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Studies on mechanisms of Oil body biogenesis in Marchantia polymorpha

Research Project

Project/Area Number 17K19412
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Research Field Biology of Cells to Organisms, and related fields
Research InstitutionNational Institute for Basic Biology

Principal Investigator

Ueda Takashi  基礎生物学研究所, 細胞動態研究部門, 教授 (10311333)

Research Collaborator Kanazawa Takehiko  
Project Period (FY) 2017-06-30 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2018: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Fiscal Year 2017: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Keywords苔類 / 油体 / 進化 / 分泌経路 / 転写因子 / 膜タンパク質 / ゼニゴケ / SNARE / 植物 / 細胞・組織
Outline of Final Research Achievements

Liverworts including Marchantia polymorpha possess a liverwort-unique organelle, which is referred to as the oil body. The oil body has been known to contain various bioactive compounds including Marchantin, however, molecular mechanisms of oil body biogenesis remains totally unknown. In this study, aimed to unravel molecular mechanisms of oil body formation. we found that formation of the oil body and the cell plate share many machineries including SNARE proteins and microtubules. We also discovered the master regulator of oil body biogenesis, whose overexpression results in ectopic oil body formation. Furthermore, we systematically identified genes acting under the regulation of the master transcription factor for oil body formation.

Academic Significance and Societal Importance of the Research Achievements

油体のような真核生物のある系統が特異的に獲得したオルガネラの生成機構を明らかにすることで,真核生物におけるオルガネラの進化の道筋を再構成することが可能となると期待される.さらに,オルガネラ新生の分子機構の知見は,新たなオルガネラを創り出すための基盤技術の開発に繋がる可能性もある.また,ゼニゴケの油体には抗真菌活性や抗がん活性,抗ウイルス活性を呈すると報告されている化合物が含まれており,油体形成ではたらく遺伝子群の網羅的な同定が,これらの物質の合成機序の解明につながることも期待される.

Report

(3 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • Research Products

    (28 results)

All 2018 2017 Other

All Int'l Joint Research (5 results) Journal Article (16 results) (of which Int'l Joint Research: 7 results,  Peer Reviewed: 16 results,  Open Access: 11 results,  Acknowledgement Compliant: 1 results) Presentation (6 results) (of which Int'l Joint Research: 6 results,  Invited: 6 results) Remarks (1 results)

  • [Int'l Joint Research] Monash University(オーストラリア)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] Heidelberg University/Max Planck Institute(Germany)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] ETH Zurich(Switzerland)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] Monash University(Australia)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] University of Toronto(Canada)

    • Related Report
      2017 Research-status Report
  • [Journal Article] A Golgi-Released Subpopulation of the Trans-Golgi Network Mediates Protein Secretion in Arabidopsis2018

    • Author(s)
      Uemura Tomohiro、Nakano Ryohei Thomas、Takagi Junpei、Wang Yiming、Kramer Katharina、Finkemeier Iris、Nakagami Hirofumi、Tsuda Kenichi、Ueda Takashi、Schulze-Lefert Paul、Nakano Akihiko
    • Journal Title

      Plant Physiology

      Volume: 179 Issue: 2 Pages: 519-532

    • DOI

      10.1104/pp.18.01228

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A whole-cell electron tomography model of vacuole biogenesis in Arabidopsis root cells2018

    • Author(s)
      Cui Yong、Cao Wenhan、He Yilin、Zhao Qiong、Wakazaki Mayumi、Zhuang Xiaohong、Gao Jiayang、Zeng Yonglun、Gao Caiji、Ding Yu、Wong Hiu Yan、Wong Wing Shing、Lam Ham Karen、Wang Pengfei、Ueda Takashi、Rojas-Pierce Marcela、Toyooka Kiminori、Kang Byung-Ho、Jiang Liwen
    • Journal Title

      Nature Plants

      Volume: 5 Issue: 1 Pages: 95-105

    • DOI

      10.1038/s41477-018-0328-1

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] ANTH domain-containing proteins are required for the pollen tube plasma membrane integrity via recycling ANXUR kinases2018

