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Integrated omics analysis for non-alcoholic fatty liver disease using multiple genome cohorts

Research Project

Project/Area Number 17K09864
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Metabolomics
Research InstitutionJichi Medical University

Principal Investigator

Iwamoto Sadahiko  自治医科大学, 医学部, 教授 (10232711)

Co-Investigator(Kenkyū-buntansha) 渡邉 和寿  自治医科大学, 医学部, 講師 (60724416)
宮下 洋  自治医科大学, 医学部, 教授 (90301449)
Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2019: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2018: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2017: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords非アルコール性脂肪肝 / ゲノムワイド関連解析 / 腸内細菌叢 / マウスモデル / メタボリック症候群 / ゲノムコホート / メタゲノム
Outline of Final Research Achievements

Non-alcoholic fatty liver disease (NAFLD) is supposed to manifest its metabolic phenotype in the liver, but it is common to have lean individuals who are diagnosed with NAFLD. metabolically healthy normal-weight NAFLD patients (n=275) were compared with non-NAFLD controls (n=1,411) adjusted for age, sex, and alcohol consumption by a genome-wide association study (GWAS). HLA in chr6, MIR548F3 in chr7, MYL2 in chr12 and GPC6 in chr13 were suggested by the GWAS, which were further assessed by SNP association analysis of whole NAFLD against non-NAFLD in 9,726 members of the general population. The lead SNP in chr6 was significantly replicated with increased NAFLD risk. Imputation based and next generation sequence-based typing of HLA showed the significant increase of the HLA-B*54:01 allele. Fecal metagenomic analysis of 3,420 members of the general population showed significant dissimilarity in beta-diversity analysis of HLA-B*54:01 allele carriers.

Academic Significance and Societal Importance of the Research Achievements

糖尿病や肥満などを合併しない脂肪肝の遺伝的背景を調べることによって、新たな関連する遺伝子座、HLAを発見した。どのようにHLAが脂肪肝の易罹患性に関わるかについて、脂肪肝との深い関連が観察されている腸内細菌叢を調べた結果、脂肪肝のリスクを高めるHLAタイプを持つ人は脂肪肝を発症しやすい特徴を持つことが明らかになった。メタボリック症候群の増加に伴って脂肪肝の有病率も高まっており、病状が進行すれば肝硬変から肝癌の原因にもなる脂肪肝炎は将来、ウイルス性肝炎を凌駕する肝疾患となることが危惧されている。今回の発見によって、脂肪肝の予防や治療に新たな戦略を生み出すきっかけになることが期待される。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (22 results)

All 2020 2019 2018 2017 Other

All Int'l Joint Research (2 results) Journal Article (9 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 9 results,  Open Access: 9 results,  Acknowledgement Compliant: 2 results) Presentation (10 results) (of which Int'l Joint Research: 6 results) Book (1 results)

  • [Int'l Joint Research] School of Medicine/Mongolian National University(モンゴル)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] Grifols Immunohematology Center(米国)

    • Related Report
      2017 Research-status Report
  • [Journal Article] Associations of erythrocyte fatty acid compositions with FADS1 gene polymorphism in Japanese mothers and infants.2020

    • Author(s)
      Nita R, Kawabata T, Kagawa Y, Nakayama K, Yanagisawa Y, Iwamoto S, Kimura F, Miyazawa T, Tatsuta N, Arima T, Yaegashi N, Nakai K.
    • Journal Title

      Prostaglandins, Leukotrienes and Essential Fatty Acids

      Volume: 152 Pages: 102031-102031

    • DOI

      10.1016/j.plefa.2019.102031

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Kbtbd11 contributes to adipocyte homeostasis through the activation of upstream stimulatory factor 1.2019

    • Author(s)
      Watanabe K, Yokota K, Yoshida K, Matsumoto A, Iwamoto S
    • Journal Title

      Heliyon

      Volume: 5 Issue: 11 Pages: e02777-e02777

    • DOI

      10.1016/j.heliyon.2019.e02777

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A novel upstream transcription factor 1 target gene N4bp2l1 that regulates adipogenesis.2019

    • Author(s)
      Watanabe K, Yokota K, Yoshida K, Matsumoto A, Iwamoto S
    • Journal Title

      Biochem Biophys Rep.

      Volume: 20 Pages: 100676-100676

    • DOI

      10.1016/j.bbrep.2019.100676

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Kbtbd11 gene expression in adipose tissue increases in response to feeding and affects adipocyte differentiation2019

    • Author(s)
      Watanabe Kazuhisa、Yoshida Ken、Iwamoto Sadahiko
    • Journal Title

      Journal of Diabetes Investigation

      Volume: 印刷中 Issue: 4 Pages: 925-932

    • DOI

      10.1111/jdi.12995

    • Related Report
      2019 Annual Research Report 2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] An adaptive variant of TRIB2, rs1057001, is associated with higher expression levels of thermogenic genes in human subcutaneous and visceral adipose tissues2017

    • Author(s)
      Nakayama K, Iwamoto S
    • Journal Title

      J Phyiol Anthropol

      Volume: 36 Issue: 1 Pages: 16-16

    • DOI

      10.1186/s40101-017-0132-z

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Evidence for Very Recent Positive Selection in Mongolian2017

