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Destruction of the biological clock system by environmental contaminants : Crosstalk between heme, NO, protein synthesis and clock genes

Research Project

Project/Area Number 17101002
Research Category

Grant-in-Aid for Scientific Research (S)

Allocation TypeSingle-year Grants
Research Field Risk sciences of radiation/Chemicals
Research InstitutionTohoku University

Principal Investigator

SHIMIZU Toru  Tohoku University, 多元物質科学研究所, 教授 (40118956)

Co-Investigator(Kenkyū-buntansha) KUROKAWA Hirofumi  東北大学, 多元物質科学研究所, 助手 (80359546)
TANAKA Atsunari  東北大学, 多元物質科学研究所, 教育研究支援者 (20431471)
IGARASHI Jotaro  東北大学, 多元物質科学研究所, 助教 (80375162)
Project Period (FY) 2005 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥111,150,000 (Direct Cost: ¥85,500,000、Indirect Cost: ¥25,650,000)
Fiscal Year 2009: ¥21,060,000 (Direct Cost: ¥16,200,000、Indirect Cost: ¥4,860,000)
Fiscal Year 2008: ¥21,060,000 (Direct Cost: ¥16,200,000、Indirect Cost: ¥4,860,000)
Fiscal Year 2007: ¥21,060,000 (Direct Cost: ¥16,200,000、Indirect Cost: ¥4,860,000)
Fiscal Year 2006: ¥21,060,000 (Direct Cost: ¥16,200,000、Indirect Cost: ¥4,860,000)
Fiscal Year 2005: ¥26,910,000 (Direct Cost: ¥20,700,000、Indirect Cost: ¥6,210,000)
KeywordsNO,ヘム / 環境汚染物質 / 時計遺伝子 / 蛋白合成 / NO / ヘム / ヘム鉄 / 転写因子 / 環境汚染 / シグナル伝達 / 水銀 / ヘム制御酵素・蛋白質 / ガスセンサー / 蛋白質合成 / 体内時計 / DNA結合 / 水銀イオン / NOガス / PASドメイン / 赤血球 / プロテインマイクロアレイ
Research Abstract

[1] Molecular mechanisms of NO- and heme-sensing of heme-regulated kinase (HRI) and heme-regulated transcriptional factors were elucidated and mercury was found to break the heme-protein interactions.; [2] Thiolate and α-lipoic acid remedied depressive behavior of mice induced by methyl-mercury.; [3] Gas-recognition sites and molecular mechanism of gas-induced catalytic enhancement of the heme-regulated gas-sensor enzymes were elucidated.

Report

(6 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • Research Products

    (93 results)

All 2010 2009 2008 2007 2006 2005 Other

All Journal Article (51 results) (of which Peer Reviewed: 38 results) Presentation (37 results) Book (1 results) Remarks (4 results)

  • [Journal Article] Thiolate with alpha-lipoic acid remediates depressive behavior of mice induced by methyl-mercury2010

    • Author(s)
      K. Kitanishi, J. Igarashi, T. Shimizu
    • Journal Title

      Current Topic in Toxicology (in press)

    • Related Report
      2009 Final Research Report
  • [Journal Article] Thiolate with α-lipoic acid remedies depressive behavior of mice2010

    • Author(s)
      清水透
    • Journal Title

      Current Topics in Toxicology (印刷中)

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The FG loop of a heme-based gas sensor enzyme, Ec DOS, functions in heme binding, autoxidation and catalysis2009

    • Author(s)
      S. Ito, J. Igarashi, T. Shimizu
    • Journal Title

      J.Inorg.Biochem. 103

      Pages: 1380-1385

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Role of Phe113 at the distal side of the heme domain of an oxygen-sensor (Ec DOS) in the characterization of the heme environment2009

    • Author(s)
      S. Ito, Y. Araki, A. Tanaka, J. Igarashi, T. Wada, T. Shimizu
    • Journal Title

      J.Inorg.Biochem. 103

      Pages: 989-996

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] The FG loop of a heme-based gas sensor enzyme, Ec DOS, functions2009

    • Author(s)
      清水透
    • Journal Title

      J.Inorg.Biochem. 103

      Pages: 1380-1385

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Role of Phe113 at the distal side of heme domain of an oxygen-sensor2009