    • Author(s)
      Muro Keita、Matsuura-Tokita Kumi、Tsukamoto Ryoko、Kanaoka Masahiro M.、Ebine Kazuo、Higashiyama Tetsuya、Nakano Akihiko、Ueda Takashi
    • Journal Title

      Communications Biology

      Volume: 1 Issue: 1 Pages: 152-152

    • DOI

      10.1038/s42003-018-0158-8

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Transcriptional switch for programmed cell death in pith parenchyma of sorghum stems.2018

    • Author(s)
      Fujimoto M, Sazuka T, Oda Y, Kawahigashi H, Wu J, Takanashi H, Ohnishi T, Yoneda JI, Ishimori M, Kajiya-Kanegae H, Hibara KI, Ishizuna F, Ebine K, Ueda T, Tokunaga T, Iwata H, Matsumoto T, Kasuga S, Yonemaru JI, Tsutsumi N
    • Journal Title

      Proceedings of the National Academy of Sciences of the United States of America

      Volume: 115 Issue: 37

    • DOI

      10.1073/pnas.1807501115

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Involvement of S-type anion channels in disease resistance against an oomycete pathogen in Arabidopsis seedling2018

    • Author(s)
      Takamitsu Kurusu, T., Mitsuka, D., Yagi, C., Kitahata, N., Tsutsui, T., Ueda, T., Yamamoto, Y., Negi, J., Iba, K., Betsuyaku, S., Kuchitsu, K.
    • Journal Title

      Commun. Integr. Biol.

      Volume: 11 Pages: 1-6

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Integration of two RAB5 groups during endosomal transport in plants2018

    • Author(s)
      Ito, E., Ebine, K., Choi, S., Uemura, T., Nakano, A. and Ueda, T.
    • Journal Title

      eLife,

      Volume: 7

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Distinct sets of tethering complexes, SNARE complexes, and Rab GTPases mediate membrane fusion at the vacuole in Arabidopsis2018

    • Author(s)
      Takemoto Kodai、Ebine Kazuo、Askani Jana Christin、Kruger Falco、Gonzalez Zaida Andres、Ito Emi、Goh Tatsuaki、Schumacher Karin、Nakano Akihiko、Ueda Takashi
    • Journal Title

      Proc Natl Acad Sci USA.

      Volume: 115 Issue: 10

    • DOI

      10.1073/pnas.1717839115

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] RAB GTPases in the Basal Land Plant Marchantia polymorpha2018

    • Author(s)
      Minamino Naoki、Kanazawa Takehiko、Era Atsuko、Ebine Kazuo、Nakano Akihiko、Ueda Takashi
    • Journal Title

      Plant Cell Phys.

      Volume: in press Issue: 4 Pages: 850-861

    • DOI

      10.1093/pcp/pcy027

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] The Cellulose Synthases Are Cargo of the TPLATE Adaptor Complex2018

    • Author(s)
      Sanchez-Rodriguez Clara、Shi Yanyun、Kesten Christopher、Zhang Dongmei、Sancho-Andres Gloria、Ivakov Alexander、Lampugnani Edwin R.、Sklodowski Kamil、Fujimoto Masaru、Nakano Akihiko、Bacic Antony、Wallace Ian S.、Ueda Takashi、Van Damme Daniel、Zhou Yihua、Persson Staffan
    • Journal Title

      Mol. Plant

      Volume: 11 Issue: 2 Pages: 346-349

    • DOI

      10.1016/j.molp.2017.11.012

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome.2017

    • Author(s)
      Bowman J, Kouchi T,..(106名)..Yokoyama R, ..(4名)
    • Journal Title

      Cell

      Volume: 171 Issue: 2 Pages: 287-304

    • DOI

      10.1016/j.cell.2017.09.030

    • NAID

      120006353839

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The GYF domain protein PSIG1 dampens the induction of cell death during plant-pathogen interactions2017

    • Author(s)
      Matsui Hidenori、Nomura Yuko、Egusa Mayumi、Hamada Takahiro、Hyon Gang-Su、Kaminaka Hironori、Watanabe Yuichiro、Ueda Takashi、Trujillo Marco、Shirasu Ken、Nakagami Hirofumi
    • Journal Title

      PLOS Genet.