    • Author(s)
      Nakayama K, Ohashi J, Watanabe K, Munkhtulga L, Iwamoto S.
    • Journal Title

      Molecular Biology and Evolution

      Volume: 印刷中 Issue: 8 Pages: 1936-1946

    • DOI

      10.1093/molbev/msx138

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Influence of AHRR Pro189Ala polymorphism on kidney functions. Biosci Biotech Biochem.2017

    • Author(s)
      Nakayama K, Saito S, Watanabe K, Miyashita H, Nishijima F, Kamo Y, Tada K, Ishizuka S, Niwa T, Iwamoto S, Shimizu H
    • Journal Title

      Biosci Biotech Biochem

      Volume: Published online Issue: 6 Pages: 1120-1124

    • DOI

      10.1080/09168451.2017.1292838

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Effect on gene expression of three allelic variants in GATA motifs of ABO, RHD, and RHCE regulatory elements.2017

    • Author(s)
      Fennell K, Hoffman R, Yoshida K, Iwamoto S, Govender L, Vather K, Sookraj A, Jentsch U, Pambrun C, McAuley C, Keller MA, Ochoa-Garay G.
    • Journal Title

      Transfusion

      Volume: 57 Issue: 11 Pages: 2804-2808

    • DOI

      10.1111/trf.14299

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Identification of deleterious rare variants in MTTP, PNPLA3, and TM6SF2 in Japanese males and association studies with NAFLD.2017

    • Author(s)
      Boonvisut S, Yoshida K, Nakayama K, Watanabe K, Miyashita H, Iwamoto S.
    • Journal Title

      Lipids Health Dis.

      Volume: 16 Issue: 1 Pages: 183-183

    • DOI

      10.1186/s12944-017-0570-y

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] 低緊張と知的障害のFER1L6の変異例.2019

    • Author(s)
      松本歩、長尾恭光、神保恵理子、才津浩智、小坂仁、岩本禎彦、山形崇倫.
    • Organizer
      第64回日本人類遺伝学会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Tribbles Homolog1 (TRIB1)の膵臓β細胞における役割の解明.2019

    • Author(s)
      横田万葉、吉田健、渡邉和寿、松本歩、岩本禎彦.
    • Organizer
      第42回日本分子生物学会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Genome-wide association study of non-obese NAFLD in japanese, the second report.2019

    • Author(s)
      Sadahiko Iwamoto, Ken Yoshida, Kazuha Yokota, Ayumi Matsumoto, Kazuhisa Watanabe, Yosuke Kawai, Masao Nagasaki.
    • Organizer
      International conference on Fatty Liver
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Association study of nonalcoholic fatty liver disease and HLA considering the involvement of microbiome.2019

    • Author(s)
      Kazuha Yokota, Ayumi Matsumoto, Kazutoshi Watanabe, Sadahiko Iwamoto, Yosuke Kawai, Masao Nagasaki.
    • Organizer
      International conference on Fatty Liver
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 非アルコール性脂肪性肝疾患とHLAの関連解析2018

    • Author(s)
      吉田健、横田万葉、渡邉和寿、松本歩、宮下洋、岩本禎彦.
    • Organizer
      日本人類遺伝学会
    • Related Report
      2018 Research-status Report
  • [Presentation] 自閉性障害の概日リズム異常と病因遺伝子解析.2018

    • Author(s)
      松本歩、後藤昌英、宮内彰彦、神保恵理子、岩本禎彦、永田浩一、山形崇倫.
    • Organizer
      日本人類遺伝学会
    • Related Report
      2018 Research-status Report
  • [Presentation] Genome-wide association study of non-obese NAFLD in Japanese.2017

    • Author(s)
      Yoshida K, Nakayama K, Watanabe K, Iwamoto S, Kawai Y, Kojima K, Nagasaki M.
    • Organizer
      International Conference on Fatty Liver
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Rare variants in MTTP, PNPLA3 and TM6SF2 genes associated with NAFLD in Japanese general population.2017

    • Author(s)
      Iwamoto S, Boonvisut S, Yoshida K, Watanabe K, Nakayama K.
    • Organizer
      International Conference on Fatty Liver
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] 便潜血検体を用いた腸内マイクロバイオーム解析の検討.2017

    • Author(s)
      山口琢磨、吉田健、横田万葉、渡邉和寿、中山一大、岩本禎彦
    • Organizer
      第38回日本肥満学会
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] 非肥満非アルコール性脂肪肝のゲノムワイド関連解析と機能的検証.2017

    • Author(s)
      横田万葉、岩本禎彦、渡邉和寿、山口琢磨、吉田健
    • Organizer
      日本人類遺伝学会 第62回大会
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Book] The Molecular Nutrition of Fats2018

    • Author(s)
      Sadahiko Iwamoto,
    • Total Pages
      470
    • Publisher
      ELSEVIER
    • ISBN
      9780128112977
    • Related Report
      2018 Research-status Report

URL: 

Published: 2017-04-28   Modified: 2022-02-22  

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