    • Author(s)
      清水透
    • Journal Title

      J.Inorg.Biochem 103

      Pages: 989-996

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article]2009

    • Author(s)
      清水透(分担執筆)
    • Journal Title

      P450の分子生物学 第2版(講談社)

      Pages: 77-83

    • Related Report
      2009 Annual Research Report
  • [Journal Article] Ligand binding to the Fe(III)-protoporphyrin IX complex of phosphodiesterase from Escherichia coli (Ec DOS) markedly enhances catalysis of cyclic di-GMP : Roles of Met95, Arg97, and Phe113 of the putative heme distal side in catalytic regulation and ligand binding2008

    • Author(s)
      A. Tanaka, T. Shimizu
    • Journal Title

      Biochemistry 47

      Pages: 13438-13446

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Arg97 at the heme distal side of the isolated heme-bound PAS domain of a heme-based oxygen sensor from Escherichia coli (Ec DOS) plays critical roles in auto-oxidation and binding to gases, particularly O_22008

    • Author(s)
      Y. Ishitsuka, Y. Araki, A. Tanaka, J. Igarashi, O. Ito, T. Shimizu
    • Journal Title

      Biochemistry 47

      Pages: 8874-8884

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Resonance Raman investigation of redox-induced structural changes of protein and heme in the sensor domain of Ec DOS protein2008

    • Author(s)
      S. F. El-Mashtoly, H. Takahashi, H. Kurokawa, A. Sato, T. Shimizu, T. Kitagawa
    • Journal Title

      J.Raman Spectrosc. 39

      Pages: 1614-1626

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Elucidation of the heme-binding site of heme-regulated eIF2alpha kinase (HRI) and the role of the regulatory motif in heme sensing by spectroscopic and catalytic studies of mutant proteins2008

    • Author(s)
      J. Igarashi, M. Murase, A. Iizuka, F. Pichierri, M. Martinkova, T. Shimizu
    • Journal Title

      J.Biol.Chem. 283

      Pages: 18782-18791

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Roles of Arg97 and Phe113 in regulation of distal ligand binding to heme in the sensor domain of Ec DOS protein : resonance Raman and mutation study2008

    • Author(s)
      S. F. El-Mashtoly, S. Nakashima, A. Tanaka, T. Shimizu, T. Kitagawa
    • Journal Title

      J.Biol.Chem. 283

      Pages: 19200-19010

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Heme binding characteristics of the isolated PAS-A domain of mouse Per2, a transcriptional regulatory factor associated with circadian rhythms2008

    • Author(s)
      K. Kitanishi, J. Igarashi, K. Hayasaka, N. Hikage, I. Saiful, S. Yamauchi, T. Uchida, K. Ishimori, T. Shimizu
    • Journal Title

      Biochemistry 47

      Pages: 6157-6168

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] The roles of thiolate-heme proteins, other than the P450 cytochromes, in the regulation of heme-sensor proteins2008

    • Author(s)
      J. Igarashi, K. Kitanishi, M. Martinkova, M. Murase, A. Iizuka, T. Shimizu
    • Journal Title

      Acta Chim.Slov. 55

      Pages: 67-74

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Reactive complexes in myoglobin and nitric oxide synthase2008

    • Author(s)
      清水透
    • Journal Title

      Inorg. Chim. Acta 361

      Pages: 831-843

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The roles of thiolate-heme proteins, other than the P450 cytochromes, in the regulation of heme-sensor proteins2008

    • Author(s)
      清水透
    • Journal Title

      Acta Chim. Slov 55

      Pages: 67-74

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Heme binding characteristics of the isolated PAS-A domain of mouse Per2, a transcriptional regulatory factor associated with2008

    • Author(s)
      清水透
    • Journal Title

      Biochemistry 47

      Pages: 6157-6168

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Roles of Arg97 and Phel13 in regulation of distal ligand binding to heme in the sensor domain of Ec DOS protein2008

    • Author(s)
      清水透
    • Journal Title

      J. Biol. Chem 283

      Pages: 19200-19210

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Elucidation of the heme-binding site of heme-regulated eIF2 a kinase (HRII and the role of the regulatory motif in heme2008

