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Study for molecules initiated lipid related disease biomarkers

Research Project

Project/Area Number 17K19188
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Research Field Biomolecular chemistry and related fields
Research InstitutionHokkaido University

Principal Investigator

Monde Kenji  北海道大学, 先端生命科学研究院, 教授 (40210207)

Co-Investigator(Kenkyū-buntansha) 村井 勇太  北海道大学, 先端生命科学研究院, 助教 (20707038)
Project Period (FY) 2017-06-30 – 2020-03-31
Project Status Completed (Fiscal Year 2019)
Budget Amount *help
¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2019: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2018: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2017: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywordsバイオマーカー / スフィンゴシン / セラミド / 異常取り込み / ライブラリー
Outline of Final Research Achievements

L-serine, the head part of a sphingosine, is incorporated by serine palmitoyl transferase (SPT), coupled with a palmitoyl CoA in the first stage of its biosynthesis and converted into ceramides. Recently, it has been suggested that not only L-serine but also other amino acids may be incorporated into this biosynthetic system, and its association with lipid-related diseases has been trend. We have been succeeded in synthesizing sphingosines having phenylalanine, alanine, tryptophan, leucine, cysteine, and threonine in its head part for the purpose of providing authentic standard samples in a mass spectrometric analysis. We also constructed a unique ceramide library by binding some of these to fatty acids. It was found that some of them showed inhibitory activity of sphingomyelin synthase.

Academic Significance and Societal Importance of the Research Achievements

スフィンゴ脂質は、動物、植物、バクテリア等ほとんどすべての生物にあまねく広く存在する。細胞膜の構成成分であると同時に、情報伝達、皮膚バリア機能等に重要な役割を果たしている。その基本構造であるスフィンゴシン骨格は、セリンとパルミトイルCoAからセリンパルミトイル転移酵素によって生合成される。近年、その他のアミノ酸が取り込みの可能性と疾患との関連性が示唆されているが、原因物質検出のための標準化合物は、これまで化学合成されていない。本研究では、異常取り込みの結果、生合成される可能性がある物質の化学合成を世界で初めて化学合成することに成功した。これにより脂質関連疾患のバイオマーカー研究が推進される。

Report

(4 results)
  • 2019 Annual Research Report   Final Research Report ( PDF )
  • 2018 Research-status Report
  • 2017 Research-status Report
  • Research Products

    (36 results)

All 2020 2019 2018 2017 Other

All Int'l Joint Research (4 results) Journal Article (14 results) (of which Int'l Joint Research: 5 results,  Peer Reviewed: 13 results,  Open Access: 4 results) Presentation (14 results) (of which Int'l Joint Research: 10 results,  Invited: 5 results) Book (1 results) Remarks (3 results)

  • [Int'l Joint Research] マラヤ大学/マラ工科大学(マレーシア)

    • Related Report
      2018 Research-status Report
  • [Int'l Joint Research] モンゴル国立大学(モンゴル)

    • Related Report
      2018 Research-status Report
  • [Int'l Joint Research] マラヤ大学/マラ工科大学(マレーシア)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] モンゴル国立大学(モンゴル)

    • Related Report
      2017 Research-status Report
  • [Journal Article] Nrp1 is activated by kCer binding-induced structural rigidification of the a1a2 domain2020

    • Author(s)
      Usuki S., Yasutake Y., Tamura N., Tamura T., Tanji K., Saitoh T., Murai Y., Mikami D., Yuyama K., Monde K., Mukai K., Igarashi Y.
    • Journal Title

      Cells

      Volume: -

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Chiral combinatorial preparation and biological evaluation of unique ceramides for inhibition of sphingomyelin synthase2020

    • Author(s)
      Koolath Sajeer、Murai Yuta、Suga Yoshiko、Monde Kenji
    • Journal Title

      Chirality

      Volume: 32 Issue: 3 Pages: 308-313

    • DOI

      10.1002/chir.23179

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Design and Synthesis of Ligand-Tag Exchangeable Photoaffinity Probe Utilizing Nosyl Chemistry2019

    • Author(s)
      Saaidin Aimi Suhaily、Murai Yuta、Ishikawa Takuya、Monde Kenji
    • Journal Title

      European Journal of Organic Chemistry

      Volume: 2019 Issue: 46 Pages: 7563-7567

    • DOI

      10.1002/ejoc.201901348

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Malabaricone C as Natural Sphingomyelin Synthase Inhibitor against Diet-Induced Obesity and Its Lipid Metabolism in Mice2019

    • Author(s)
      Othman Muhamad Aqmal、Yuyama Kohei、Murai Yuta、Igarashi Yasuyuki、Mikami Daisuke、Sivasothy Yasodha、Awang Khalijah、Monde Kenji
    • Journal Title

