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Structural basis for the progression of clathrin assembly in clathrin-mediated endocytosis

Research Project

Project/Area Number 17K07309
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Structural biochemistry
Research InstitutionKyushu University

Principal Investigator

Shimada Atsushi  九州大学, 生体防御医学研究所, 准教授 (70391977)

Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2019: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2018: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2017: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords蛋白質 / X線結晶構造解析 / 等温滴定熱測定 / エンドサイトーシス / 蛋白質間相互作用 / 電子顕微鏡 / X線結晶解析 / タンパク質間相互作用
Outline of Final Research Achievements

Clathrin-mediated endocytosis is a mechanism by which eukaryotic cells take up extracellular molecules into the cell. Clathrin-mediated endocytosis is initiated by a process called clathrin assembly, where a pivotal protein, clathrin, assembles into the clathrin lattice on the cell membrane. Among the proteins responsible for clathrin assembly, some proteins localize to the central part of the lattice and others localize to the periphery of the lattice, thereby forming a complex network to promote clathrin assembly. In this study, we used structural biological and biochemical techniques and elucidated the structural basis for the interactions of the key molecules of clathrin assembly, such as Eps15 and the AP-2 complex. Based on these results, we constructed a novel mechanistic model of clathrin assembly.

Academic Significance and Societal Importance of the Research Achievements

本研究ではクラスリン依存性エンドサイトーシスのクラスリン重合ステップに関与するタンパク質について、その相互作用の構造的基盤を解明し、新たなクラスリン重合モデルを構築した。この成果は真核生物における普遍的な生命現象であるクラスリン依存性エンドサイトーシス進行機構の理解を深めるだけでなく、近年注目を集める、クラスリン依存性エンドサイトーシスをターゲットにした創薬の基礎にもなる成果である。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (14 results)

All 2020 2019 2018 2017 Other

All Int'l Joint Research (2 results) Journal Article (2 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 2 results,  Open Access: 1 results) Presentation (6 results) (of which Invited: 1 results) Remarks (4 results)

  • [Int'l Joint Research] FMP Berlin(ドイツ)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] FMP Berlin(ドイツ)

    • Related Report
      2018 Research-status Report
  • [Journal Article] Crystal contact-free conformation of an intrinsically flexible loop in protein crystal: Tim21 as the case study2020

    • Author(s)
      Bala Siqin、Shinya Shoko、Srivastava Arpita、Ishikawa Marie、Shimada Atsushi、Kobayashi Naohiro、Kojima Chojiro、Tama Florence、Miyashita Osamu、Kohda Daisuke
    • Journal Title

      Biochimica et Biophysica Acta (BBA) - General Subjects

      Volume: 1864 Issue: 2 Pages: 129418-129418

    • DOI

      10.1016/j.bbagen.2019.129418

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Phagocytosis is mediated by two-dimensional assemblies of the F-BAR protein GAS72019

    • Author(s)
      Hanawa-Suetsugu Kyoko et al.
    • Journal Title

      Nature Communications

      Volume: 10 Issue: 1 Pages: 4763-4763

    • DOI

      10.1038/s41467-019-12738-w

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] DGKα活性制御の分子基盤: N末端RVH領域へのCa2+結合の物理化学的解析2019

    • Author(s)
      高橋大輔,嶋田睦,Jose Caarveiro,阿部義人,植田正, 坂根郁夫
    • Organizer
      2019年度日本生化学会九州支部例会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Crystal contact-free conformation of an intrinsically flexible loop in protein crystal: Tim21 as the case study2019

    • Author(s)
      Siqin Bala, Shoko Shinya, Arpita Srivastava, Marie Ishikawa, Atsushi Shimada, Naohiro Kobayashi, Chojiro Kojima, Florence Tama, Osamu Miyashita, Daisuke Kohda
    • Organizer
      第42回日本分子生物学会年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Visualization of the spatial distribution of a presequence peptide in the binding site of the mitochondrial presequence receptor, Tom20, using crystal contact-free space created in protein crystals2018

    • Author(s)
      韓喜玲、嶋田睦、神田大輔
    • Organizer
      平成30年度日本生化学会九州支部例会
    • Related Report
      2018 Research-status Report
  • [Presentation] Creating crystal contact-free space in protein crystals makes the spatial distribution of a presequence peptide in the binding site of the mitochondrial presequence receptor, Tom20, visible2018

    • Author(s)
      韓喜玲、嶋田睦、神田大輔
    • Organizer
      第91回日本生化学会大会
    • Related Report
      2018 Research-status Report
  • [Presentation] クラスリン依存性エンドサイトーシスにおけるクラスリン重合調節機構の構造的基盤2018

    • Author(s)
      山口淳子、嶋田睦
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] エンドサイトーシス 関連細胞質タンパク質の構造から迫るクラスリン重合機構 (Insights into clathrin assembly from the structures of cytosolic endocytic proteins)2017

    • Author(s)
      嶋田睦
    • Organizer
      第55回日本生物物理学会年会
    • Related Report
      2017 Research-status Report
    • Invited
  • [Remarks] 九州大学-研究者情報 [嶋田 睦]

    • URL

      https://hyoka.ofc.kyushu-u.ac.jp/search/details/K004442/index.html

    • Related Report
      2019 Annual Research Report
  • [Remarks] 研究者プロファイリングツール 九州大学Pure [嶋田 睦]

    • URL

      https://kyushu-u.pure.elsevier.com/ja/persons/atsushi-shimada-2

    • Related Report
      2019 Annual Research Report
  • [Remarks] 生体防御医学研究所構造生物学分野ホームページ

    • URL

      http://vsb.bmr.kyushu-u.ac.jp/VSB/index.html

    • Related Report
      2019 Annual Research Report
  • [Remarks] researchmap [嶋田 睦]

    • URL

      https://researchmap.jp/read0117872/

    • Related Report
      2019 Annual Research Report

URL: 

Published: 2017-04-28   Modified: 2021-02-19  

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