    • Author(s)
      清水透
    • Journal Title

      J. Biol. Chem 283

      Pages: 18782-18791

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Resonance Raman investigation of redox-induced structural changes of protein and heme in the sensor domain of Ec DOS2008

    • Author(s)
      清水透
    • Journal Title

      J. Raman Spectrosc. 39

      Pages: 1614-1626

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Thermodynamic analysis of l-arginine and Nω-hydroxy-1-arginine binding to nitric oxide synthase2008

    • Author(s)
      清水透
    • Journal Title

      Biochim. Biophys. Acta 1745

      Pages: 806-810

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Arg97 at the heme distal side of the isolated heme-bound PAS domain of a heme-based oxygen sensor from Escherichia coli2008

    • Author(s)
      清水透
    • Journal Title

      Biochemistry 47

      Pages: 8874-8884

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ligand binding to the Fe(III)-protoporphyrin IX complex of pho snhodiesterase from Escherichia coli (Ec DOS) markedly2008

    • Author(s)
      清水透
    • Journal Title

      Biochemistry 47

      Pages: 13438-13446

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The roles of thiolate-heme proteins, other than the P450 enzyme,…….2008

    • Author(s)
      五十嵐城太郎, 他
    • Journal Title

      Acta Chimica Slovenica 282

      Pages: 21301-21307

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reactive complexes in myoglobin and nitric oxide synthase2008

    • Author(s)
      ヘルスレス, 他
    • Journal Title

      Inorganic Chimica Acta 361

      Pages: 831-843

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Eukaryotic initiation factor 2alpha kinase is a nitric oxide-responsive mercury sensor enzyme : Potent inhibition of catalysis by the mercury cation and reversal by nitric oxide2007

    • Author(s)
      M. Martinkova, J. Igarashi, T. Shimizu
    • Journal Title

      FEBS Lett. 581

      Pages: 4109-4114

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Ultraviolet resonance Raman evidence for utilization of the heme 6-propionate hydrogen-bond network in signal transmission from heme to protein in EcDOS protein2007

    • Author(s)
      S. F. El-Mashtoly, H. Takahashi, T. Shimizu, T. Kitagawa
    • Journal Title

      J.Am.Chem.Soc. 129

      Pages: 3556-3563

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Critical role of the heme axial ligand, Met95, in locking catalysis of the phosphodiesterase from Escherichia coli (Ec DOS) toward cyclic diGMP2007

    • Author(s)
      A. Tanaka, H. Takahashi, T. Shimizu
    • Journal Title

      J.Biol.Chem. 282

      Pages: 21301-21307

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Eukaryotic initiation factor 2alpha kinase is a nitric oxide-responsive…2007

    • Author(s)
      マルティンコーヴァ, 他
    • Journal Title

      FEBS Journal 581

      Pages: 4109-4114

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ultraviolet resonance Raman evidence for utilization of the heme…2007

    • Author(s)
      エルマシトリー, 他
    • Journal Title

      Journal of American Chemical Society 129

      Pages: 3556-3563

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Critical role of the heme axial ligand, Met95, in locking catalysis……2007

    • Author(s)
      田中敦成, 他
    • Journal Title

      Journal of Biological Chemistry 282

      Pages: 21301-21307

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification of Cys385 in the isolated kinase insertion domain……2007

    • Author(s)
      平井響子, 他
    • Journal Title

      Journal of Inorganic Biochemistry 101

      Pages: 1172-1179

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ultraviolet Resonance Raman Evidence for Utilization of the Heme 6-Propionate Hydrogen-Bond Network of the Ec DOS Protein2007

    • Author(s)
      清水 透, 他
    • Journal Title

      Journal of American Chemical Society 129・12

      Pages: 3556-3563

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Phosphodiesterase activity of EcDOS, a heme-regulated enzyme from Escherichia coli, toward 3', 5'-cyclic diguanylic acid is obviously enhanced by O_2 and CO binding2006

    • Author(s)
      H. Takahashi, T. Shimizu
    • Journal Title

      Chem.Lett. 35

      Pages: 970-971

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Characterization of heme-regulated eIF2 alpha kinase : Roles of the N-terminal domain in the oligomeric state, heme binding, catalysis, and inhibition2006