      ACS Medicinal Chemistry Letters

      Volume: 10 Issue: 8 Pages: 1154-1158

    • DOI

      10.1021/acsmedchemlett.9b00171

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] An automated microliter-scale high-throughput screening system (MSHTS) for real-time monitoring of protein aggregation using quantum-dot nanoprobes2019

    • Author(s)
      Sasaki Rina、Tainaka Reina、Ando Yuichi、Hashi Yurika、Deepak Hadya V.、Suga Yoshiko、Murai Yuta、Anetai Masaki、Monde Kenji、Ohta Kiminori、Ito Ikuko、Kikuchi Haruhisa、Oshima Yoshiteru、Endo Yasuyuki、Nakao Hitomi、Sakono Masafumi、Uwai Koji、Tokuraku Kiyotaka
    • Journal Title

      Scientific Reports

      Volume: 9 Issue: 1 Pages: 2587-2587

    • DOI

      10.1038/s41598-019-38958-0

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Determination of the Absolute Configurations and Sensory Properties of the Enantiomers of a Homologous Series (C6-C10) of 2-Mercapto-4-alkanones2019

    • Author(s)
      Kiske Christiane、Riegel Anja Devenie、Hopf Ronja、Kvindt Anna、Poplacean Iulia、Taniguchi Tohru、Swamy Mahadeva M. M.、Monde Kenji、Eisenreich Wolfgang、Engel Karl-Heinz
    • Journal Title

      Journal of Agricultural and Food Chemistry

      Volume: 67 Issue: 4 Pages: 1187-1196

    • DOI

      10.1021/acs.jafc.8b06599

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Preparation of Carbodiimides with One-Handed Axial Chirality2018

    • Author(s)
      Taniguchi Tohru、Suzuki Takahiro、Satoh Haruka、Shichibu Yukatsu、Konishi Katsuaki、Monde Kenji
    • Journal Title

      Journal of the American Chemical Society

      Volume: 140 Issue: 46 Pages: 15577-15581

    • DOI

      10.1021/jacs.8b08969

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Synthesis and Photochemical Properties of Axially Chiral Bis(dinaphthofuran)2018

    • Author(s)
      Katakami Chiaki、Kamo Shogo、Torii Ayame、Hara Nobuyuki、Imai Yoshitane、Taniguchi Tohru、Monde Kenji、Okabayashi Yusuke、Hosokai Takuya、Kuramochi Kouji、Tsubaki Kazunori
    • Journal Title

      The Journal of Organic Chemistry

      Volume: 83 Issue: 23 Pages: 14610-14616

    • DOI

      10.1021/acs.joc.8b02424

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Structure-inspired design of a sphingolipid mimic sphingosine-1-phosphate receptor agonist from a naturally occurring sphingomyelin synthase inhibitor2018

    • Author(s)
      M.M.M. Swamy, Y Murai, Y Ohno, K Jojima, A Kihara, S Mitsutake, Y Igarashi, J Yu, M Yao, Y Suga, M Anetai and K Monde
    • Journal Title

      Chem. Commun.

      Volume: 54 Issue: 90 Pages: 12758-12761

    • DOI

      10.1039/c8cc05595e

    • NAID

      120006767539

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Palladium-Catalyzed Asymmetric C(sp3)-H Allylation of 2-Alkylpyridines2018

    • Author(s)
      Murakami Ryo、Sano Kentaro、Iwai Tomohiro、Taniguchi Tohru、Monde Kenji、Sawamura Masaya
    • Journal Title

      Angewandte Chemie International Edition

      Volume: 57 Issue: 30 Pages: 9465-9469

    • DOI

      10.1002/anie.201802821

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Enantio- and Diastereoselective Synthesis of Latanoprost using an Organocatalyst2018

    • Author(s)
      Kawauchi Genki、Umemiya Shigenobu、Taniguchi Tohru、Monde Kenji、Hayashi Yujiro
    • Journal Title

      Chemistry - A European Journal

      Volume: 24 Issue: 33 Pages: 8409-8414

    • DOI

      10.1002/chem.201800829

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Journal Article] Facile Chemoselective Strategy toward Capturing Sphingoid Bases by a Unique Glutaraldehyde-Functionalized Resin2018

    • Author(s)
      Gowda Siddabasave Gowda B.、Nakahashi Atsufumi、Yamane Keiko、Nakahashi Saori、Murai Yuta、Siddegowda Ananda Kumar C.、Hammam Mostafa A. S.、Monde Kenji
    • Journal Title

      ACS Omega

      Volume: 3 Issue: 1 Pages: 753-759

    • DOI

      10.1021/acsomega.7b01440

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Modifying oligoalanine conformation by replacement of amide to ester linkage2018

    • Author(s)
      Hongen Takahiro、Taniguchi Tohru、Monde Kenji
    • Journal Title

      Chirality

      Volume: 30 Issue: 4 Pages: 396-341

    • DOI

      10.1002/chir.22823

    • NAID

      120006600949

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] 化学プローブは求愛タンパク質の心をどう射留めるのか?-生命現象解明・創薬に小分子の視点か2017

