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Nanopore probe: nano-environment measurement using namespace of a channel protein

Research Project

Project/Area Number 17K19138
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Research Field Inorganic/Coordination chemistry, Analytical chemistry, and related fields
Research InstitutionTokyo University of Agriculture and Technology

Principal Investigator

Kawano Ryuji  東京農工大学, 工学(系)研究科(研究院), 准教授 (90401702)

Project Period (FY) 2017-06-30 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2018: ¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Fiscal Year 2017: ¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Keywordsナノポア / 脂質二分子膜 / マイクロ流体 / 一分子計測 / ホフマイスター効果 / ナノ空間 / DNA / 一分子分析
Outline of Final Research Achievements

Alpha-hemolysin, which is a pore-forming toxin, has 1.4 nm pore in the lipid bilayer. We introduced single hairpin DNA into the pore and observed the movement at the single molecule level. This movement can reflect the state in nano-space, and we attempted to reveal a viscosity effect in the nano-space using glycerol and PEG.

Academic Significance and Societal Importance of the Research Achievements

ナノ空間内での一分子の振る舞いの理解は、生体内での酵素反応などの制限された空間で起こる現象を考える上で役に立つ。本研究では、ナノポアタンパク質の内部のナノ空間内で外部溶液の粘性を変化させたときにナノ空間ではどのような変化を見せるのかについて検討を行い、粘性を発現する基になる相互作用の種類がナノ空間では大きな影響を及ぼすことを明らかとした。

Report

(3 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • Research Products

    (11 results)

All 2019 2018 2017 Other

All Int'l Joint Research (1 results) Journal Article (2 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 2 results) Presentation (6 results) (of which Int'l Joint Research: 3 results) Remarks (2 results)

  • [Int'l Joint Research] シンシナティ大学(米国)

    • Related Report
      2018 Annual Research Report
  • [Journal Article] Spatially Resolved Chemical Detection with a Nanoneedle-Probe-Supported Biological Nanopore2019

    • Author(s)
      Shoji Kan、Kawano Ryuji、White Ryan J.
    • Journal Title

      ACS Nano

      Volume: 13 Pages: 2606-2614

    • DOI

      10.1021/acsnano.8b09667

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Nanopore Probe: Analysis of Hofmeister Effect in Nanospace2017

    • Author(s)
      M. Matsushita and R. Kawano
    • Journal Title

      Proceedings of MicroTAS

      Volume: 1 Pages: 281-282

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Presentation] Chemical sensing using a nanoneedle-based nanopore probe2018

    • Author(s)
      K Shoji, R Kawano, R White
    • Organizer
      256th ACS National Meeting
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ナノポアプローブ:DNAを用いたナノポア内溶液物性の評価2018

    • Author(s)
      松下雅季、川野竜司
    • Organizer
      ナノポア研究会2018
    • Related Report
      2018 Annual Research Report
  • [Presentation] NANOPORE PROBE WITH DNA: ANALYSIS OF SOLUTION BEHAVIOR IN NANOSPACE2018

    • Author(s)
      Masaki Matsushita, Ryuji Kawano
    • Organizer
      第56回日本生物物理学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Nanopore Probe: Analysis of Hofmeister Effect in Nanospace2017

    • Author(s)
      M. Matsushita and R. Kawano
    • Organizer
      The 21st International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS 2017)
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Investigation of Hofmeister effect in nanospace using nanopore and DNA as a probe2017

    • Author(s)
      M. Matsushita and R. Kawano
    • Organizer
      2nd Japan-Korea International Symposium on Cyborgnics: Integration between cell and electronics
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] ナノポアとDNAを用いたナノ空間内におけるホフマイスター効果の検証2017

    • Author(s)
      松下雅季、川野竜司
    • Organizer
      第55回生物物理学会
    • Related Report
      2017 Research-status Report
  • [Remarks] 東京農工大学 川野研究室

    • URL

      http://web.tuat.ac.jp/~rjkawano/index.html

    • Related Report
      2018 Annual Research Report
  • [Remarks] 東京農工大 川野研究室

    • URL

      http://web.tuat.ac.jp/~rjkawano/index.html

    • Related Report
      2017 Research-status Report

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Published: 2017-07-21   Modified: 2020-03-30  

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