    • Author(s)
      M. Miksanova, J. Igarashi, M. Minami, I. Sagami, S. Yamauchi, H. Kurokawa, T. Shimizu
    • Journal Title

      Biochemistry 45

      Pages: 9894-9905

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Spectroscopic and DNA-binding characterization of the isolated heme-bound basic helix-loop-helix-PAS-A domain of neuronal PAS protein 2 (NPAS2), a transcription activator protein associated with circadian rhythms2006

    • Author(s)
      Y. Mukaiyama, T. Uchida, E. Sato, A. Sasaki, Y. Sato, J. Igarashi, H. Kurokawa, I. Sagami, T. Kitagawa, T. Shimizu
    • Journal Title

      FEBS J. 273

      Pages: 2528-2539

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Critical roles of Leu99 and Leu115 at the heme distal side in auto-oxidation and the redox potential of a heme-regulated phosphodiesterase from Escherichia coli2006

    • Author(s)
      N. Yokota, Y. Araki, H. Kurokawa, O. Ito, J. Igarashi, T. Shimizu
    • Journal Title

      FEBS J. 273

      Pages: 1210-1223

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Structure-function relationships of EcDOS, a heme-regulated phosphodiesterase from Escherichia coli2006

    • Author(s)
      Y. Sasakura, T. Yoshimura-Suzuki, H. Kurokawa, T. Shimizu
    • Journal Title

      Acc.Chem.Res. 39

      Pages: 37-43

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Structure-Function Relationships of EcDOS, a Heme-Regulated Phosphodiesterase from Escherichia coli2006

    • Author(s)
      清水 透, 他
    • Journal Title

      Account of Chemical Research 39・1

      Pages: 37-43

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Critical roles of Leu99 and Leu115 at the heme distal side in auto-oxidation and the redox potential of Ec DOS2006

    • Author(s)
      清水 透, 他
    • Journal Title

      FEBS Journal 273・5

      Pages: 1210-1223

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Spectroscopic and DNA-binding characterization of the isolated heme-bound bHLH-PAS-A domain of NPAS22006

    • Author(s)
      清水 透, 他
    • Journal Title

      FEBS Journal 273・11

      Pages: 2528-2539

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Phosphodiesterase Activity of Ec DOS toward 3, 5-Cyclic di-GMP Is Obviously Enhanced by 02 and CO Binding2006

    • Author(s)
      清水 透, 他
    • Journal Title

      Chemistry Letters 35・8

      Pages: 970-971

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Characterization of Heme-Regualted eIF2α Kinase : Roles of the N-Terminal Domain in the Oligomerin State, and Catalvsis.2006

    • Author(s)
      清水 透, 他
    • Journal Title

      Biochemistry 45・32

      Pages: 9849-9905

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Investigation of the relationship between protein-protein interaction and catalytic activity of a heme-regulated phosphodiesterase from Escherichia coli (EcDOS) by protein microarray2005

    • Author(s)
      Y. Sasakura, K. Kanda, T. Yoshimura-Suzuki, T. Matsui, S. Fukuzono, T. Shimizu
    • Journal Title

      Biochemistry 44

      Pages: 9598-9605

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Spectroscopic characterization of the isolated heme-bound PAS-B domain of neuronal PAS domain protein 2 associated with circadian rhythms2005

    • Author(s)
      R. Koudo, H. Kurokawa, E. Sato, J. Igarashi, T. Uchida, I. Sagami, T. Kitagawa, T. Shimizu
    • Journal Title

      FEBS J. 272

      Pages: 4153-4162

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] CO-dependent activity-controlling mechanism of heme-containing CO-sensor protein, neuronal PAS domain protein 22005

    • Author(s)
      T. Uchida, E. Sato, A. Sato, I. Sagami, T. Shimizu, T. Kitagawa
    • Journal Title

      J.Biol.Chem. 280

      Pages: 21358-21368

    • Related Report
      2009 Final Research Report
    • Peer Reviewed
  • [Journal Article] Investigation of the Relationship between Protein-Protein Interaction and Catalytic Activity of a Heme-Regulated Phosphodiesterase2005

