• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

A datamining approach for genotype-phenotype correlation analysis

Research Project

Project/Area Number 17K15629
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Human genetics
Research InstitutionHamamatsu University School of Medicine

Principal Investigator

Yoshida Shuichi  浜松医科大学, 医学部, 特任助教 (10580574)

Project Period (FY) 2017-04-01 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2019: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2018: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2017: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Keywords遺伝型-表現型予測 / データマイニング / 遺伝子診断 / 遺伝子‐表現型予測 / 遺伝子型-表現型予測 / 遺伝学
Outline of Final Research Achievements

In this study, we proposed a datamining approach using public life science databases for genotype-phenotype correlation analysis. We performed to test our phenotype prediction model for dataset of model disease by cross-validation method. In the result, our prediction model obtained high prediction accuracy.

Academic Significance and Societal Importance of the Research Achievements

本研究における統計学的手法による遺伝型‐表現型相関解析および表現型予測モデルの構築は、将来的に遺伝性疾患の原因となる病的バリアントの探索におけるスクリーニングや遺伝子診断における疾患感受性遺伝子予測等への応用が期待される。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (3 results)

All 2020 2018 2017

All Journal Article (2 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (1 results)

  • [Journal Article] Liganded T3 Receptor β2 Inhibits the Positive Feedback Autoregulation of the Gene for GATA2, a Transcription Factor Critical for Thyrotropin Production2020

    • Author(s)
      Hirahara N, Nakamura HM, Sasaki S, Matsushita A, Ohba K, Kuroda G, Sakai Y, Shinkai S, Haeno H, Nishio T, Yoshida S, Oki Y, Suda T.
    • Journal Title

      PLoS One

      Volume: 15 Issue: 1 Pages: e0227646-e0227646

    • DOI

      10.1371/journal.pone.0227646

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] てんかんと遺伝子解析2017

    • Author(s)
      吉田秀一、兼子直
    • Journal Title

      Clinical Neuroscience

      Volume: 35 Pages: 788-791

    • Related Report
      2017 Research-status Report
  • [Presentation] A Datamining Approach for Genotype-phenotype Correlation of SCN1A-related Epilepsies Based on Physico-chemical Properties Changes2018

    • Author(s)
      S Yoshida, T Nishio
    • Organizer
      The 56th Annual Meeting of The Biophysical Society of Japan
    • Related Report
      2018 Research-status Report

URL: 

Published: 2017-04-28   Modified: 2021-02-19  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi