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Identification of the components of heat-responsible novel nuclear body containing MALAT1, a long noncoding RNA

Research Project

Project/Area Number 16H06743
Research Category

Grant-in-Aid for Research Activity Start-up

Allocation TypeSingle-year Grants
Research Field Biological pharmacy
Research InstitutionThe University of Tokyo

Principal Investigator

Onoguchi Rena  東京大学, アイソトープ総合センター, 特任助教 (30780697)

Project Period (FY) 2016-08-26 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Fiscal Year 2017: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2016: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
KeywordsノンコーディングRNA / 核内構造体 / 熱ストレス応答 / ストレス応答 / 長鎖ノンコーディングRNA
Outline of Final Research Achievements

Previously I found that localization of MALAT1 long noncoding RNA was altered and formed novel nuclear bodies in heat shock condition. In this project, I tried to identify the MALAT1-binding proteins as components of heat-inducible MALAT1 containing nuclear bodies. I initially fixed the experimental condition of affinity purification of MALAT1 RNA: proteins complexes. I identified the 70 kinds of proteins as MALAT1-binding proteins in heat shock condition. Because MALAT1-binding proteins contain the transcription factors and the splicing factors, the heat-inducible MALAT1-containing nuclear bodies may regulate transcription or splicing in heat shock response.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Annual Research Report
  • Research Products

    (4 results)

All 2018 2017

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 2 results) Presentation (1 results)

  • [Journal Article] Identification of Minimal p53 Promoter Region Regulated by MALAT1 in Human Lung Adenocarcinoma Cells.2018

    • Author(s)
      Tano K, Onoguchi-Mizutani R, Yeasmin F, Uchiumi F, Suzuki Y, Yada T, Akimitsu N
    • Journal Title

      frontiers in Genetics

      Volume: なし Pages: 208-208

    • DOI

      10.3389/fgene.2017.00208

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 5'-Bromouridine IP Chase (BRIC)-Seq to Determine RNA Half-Lives.2018

    • Author(s)
      Yamada T, Imamachi N, Onoguchi-Mizutani R, Imamura K, Suzuki Y, Akimitsu N.
    • Journal Title

      Methods Mol Biol.

      Volume: 1720 Pages: 1-13

    • DOI

      10.1007/978-1-4939-7540-2_1

    • ISBN
      9781493975396, 9781493975402
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Techniques for genome-wide expression analysis of non-coding RNA.2017

    • Author(s)
      Rena Mizutani, Toshimichi Yamada, Nobuyoshi Akimitsu
    • Journal Title

      Handbook of Epigenetics, 2nd Edition

      Volume: 印刷中

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Presentation] 長鎖非コードRNA, MALAT1を含有する新規核内構造体を介した熱ショック応答機構の解明2017

    • Author(s)
      小野口(水谷)玲菜、 鈴木穣、 川村猛、秋光信佳
    • Organizer
      2017年度生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report

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Published: 2016-09-02   Modified: 2019-03-29  

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