    • Author(s)
      清水 透 他
    • Journal Title

      Biochemistry 44・28

      Pages: 9598-9605

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Dual Effects of the Substrate and Pterins on the Kinetics of CO Binding to Neuronal Nitric Oxide Synthase : A Laser Flash Photolysis2005

    • Author(s)
      清水 透 他
    • Journal Title

      Chemistry Letters 34・6

      Pages: 752-753

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Spectroscopic Characterization of the Isolated Heme-bound PAS-B Domain of Neuronal PAS Domain 2 Associated with Circadiam Rhythms2005

    • Author(s)
      清水 透 他
    • Journal Title

      FEBS Journal 272・16

      Pages: 4153-4162

    • Related Report
      2005 Annual Research Report
  • [Journal Article] DOSEc, a Heme-Regulated Phosphodiesterase, Plays an Important Role in Regulation of the Cyclic AMP Level in Escherichia coli2005

    • Author(s)
      清水 透 他
    • Journal Title

      Journal of Bacteriology 187・19

      Pages: 6678-6682

    • Related Report
      2005 Annual Research Report
  • [Journal Article] CO-dependent Activity-controlling Mechanism of Heme-containing CO-sensor Protein, Neuronal PAS Domain Protein 22005

    • Author(s)
      清水 透 他
    • Journal Title

      Journal of Biological Chemistry 280・22

      Pages: 21358-21368

    • Related Report
      2005 Annual Research Report
  • [Presentation] Cysteine Thiolate is the Heme Binding Site of Heme-regulated Transcription Regulatory Factors Associated with Circadian Rhythms2010

    • Author(s)
      Kenichi Kitanishi, Jotaro Igarashi, Toru Shimizu
    • Organizer
      Gordon Research Conference on Protein Cofactors, Radicals and Quinones
    • Place of Presentation
      U.S.A., Ventura, CA
    • Related Report
      2009 Final Research Report
  • [Presentation] Heme-regulated Eukaryotic Initiation Factor 2α Kinase2010

    • Author(s)
      Jotaro Igarashi, Toru Shimizu
    • Organizer
      Gordon Research Conference on Protein Cofactors, Radicals and Quinones
    • Place of Presentation
      U.S.A., Ventura, CA
    • Related Report
      2009 Final Research Report
  • [Presentation] Mechanisms of gas-sensing and intra-molecular signal transduction2009

    • Author(s)
      清水透
    • Organizer
      Symposium Adv.Biol.Inorg.Chem.
    • Place of Presentation
      インド、ムンバイ
    • Year and Date
      2009-11-06
    • Related Report
      2009 Annual Research Report
  • [Presentation] Heme-sensing mechanisms of heme-sensor proteins2009

    • Author(s)
      清水透
    • Organizer
      14th Int.Conf.Biol.Inorg.Chem.
    • Place of Presentation
      愛知県・名古屋市
    • Year and Date
      2009-07-29
    • Related Report
      2009 Annual Research Report
  • [Presentation] The critical role of the thiolate-heme complex in the functioning2009

    • Author(s)
      清水透
    • Organizer
      16th Int.Conf.Cyt.P450, Biochem.Biophys.
    • Place of Presentation
      沖縄、名護市
    • Year and Date
      2009-06-24
    • Related Report
      2009 Annual Research Report
  • [Presentation] Emerging roles of heme as the signal and the gas-sensing site2009

    • Author(s)
      清水透
    • Organizer
      Biochemistry Seminar, Jagiellonian Univ.
    • Place of Presentation
      ポーランド、クラコフ
    • Year and Date
      2009-06-13
    • Related Report
      2009 Annual Research Report
  • [Presentation] Cysteine thiolate is the heme sensing site in heme-sensor proteins2009

    • Author(s)
      清水透
    • Organizer
      XXII Int.Conf.Coord.Bioinorg.Chem.
    • Place of Presentation
      スロバキア、スモレニス
    • Year and Date
      2009-06-10
    • Related Report
      2009 Annual Research Report
  • [Presentation] Mechanisms of Gas-sensing and Intra-molecular Signal Transduction of a Heme-based Oxygen-sensor Enzyme, Ec DOS2009