    • Author(s)
      門出健次、村井勇太
    • Journal Title

      化学

      Volume: 72 Pages: 70-71

    • Related Report
      2017 Research-status Report
  • [Presentation] Sphingolipid Chemical Biology toward Drug Discovery from Nature2019

    • Author(s)
      Kenji Monde
    • Organizer
      Symposium “Recent Trends in Medicinal Chemistry”
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Naturally Occurring Sphingomyelin Synthase Inhibitors against Diet-Induced Obesity and their Action Mechanism2019

    • Author(s)
      Kenji Monde
    • Organizer
      2nd Chemical Biology Workshop (ChemBiol Workshop)
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Naturally Occurring Sphingomyelin Synthase Inhibitors against Diet-Induced Obesity and their Action Mechanism2019

    • Author(s)
      Kenji Monde
    • Organizer
      The Fourth A3 Roundtable Meeting on Asia Chemical Probe Research Hub
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Sphingosine Chemical Biology2019

    • Author(s)
      Kenji Monde
    • Organizer
      Hunter Collage Seminor
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 赤外円二色性スペクトルによる生命分子のキラリティ解明2019

    • Author(s)
      門出 健次
    • Organizer
      第30回万有仙台シンポジウム
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 分子キラリティの計測・理論技術の革新から迫る 生命機能研究の新展開2019

    • Author(s)
      門出 健次
    • Organizer
      第23回HiSOR研究会
    • Related Report
      2018 Research-status Report
    • Invited
  • [Presentation] Study on the efficient synthesis of acylceramides including ω-9 unsaturated ultra-long-chain fatty acids towards skin barrier care2019

    • Author(s)
      Kenji Monde
    • Organizer
      Asian Chemical Biology Initiative (ACBI) 2019 Yangon Meeting
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] 天然及び基質アナログ合成によるスフィンゴミエリン合成酵素阻害剤の開発2018

    • Author(s)
      村井勇太、 Mahadeva M. M. Swam、小林悠、土見祐介、ハンマン・モスタファ、須賀好子、五十嵐靖之、岡崎俊朗、姉帯正樹、門出健次
    • Organizer
      第13回スフィンゴテラピィ(STC)研究会
    • Related Report
      2018 Research-status Report
  • [Presentation] Discovering sphingomyelin synthase (SMS) inhibitors from natural resources and synthetic and semi synthetic library2018

    • Author(s)
      Kenji Monde
    • Organizer
      A3 Roundtable Meeting on Asia Chemical Probe Research
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] 赤外円二色性(VCD)法による絶対配置決定法の開発2018

    • Author(s)
      門出 健次
    • Organizer
      シンポジウム モレキュラー・キラリティー2018
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] ケミカルバイオロジーによるSMS阻害剤の開発2017

    • Author(s)
      門出 健次
    • Organizer
      北海道大学次世代物質生命科学研究センター 「脂質機能性解明研究部門」設置記念シンポジウム
    • Related Report
      2017 Research-status Report
    • Invited
  • [Presentation] Naturally occurring sphingomyelin synthase inhibitor inspiring sphingo-mimic2017

    • Author(s)
      Kenji Monde
    • Organizer
      Asian Chemical Biology Initiative (ACBI) 2017 Ulaanbaatar Meeting
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Chiral Analysis of Lipids by Vibrational Circular Dichroism2017

    • Author(s)
      Kenji Monde
    • Organizer
      the 2nd Asian Conference on Oleo Science (ACOS 2017)
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Presentation] Naturally occurring sphingomyelin synthase inhibitor inspiring sphingo-mimic2017

    • Author(s)
      Kenji Monde
    • Organizer
      A3 Roundtable Meeting on Asia Chemical Probe Research
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research
  • [Book] セラミド研究会 編 セラミド研究の新展開 ~基礎から応用へ~2019

    • Author(s)
      村井勇太、門出健次
    • Total Pages
      337
    • Publisher
      食品化学新聞社
    • Related Report
      2019 Annual Research Report
  • [Remarks] 北海道大学大学院先端生命科学研究院付属施設次世代物質生命科学センター Annual Report

    • URL

      https://life.sci.hokudai.ac.jp/fr/annual-report

    • Related Report
      2019 Annual Research Report
  • [Remarks] 北海道大学大学院先端生命科学研究院 化学生物学研究室

    • URL

      http://altair.sci.hokudai.ac.jp/infchb/sub/publication.html

    • Related Report
      2019 Annual Research Report 2018 Research-status Report 2017 Research-status Report
  • [Remarks] 北海道大学大学院先端生命科学研究院付属施設次世代物質生命科学研究センター Annual Report

    • URL

      https://life.sci.hokudai.ac.jp/fr/annual-report

    • Related Report
      2018 Research-status Report 2017 Research-status Report

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Published: 2017-07-21   Modified: 2022-12-28  

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