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Epigenetic dysregulation of noncoding RNAs in gastrointestinal cancer progression

Research Project

Project/Area Number 16K19352
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Gastroenterology
Research InstitutionSapporo Medical University

Principal Investigator

Niinuma Takeshi  札幌医科大学, 医学部, 助教 (60708113)

Research Collaborator Suzuki Hiromu  札幌医科大学, 分子生物学講座, 教授 (20381254)
Project Period (FY) 2016-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2017: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2016: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywordsnoncoding RNA / colon cancer / 大腸癌 / lncRNA / 大腸がん / 消化管がん / 転移 / エピジェネティクス / noncodingRNA
Outline of Final Research Achievements

First, we screened for noncoding RNAs which contribute to metastasis of gastrointestinal cancer from The Cancer Genome Atlas (TCGA) database. We selected COADREAD exon expression dataset, and found 21 lncRNA genes were upregulated in the group with lymph node metastasis compared to the group without metastasis. We assessed expression levels of these lncRNA genes in the series of colon cancer cell lines and normal colon tissues. In this analysis, DUXAP8 and DUXAP10 genes showed higher expression in cancer cells than normal tissues. Next, we examined DUXAP10 functions in colon cancer cells by knockdown using lentivirus vector. Depletion of DUXAP10 inhibited colon cancer cell growth and migration ability, thereby, DUXAP10 gene has oncogenic roles in colorectal cancer.

Report

(3 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • Research Products

    (9 results)

All 2018 2017 2016

All Journal Article (5 results) (of which Peer Reviewed: 5 results,  Open Access: 3 results) Presentation (4 results) (of which Int'l Joint Research: 2 results)

  • [Journal Article] Evaluation of Urinary DNA Methylation as a Marker for Recurrent Bladder Cancer: A 2-Center Prospective Study.2018

    • Author(s)
      Shindo T, Shimizu T, Nojima M, Niinuma T, Maruyama R, Kitajima H, Kai M, Itoh N, Suzuki H, Masumori N
    • Journal Title

      Urology.

      Volume: 113 Pages: 71-78

    • DOI

      10.1016/j.urology.2017.11.025

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Epigenetic silencing of SMOC1 in traditional serrated adenoma and colorectal cancer.2017

    • Author(s)
      Aoki H, Yamamoto E, Takasawa A, Niinuma T, Yamano HO, Harada T, Matsushita HO, Yoshikawa K, Takagi R, Harada E, Tanaka Y, Yoshida Y, Aoyama T, Eizuka M, Yorozu A, Kitajima H, Kai M, Sawada N, Sugai T, Nakase H, Suzuki H.
    • Journal Title

      Oncotarget.

      Volume: 9 Issue: 4 Pages: 4707-4721

    • DOI

      10.18632/oncotarget.23523

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Downregulation of miR-186 is associated with metastatic recurrence of gastrointestinal stromal tumors.2017

    • Author(s)
      Niinuma T, Kai M, Kitajima H, Yamamoto E, Harada T, Maruyama R, Nobuoka T, Kanda T, Hasegawa T, Tokino T, Sugai T, Shimomura Y, Nakase H, Suzuki H
    • Journal Title

      Oncology Letters

      Volume: 14 Pages: 5703-5710

    • DOI

      10.3892/ol.2017.6911

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Epigenetic silencing of diacylglycerol kinase gamma in colorectal cancer.2017

    • Author(s)
      Kai M, Yamamoto E, Sato A, Yamano HO, Niinuma T, Kitajima H, Harada T, Aoki H, Maruyama R, Toyota M, Hatahira T, Nakase H, Sugai T, Yamashita T, Toyota M, Suzuki H.
    • Journal Title

      Mol Carcinog

      Volume: - Issue: 7 Pages: 1743-1752

    • DOI

      10.1002/mc.22631

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Downregulation of miR-186 is associated with metastatic recurrence of gastrointestinal stromal tumors2017

    • Author(s)
      Takeshi Niinuma
    • Journal Title

      Oncolgy Letters

      Volume: in press

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Presentation] 消化管間質腫瘍においてエピジェネティックに制御される長鎖noncoding RNAの探索2017

    • Author(s)
      新沼 猛 北嶋 洋志 山本 英一郎 甲斐 正広 仲瀬裕志 時野隆至 今井浩三 鈴木 拓
    • Organizer
      第76回 日本癌学会学術総会
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 消化管間質腫瘍におけるエピジェネティック制御を受けるlncRNAの解析2017

    • Author(s)
      新沼 猛  北嶋 洋志  甲斐 正広  鈴木 拓
    • Organizer
      第11回 日本エピジェネティクス研究会
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 消化管間質腫瘍の再発に関連するmicroRNAの解析2016

    • Author(s)
      新沼 猛
    • Organizer
      第75回日本癌学会学術総会
    • Place of Presentation
      神奈川県横浜市 パシフィコ横浜
    • Year and Date
      2016-10-06
    • Related Report
      2016 Research-status Report
  • [Presentation] 消化管間質腫瘍の再発に関連するmicroRNAの解析2016

    • Author(s)
      新沼 猛
    • Organizer
      第10回日本エピジェネティクス研究会年会
    • Place of Presentation
      大阪府豊中市 千里ライフサイエンスセンター
    • Year and Date
      2016-05-19
    • Related Report
      2016 Research-status Report

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Published: 2016-04-21   Modified: 2019-03-29  

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