    • Author(s)
      Atsunari Tanaka, Yukako Ishitsuka, Jotaro Igarashi, Toru Shimizu
    • Organizer
      Symposium on Avanced Biological Inorganic Chemistry (SABIC-2009)
    • Place of Presentation
      India, Mumbai
    • Related Report
      2009 Final Research Report
  • [Presentation] Heme-sensing Mechanisms of Heme-sensor Proteins Associated with Protein Synthesis and Circadian Rhythms2009

    • Author(s)
      Jotaro Igarashi, Motohiko Murase, Marketa Martinkova, Kenichi Kitanishi, Toru Shimizu
    • Organizer
      14th International Conference on Biological Inorganic Chemistry
    • Place of Presentation
      Japan, Nagoya
    • Related Report
      2009 Final Research Report
  • [Presentation] The Critical Role of the Thiolate-Heme Complex in the Functioning2009

    • Author(s)
      Jotaro Igarashi, Kenichi Kitanishi, Motohiko Murase, Marketa Martinkova, Toru Shimizu
    • Organizer
      16th International Conference on Cytochrome P450, Biochemistry, Biophysics, Biotechnology
    • Place of Presentation
      Japan, Nago, Okinawa
    • Related Report
      2009 Final Research Report
  • [Presentation] Emerging Roles of Heme as the Signal and the Gas-sensing Site : Heme-sensor and Gas-sensor Proteins2009

    • Author(s)
      Toru Shimizu
    • Organizer
      Biochemistry Seminar, Department of Medical Biotechnology
    • Place of Presentation
      Jagielloninan University, Poland, Krakow
    • Related Report
      2009 Final Research Report
  • [Presentation] Cysteine thiolate is the heme sensing site in heme-sensor proteins2009

    • Author(s)
      Jotaro Igarashi, Kenichi Kitanishi, Toru Shimizu
    • Organizer
      XXII International Conference on Coordination and Bioinorganic Chemistry
    • Place of Presentation
      Slovakia, Smolenice
    • Related Report
      2009 Final Research Report
  • [Presentation] Heme-sensing Mechanism of Heme-sensor Proteins Associated with Circadian Rhythms and Protein Synthesis2008

    • Author(s)
      Toru Shimizu
    • Organizer
      Biochemistry Meeting at the Department of Morphological-Biomedical Science
    • Place of Presentation
      University of Verona, Italy, Verona
    • Year and Date
      2008-10-03
    • Related Report
      2009 Final Research Report
  • [Presentation] Molecular mechanism of NO-induced activation of a heme-sensor, eIF2a kinase (Invited)2008

    • Author(s)
      清水透
    • Organizer
      First National Congress for Biological Aspect of Nitric Oxide
    • Place of Presentation
      イタリア、リミニ
    • Year and Date
      2008-10-03
    • Related Report
      2008 Annual Research Report
  • [Presentation] Heme-binding proteins associated with transcription of circadian rhythms (Invited)2008

    • Author(s)
      清水透
    • Organizer
      Gordon Research Conference on the Chemistry & Biology of Tetrapyrroles
    • Place of Presentation
      アメリカ合衆国、ニューポート
    • Year and Date
      2008-07-24
    • Related Report
      2008 Annual Research Report
  • [Presentation] Molecular machanism of NO-induced activation of a heme-sensor, eIF2α kinase2008

    • Author(s)
      Toru Shimizu
    • Organizer
      Convegno Nazionale, Gli Aspetti Biologici dell'Ossido Nitrico (Italia National Congress for Biological Aspect of Nitric Oxide)
    • Place of Presentation
      Italia, Rimini
    • Related Report
      2009 Final Research Report
  • [Presentation] NO-induced activation of a heme-sensor, eIF2α kinase, in association with binding to cysteine and heme2008

    • Author(s)
      Jotaro Igarashi, Motohiko Murase, Jun Iwashita, Takehiko Sasaki, Toru Shimizu
    • Organizer
      Fifth International Conference, Biology, Chemistry, and Therapeutic Applications of Nitric Oxide
    • Place of Presentation
      Austria, Bregenz
    • Related Report
      2009 Final Research Report
  • [Presentation] Heme-binding proteins associated with transcription of circadian rhythms2008

