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Ecology and physiology of anaerobic protists in marine sediments

Research Project

Project/Area Number 16K07828
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Aquatic bioproduction science
Research InstitutionFukui Prefectural University

Principal Investigator

Kondo Ryuji  福井県立大学, 海洋生物資源学部, 教授 (30244528)

Co-Investigator(Kenkyū-buntansha) 高尾 祥丈  福井県立大学, 海洋生物資源学部, 准教授 (00511304)
Project Period (FY) 2016-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2018: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2017: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywords嫌気 / 底泥 / 鞭毛虫 / 原生生物 / 現存量 / 多様性 / 嫌気性鞭毛虫 / 日向湖 / ラビリンチュラ / 18S rDNA / 微小鞭毛虫 / 集積培養 / 微生物食物網 / 嫌気環境
Outline of Final Research Achievements

Abundance and community composition of benthic heterotrophic nanoflagellates (HNF) were investigated in the surface layer of anoxic bottom sediment in the saline Lake Hiruga, Fukui, Japan. HNF cells were recovered from the sediment samples by Percoll density gradient centrifugation and were counted by epifluorescence microscopy. The HNF abundance in the anoxic sediment was 10- to 100-fold higher than that in oxic water column of the lake. Sequences of the V4-V5 hypervariable region of 18S rRNA genes were analysed using high throughput sequencing (HTS). Application of an HTS technique indicated immense protist diversity and potentially novel phyla in anoxic sediments of the lake. Our comprehensive analyses of HNF abundance and diversity provide a blueprint for the further understanding of ecological roles of HNF in anoxic sediment microbial food web.

Academic Significance and Societal Importance of the Research Achievements

水圏の嫌気的な底泥中の微生物の現存量や多様性については、原核微生物については多くの研究がなされてきたが、真核微生物に関する研究は殆どなかった。硫化水素が多量に蓄積するような嫌気的な環境でも、高い現存量で鞭毛虫が存在し、その多様性が極めて高いことが、本研究で明らかとなった。嫌気的な底泥では、発酵細菌や硫酸還元菌などの嫌気性細菌がその役割を分担しながら有機物分解を担っているとされてきたが、細菌摂食を行う多様な原生生物が多量に存在することが明らかになったことは、嫌気環境での有機物の分解過程や物質循環過程を再考する機会を与え、その学術的意義は大きいと考えられる。

Report

(5 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • 2016 Research-status Report
  • Research Products

    (8 results)

All 2019 2018 2017 2016

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 1 results) Presentation (5 results) (of which Invited: 2 results)

  • [Journal Article] Protistan community composition in anoxic sediments from three salinity-disparate Japanese lakes2019

    • Author(s)
      Kataoka Takafumi、Kondo Ryuji
    • Journal Title

      Estuarine, Coastal and Shelf Science

      Volume: 224 Pages: 34-42

    • DOI

      10.1016/j.ecss.2019.04.046

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Data on taxonomic annotation and diversity of 18S rRNA gene amplicon libraries derived from high throughput sequencing2019

    • Author(s)
      Kataoka Takafumi、Kondo Ryuji
    • Journal Title

      Data in Brief

      Volume: 25 Pages: 104213-104213

    • DOI

      10.1016/j.dib.2019.104213

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Spatiotemporal shift in sulphide concentration in hypolimnic water column in Lake Hiruga, a saline lake in Japan2018

    • Author(s)
      R. Kondo, M. Momoki, M. Yamamoto, A. Kaneda
    • Journal Title

      Limnology

      Volume: 印刷中 Issue: 3 Pages: 277-283

    • DOI

      10.1007/s10201-018-0541-7

    • NAID

      40021626753

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Presentation] 水圏の嫌気環境における従属栄養性原生生物-現存量、多様性、生理・生態-2019

    • Author(s)
      近藤竜二、片岡剛文
    • Organizer
      日本微生物生態学会第33回大会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 水圏堆積物中の嫌気性鞭毛虫-現存量・多様性・培養-2018

    • Author(s)
      近藤竜二、片岡剛文、中野伸一
    • Organizer
      平成30年度日本水産学会春季大会
    • Related Report
      2017 Research-status Report
  • [Presentation] 嫌気的な湖底堆積物中の原生生物の群集組成2017

    • Author(s)
      片岡剛文、田仲あいら、前川鈴香、中野伸一、近藤竜二
    • Organizer
      環境微生物系学会合同大会
    • Related Report
      2017 Research-status Report
  • [Presentation] 大量塩基配列解析を用いた湖沼堆積物中の真核微生物群集の解析2017

    • Author(s)
      片岡剛文、近藤竜二
    • Organizer
      日本珪藻学会第37回研究集会(福井)
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] 湖沼の嫌気堆積物中の従属栄養性微小鞭毛虫の現存量2016

    • Author(s)
      88.前川鈴香、田仲あいら、近藤竜二、片岡剛文、高尾祥丈、中野伸一
    • Organizer
      平成28年度日本水産学会中部支部大会
    • Place of Presentation
      福井県立大学小浜キャンパス
    • Year and Date
      2016-12-03
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2021-02-19  

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