      Volume: 13 Issue: 10 Pages: 1-29

    • DOI

      10.1371/journal.pgen.1007037

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Triphosphate Tunnel Metalloenzyme Function in Senescence Highlights a Biological Diversification of This Protein Superfamily2017

    • Author(s)
      Ung Huoi、Karia Purva、Ebine Kazuo、Ueda Takashi、Yoshioka Keiko、Moeder Wolfgang
    • Journal Title

      Plant Phys.

      Volume: 175 Issue: 1 Pages: 473-485

    • DOI

      10.1104/pp.17.00700

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Constitutive activation of plant-specific RAB5 GTPase confers increased resistance against adapted powdery mildew fungus2017

    • Author(s)
      Inada, N., Ebine, K., Ito, E., Nakano, A., and Ueda, T.
    • Journal Title

      Plant Biotechnology

      Volume: 34 Issue: 2 Pages: 89-95

    • DOI

      10.5511/plantbiotechnology.17.0501a

    • NAID

      130006789286

    • ISSN
      1342-4580, 1347-6114
    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] The trans-Golgi network and the Golgi stacks behave independently during regeneration after Brefeldin A treatment in tobacco BY-2 cells2017

    • Author(s)
      Ito, Y., Toyooka, K., Fujimoto, M., Ueda, T., Uemura, T. and Nakano A.
    • Journal Title

      Plant Cell Phys.

      Volume: 印刷中 Issue: 4 Pages: 811-821

    • DOI

      10.1093/pcp/pcx028

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Dynamic reorganization of the endomembrane system during spermatogenesis in Marchantia polymorpha2017

    • Author(s)
      Minamino, N., Kanazawa, T., Nishihama, R., Yamato, T.K., Ishizaki, K., Kohchi, T., Nakano, A. and Ueda, T.
    • Journal Title

      J. Plant Res.

      Volume: 印刷中 Issue: 3 Pages: 433-441

    • DOI

      10.1007/s10265-017-0909-5

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Exocytic trafficking pathways in plants: why and how they are redirected2017

    • Author(s)
      Kanazawa Takehiko、Ueda Takashi
    • Journal Title

      New Phytol.

      Volume: 215 Issue: 3 Pages: 952-957

    • DOI

      10.1111/nph.14613

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Roles and regulation of membrane traffic in spermatogenesis of Marchantia polymorpha2018

    • Author(s)
      Takashi Ueda
    • Organizer
      EMBO workshop “New shores in land plant evolution”
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Adaptor proteins involved in clathrin-mediated endocytosis in plant cells2018

    • Author(s)
      Takashi Ueda
    • Organizer
      CoB workshop “Cellular gateways: expanding the role of endocytosis in plant development”
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Diversification of membrane trafficking pathways during land plant evolution unraveled with Marchantia polymorpha2017

    • Author(s)
      Takashi Ueda
    • Organizer
      The 65th NIBB conference Renaissance of Marchantia polymorpha -the genome and beyond-
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Evolution of plant membrane trafficking system driven by diversification of RAB and SNARE protreins2017

    • Author(s)
      Takashi Ueda
    • Organizer
      4th AoE Symposium on Organelle Biogenesis and Function
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Diversification of membrane trafficking pathways during land plant evolution2017

    • Author(s)
      Takashi Ueda
    • Organizer
      Taiwan-Japan Plant Biology 2017
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Diversification of membrane trafficking pathways during land plant evolution2017

    • Author(s)
      Takashi Ueda
    • Organizer
      SEB Gothenburg 201
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Remarks] 基礎生物学研究所 細胞動態研究部門

    • URL

      http://www.nibb.ac.jp/cellular/

    • Related Report
      2018 Annual Research Report

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Published: 2017-07-21   Modified: 2020-03-30  

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