    • Author(s)
      Toru Shimizu
    • Organizer
      Gordon Research Conference on the Chemistry & Biology of Tetrapyrroles
    • Place of Presentation
      U.S.A., Newport, RI
    • Related Report
      2009 Final Research Report
  • [Presentation] Site-directed mutagenesis study to identify the heme binding site…2007

    • Author(s)
      村瀬元彦, 他
    • Organizer
      第45回日本生物物理学会
    • Place of Presentation
      横浜市
    • Year and Date
      2007-12-21
    • Related Report
      2007 Annual Research Report
  • [Presentation] Characterization of Cry, an FAD-binding protein associated with…2007

    • Author(s)
      石川静, 他
    • Organizer
      第80回日本生化学会大会
    • Place of Presentation
      横浜市
    • Year and Date
      2007-12-11
    • Related Report
      2007 Annual Research Report
  • [Presentation] CPモチーフとヘムとの相互作用:ヘム制御蛋白質のヘム結合部位の解析2007

    • Author(s)
      飯塚彩, 他
    • Organizer
      第57回錯体化学討論会
    • Place of Presentation
      名古屋市
    • Year and Date
      2007-09-25
    • Related Report
      2007 Annual Research Report
  • [Presentation] UV resonance Raman investigation of the functional mechanism…2007

    • Author(s)
      北川禎三, 他
    • Organizer
      13th International Conference on Biological Inorganic Chemistry
    • Place of Presentation
      Vienna, Austria
    • Year and Date
      2007-07-15
    • Related Report
      2007 Annual Research Report
  • [Presentation] Identification of a heme axial ligand of heme-regulated eukaryotic….2007

    • Author(s)
      五十嵐城太郎, 他
    • Organizer
      13th International Conference on Biological Inorganic Chemistry
    • Place of Presentation
      Vienna, Austria
    • Year and Date
      2007-07-15
    • Related Report
      2007 Annual Research Report
  • [Presentation] Structure-function relationships of a thiol-coordinating heme protein,……2007

    • Author(s)
      マルチンコーヴァ, 他
    • Organizer
      15th International Conference on Cytochrome P450, Biochemistry, Biophysics, Functional Genomics
    • Place of Presentation
      Bled, Slovenia
    • Year and Date
      2007-06-17
    • Related Report
      2007 Annual Research Report
  • [Presentation] Characterization of the thiol-coordinated heme protein, NPAS2, and2007

    • Author(s)
      北西健一, 他
    • Organizer
      15th International Conference on Cytochrome P450, Biochemistry, Biophysics, Functional Genomics
    • Place of Presentation
      Bled, Slovenia
    • Year and Date
      2007-06-17
    • Related Report
      2007 Annual Research Report
  • [Presentation] Cloning, overexpression and charecterization of Cry, an FAD-binding…2007

    • Author(s)
      石川静, 他
    • Organizer
      15th International Conference on Cytochrome P450, Biochemistry, Biophysics, Functional Genomics
    • Place of Presentation
      Bled, Slovenia
    • Year and Date
      2007-06-17
    • Related Report
      2007 Annual Research Report
  • [Presentation] Identification of the heme binding site of the heme-regulated……2007

    • Author(s)
      飯塚彩, 他
    • Organizer
      15th International Conference on Cytochrome P450, Biochemistry, Biophysics, Functional Genomics
    • Place of Presentation
      Bled, Slovenia
    • Year and Date
      2007-06-17
    • Related Report
      2007 Annual Research Report
  • [Presentation] Relationship between heme binding and catalysis of a heme-regulated……2007

    • Author(s)
      村瀬元彦, 他
    • Organizer
      15th International Conference on Cytochrome P450, Biochemistry, Biophysics, Functional Genomics
    • Place of Presentation
      Bled, Slovenia
    • Year and Date
      2007-06-17
    • Related Report
      2007 Annual Research Report
  • [Presentation] Spectroscopic studied of thiol-coordinated Forms of a heme-regulated…2007

    • Author(s)
      石塚由佳子, 他
    • Organizer
      15th International Conference on Cytochrome P450, Biochemistry, Biophysics, Functional Genomics
    • Place of Presentation
      Bled, Slovenia
    • Year and Date
      2007-06-17
    • Related Report
      2007 Annual Research Report
  • [Presentation] Structure-function relationships of eIF2α kinase, HRI, associated with…2007

