place of Presentation
      京都テルサ(京都府・京都市)
    • Year and Date
      2016-06-14
    • Related Report
      2016 Annual Research Report

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Published: 2016-04-21   Modified: 2020-03-30  

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