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Genome-wide analysis of MYB3R transcription factors in tomato and its genome editing

Research Project

Project/Area Number 16K14850
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Horticultural science
Research InstitutionNagoya University

Principal Investigator

Shiratake Katsuhiro  名古屋大学, 生命農学研究科, 准教授 (90303586)

Co-Investigator(Renkei-kenkyūsha) ITO Masaki  名古屋大学, 大学院生命農学研究科, 准教授 (10242851)
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2017: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2016: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsトマト / ゲノム編集 / MYB3R転写因子 / 果実サイズ改変 / 細胞分裂 / 果実大型化
Outline of Final Research Achievements

Genome-wide analysis of MYB3R transcription factors, which regulate cell division, revealed existence 4 MYB3Rs (SlMYB3R1-4) in tomato. Pyrogenetic tree and gene expression analysis of SlMYB3R1-4 in various tomato organs suggested that SlMYB3R1 and SlMYB3R2 activate cell division in fruit, SlMYB3R3 suppresses cell division in fruit, and SlMYB3R4 promotes endoreduplication in mature fruit. To change tomato fruit size, genome editing of SlMYB3R3 was performed. The knockout tomato plants of SlMYB3R3 were produced by CRISPR/Cas9 technology. The knockout tomato plants set elongated fruits and occasionally peanut-like fruits.

Academic Significance and Societal Importance of the Research Achievements

本研究において,トマトで細胞分裂の制御に関わる4種類のMYB3R(SlMYB3R1~4)の存在を明らかにし, SlMYB3R1とSlMYB3R2が果実の細胞分裂に,SlMYB3R3が果実の細胞分裂の停止に,SlMYB3R4が果実成熟期のエンドリデュプリケーション(核内倍化)の誘導に関わる可能性を示したことは,植物生理学上の学術的意義が大きい.また,SlMYB3R3のゲノム編集トマトの作出により,トマトの果実の形を変えることに成功したことは,園芸作物の育種の観点から社会的意義が大きい.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (12 results)

All 2018 2017 2016

All Journal Article (3 results) (of which Peer Reviewed: 2 results,  Open Access: 2 results) Presentation (9 results) (of which Invited: 5 results)

  • [Journal Article] ゲノム編集による作物育種2018

    • Author(s)
      白武勝裕
    • Journal Title

      バイオテック東海

      Volume: 82 Pages: 8-13

    • Related Report
      2017 Annual Research Report
  • [Journal Article] Studies for Absorption of Formaldehyde by Using Foliage on Wild Tomato Species2018

    • Author(s)
      Kobayashi T., Shiratake K. and Tabuchi T.
    • Journal Title

      The Horticulture Journal

      Volume: 87 Issue: 2 Pages: 214-221

    • DOI

      10.2503/hortj.OKD-070

    • NAID

      130006708511

    • ISSN
      2189-0102, 2189-0110
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Genome-wide study and omis study on fruit developmental physiology2018

    • Author(s)
      Shiratake K.
    • Journal Title

      Agri-Bioscience Monographs

      Volume: 印刷中

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] ゲノム編集による作物育種 ~現状・問題点・これから~2018

    • Author(s)
      白武勝裕
    • Organizer
      NPO法人東海地域生物系先端技術研究会 平成30年度第1回セミナー
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 園芸学研究は新しい生物学の流れをどう取り入れて発展して行くべきか2018

    • Author(s)
      白武勝裕
    • Organizer
      園芸学会平成30年度春季大会小集会「次世代の園芸研究を見据えた先端ゲノム研究(第5回)」
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] トマトMYB3R遺伝子の機能解析2017

    • Author(s)
      奥村瞳,伊藤正樹,太田垣駿吾,松本省吾,白武勝裕
    • Organizer
      平成29年度園芸学会秋季大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 果実の高糖度化に向けた分子基盤研究とその応用2017

    • Author(s)
      白武勝裕
    • Organizer
      平成29年度 常緑果樹研究会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] トマト果実成熟をエピジェネティックに制御する因子の探索と評価2017

    • Author(s)
      山田拓志,白武勝裕,松本省吾,太田垣駿吾
    • Organizer
      第14回 日本ナス科コンソーシアム年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 新しい作物の品種改良技術「ゲノム編集」とは?2017

    • Author(s)
      白武勝裕
    • Organizer
      第9回サイエンスカフェかごしま
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Genome-wide analysis of ATP Binding Cassette (ABC) proteins in tomato2017

    • Author(s)
      Ofori P.A., Mizuno A., Martinoia E., Reuscher S., Aoki K., Shibata D., Otagaki S., Matsumoto S. and Shiratake K.
    • Organizer
      平成29年度園芸学会秋季大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 果樹・果菜・花きの品質向上を目指した分子基盤研究2016

    • Author(s)
      白武勝裕
    • Organizer
      農学中手の会・第2回研究集会
    • Place of Presentation
      雄琴
    • Year and Date
      2016-11-10
    • Related Report
      2016 Research-status Report
  • [Presentation] ゲノム編集を利用した高糖度かつ糖組成を改変した果実の開発2016

    • Author(s)
      白武勝裕
    • Organizer
      日本食品科学工学会IUFoST-Japanシンポジウム「先端バイオテクノロジーを用いた農産物の機能開発」
    • Place of Presentation
      名城大学
    • Related Report
      2016 Research-status Report
    • Invited

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Published: 2016-04-21   Modified: 2023-01-30  

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