    • Author(s)
      清水透
    • Organizer
      VIII National Congress of Pharmacology, Therapeutic and Clinical Toxicoloty
    • Place of Presentation
      Tirgu-Mure, Romania
    • Year and Date
      2007-06-06
    • Related Report
      2007 Annual Research Report
  • [Presentation] ガスにより機能が制御されるへムセンサー酵素2007

    • Author(s)
      田中敦成, 他
    • Organizer
      第7回日本蛋白質科学会年会
    • Place of Presentation
      仙台市
    • Year and Date
      2007-05-24
    • Related Report
      2007 Annual Research Report
  • [Presentation] 神経型NO合成酵素に対するアイソザイム選択的阻害剤の構造基盤2007

    • Author(s)
      五十嵐城太郎, 他
    • Organizer
      第7回日本NO学会学術集会
    • Place of Presentation
      大津市
    • Year and Date
      2007-05-17
    • Related Report
      2007 Annual Research Report
  • [Presentation] サーカディン・リズムに関係する転写因子PER2のクローニング、大量発現2007

    • Author(s)
      北西健一, 他
    • Organizer
      日本化学会第87回春季年会
    • Place of Presentation
      吹田市
    • Year and Date
      2007-03-25
    • Related Report
      2007 Annual Research Report
  • [Presentation] Structure-function relationships of a thiol-coordinating heme protein, HRI, associated with protein synthesis2007

    • Author(s)
      Marketa Martinkova, Jotaro Igarashi, Toru Shimizu
    • Organizer
      15th International Conference on Cytochrome P450, Biochemistry, Biophysics, Functional Genomics
    • Place of Presentation
      Slovenia, Bled
    • Related Report
      2009 Final Research Report
  • [Presentation] Structure-function relationships of eIF2α kinase (heme-regulated inhibitor, HRI), associated with protein synthesis2007

    • Author(s)
      Toru Shimizu
    • Organizer
      VIIIth National Congress of Pharmacology, Therapeutics and Clinical Toxicology
    • Place of Presentation
      Romania, Tirgu-Mure
    • Related Report
      2009 Final Research Report
  • [Presentation] Intramolecular Signal Transduction and Signal Switching of Heme-sensor Proteins through NO and CO Binding2006

    • Author(s)
      Toru Shimizu
    • Organizer
      20th International Congress of Biochemistry and Molecular Biology and 11th FAOBMB
    • Place of Presentation
      Japan, Kyoto
    • Related Report
      2009 Final Research Report
  • [Presentation] Role of the N-terminal Domain in the Structure and Catalysis of Heme-regualted Eukaryotic Initiation Factor 2α Kinase, a Heme-sensor Enzyme2006

    • Author(s)
      Marketa Miksanova, Hirofumi Kurokawa, Jotaro Igarashi, Toru Shimizu
    • Organizer
      Biochemistry and Molecular Biology of Sensor Enzymes and Proteins : Satellite Meeting of the 20th IUBMB International Congress of Biochemistry and Molecular Biology
    • Place of Presentation
      Japan, Sendai
    • Related Report
      2009 Final Research Report
  • [Book] 他のヘムーチオレートタンパク質の構造と機能2009

    • Author(s)
      五十嵐城太郎, 清水透 (分担執筆)
    • Related Report
      2009 Final Research Report
  • [Remarks] ホームページ等

    • URL

      http://www.tagen.tohoku.ac.jp/labo/shimizu/

    • Related Report
      2009 Final Research Report
  • [Remarks]

    • URL

      http://www.tagen.tohoku.ac.jp/labo/shimizu/

    • Related Report
      2009 Annual Research Report
  • [Remarks]

    • URL

      http://www.tagen.tohoku.ac.jp/labo/shimizu/

    • Related Report
      2008 Annual Research Report
  • [Remarks]

    • URL

      http://www.tagen.tohoku.ac.jp/labo/shimizu/

    • Related Report
      2007 Annual Research Report

URL: 

Published: 2005-04-01   Modified: 2016-04-21  

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