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Design of ligand-tag exchangeable new photoaffinity probe utilizing nosyl chemistry

Research Project

Project/Area Number 18K14350
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 37030:Chemical biology-related
Research InstitutionHokkaido University

Principal Investigator

Murai Yuta  北海道大学, 先端生命科学研究院, 助教 (20707038)

Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2020: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2019: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2018: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords光アフィニティーラベル / ジアジリン / 芳香族求核置換反応 / マイゼンハイマー錯体 / ノシル基 / スフィンゴミエリン合成酵素 / 阻害剤 / マルチタグ / 芳香族求核反応
Outline of Final Research Achievements

In existing photoaffinity labeling methods, there are some problems such as decreasing the original affinity of a ligand due to their bulkiness of the photoaffinity probe and complicated work within an analysis time. Therefore, innovative improvement of the photoaffinity labeling methodology as a simpler analysis tool for all researchers is required. In this study, I developed a novel photoaffinity probe possessing multi-tag exchangeable ability utilizing the characteristics of the nosyl chemistry. The developed photoaffinity probe improved the photolabeling efficiency to the target molecule, and can be exchanged for detection groups (fluorescent group or ion sensitizer) of the ligand by nucleophilic aromatic substituted reaction (SNAr). These advantages was able to overcome the previous problems and may contribute a large number of chamical biology research field.

Academic Significance and Societal Importance of the Research Achievements

これまで解析が困難であった光アフィニティーラベル対象物(極微量なタンパク質)にも適用が可能であり、従来では数ヶ月以上要した解析期間を数週間程度に減らすことも可能であると期待される。これによってx線結晶構造解析やSTD-NMRで困難となっている対象の構造基盤創薬の代替法として活用でき、特に膜タンパク質などの創薬ターゲットとなる生体分子への応用が広がれば、その開発速度により一層拍車がかかると期待される。

Report

(4 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (23 results)

All 2021 2020 2019 2018

All Journal Article (4 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 4 results,  Open Access: 2 results) Presentation (19 results) (of which Int'l Joint Research: 1 results)

  • [Journal Article] Daurichromenic Acid from the Chinese Traditional Medicinal Plant Rhododendron dauricum Inhibits Sphingomyelin Synthase and Aβ Aggregation2020

    • Author(s)
      Deepak Hadya Virupaksha、Swamy Mahadeva M. M.、Murai Yuta、Suga Yoshiko、Anetai Masaki、Yo Takuro、Kuragano Masahiro、Uwai Koji、Tokuraku Kiyotaka、Monde Kenji
    • Journal Title

      Molecules

      Volume: 25 Issue: 18 Pages: 4077-4077

    • DOI

      10.3390/molecules25184077

    • NAID

      120006900321

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Chiral combinatorial preparation and biological evaluation of unique ceramides for inhibition of sphingomyelin synthase2020

    • Author(s)
      Koolath Sajeer、Murai Yuta、Suga Yoshiko、Monde Kenji
    • Journal Title

      Chirality

      Volume: 32 Issue: 3 Pages: 308-313

    • DOI

      10.1002/chir.23179

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Design and Synthesis of Ligand-Tag Exchangeable Photoaffinity Probe Utilizing Nosyl Chemistry2019

    • Author(s)
      Saaidin Aimi Suhaily、Murai Yuta、Ishikawa Takuya、Monde Kenji
    • Journal Title

      European Journal of Organic Chemistry

      Volume: 2019 Issue: 46 Pages: 7563-7567

    • DOI

      10.1002/ejoc.201901348

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Structure-inspired design of a sphingolipid mimic sphingosine-1-phosphate receptor agonist from a naturally occurring sphingomyelin synthase inhibitor2018

    • Author(s)
      M.M.M. Swamy, Y Murai, Y Ohno, K Jojima, A Kihara, S Mitsutake, Y Igarashi, J Yu, M Yao, Y Suga, M Anetai and K Monde
    • Journal Title

      Chem. Commun.

      Volume: 54 Issue: 90 Pages: 12758-12761

    • DOI

      10.1039/c8cc05595e

    • NAID

      120006767539

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] 精巣、精子活性に関わる極長鎖多価不飽和脂肪酸含有スフィンゴ脂質の合成2021

    • Author(s)
      磯部 利仁、村井 勇太、門出 健次
    • Organizer
      日本化学会北海道支部2021年冬季研究発表会
    • Related Report
      2020 Annual Research Report
  • [Presentation] スフィンゴミエリン合成酵素2(SMS2)阻害剤による 急性白血病抑制効果および阻害剤-SMS2結合様式の検討2021

    • Author(s)
      土見 祐介、村井 勇太、門出 健次
    • Organizer
      日本化学会北海道支部2021年冬季研究発表会
    • Related Report
      2020 Annual Research Report
  • [Presentation] キラルHPLCによる生合成3-ケトジヒドロスフィンゴシンの立体解析法の開発と代謝産物解析2021

    • Author(s)
      本田 拓巳、村井 勇太、生城 浩子、矢野 貴人、門出 健次
    • Organizer
      第63回日本脂質生化学会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Design and Synthesis of Ligand-Tag Exchangeable Photocrosslinker Utilizing Nosyl Chemistry2021

    • Author(s)
      Yuta Murai, Aimi Suhaily Saaidin, Takuya Ishikawa, Kenji Monde
    • Organizer
      PacifiChem2021
    • Related Report
      2020 Annual Research Report
  • [Presentation] マラバリコーンCによるスフィンゴミエリン合成酵素阻害とin vivoへの応用2020

    • Author(s)
      村井勇太、Othman Aqmal、湯山耕平、五十嵐靖之、三上大輔、Sivasothy Yasodha、Awang Khalijah、門出健次
    • Organizer
      第14回スフィンゴテラピー研究会
    • Related Report
      2019 Research-status Report
  • [Presentation] キラルHPLCを利用したOPA化スフィンゴシンの 迅速立体解析法の確立2020

    • Author(s)
      関口晃弘、村井勇太、門出健次
    • Organizer
      日本化学会北海道支部2020年冬季研究発表会
    • Related Report
      2019 Research-status Report
  • [Presentation] マルチタグ交換可能なノシル型ジアジリン光ラベル試薬の創製2020

    • Author(s)
      村井 勇太、スハイリー サェーディン アイミ、石川 卓弥、門出 健次
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Research-status Report
  • [Presentation] 皮膚障害治療への応用を指向した不飽和超長鎖脂肪酸含有アシルセラミドの合成2019

    • Author(s)
      磯部 利仁、村井勇太、門出健次
    • Organizer
      日本化学会北海道支部2019年夏季研究発表会
    • Related Report
      2019 Research-status Report
  • [Presentation] Malabaricone C as Natural Sphingomyelin Synthase Inhibitor against Diet-Induced Obesity and Its Lipid Metabolism in Mice2019

    • Author(s)
      Muhamad Aqmal Othman、Kohei Yuyama、Yuta Murai、Yasuyuki Igarashi、Daisuke Mikami、Yasodha Sivasothy、Khalijah Awang、Kenji Monde
    • Organizer
      第61回天然有機化合物討論会
    • Related Report
      2019 Research-status Report
  • [Presentation] Creation of a sphingosine-1-phosphate mimic by chemical modification of a naturally occurring sphingomyelin synthase inhibitor2019

    • Author(s)
      Yuta Murai、Mahadeva M. M. Swamy、Yusuke Ohno、Keisuke Jojima、Akio Kihara、Yasuyuki Igarashi、Kenji Monde
    • Organizer
      Bioactive Lipids in Cancer, Inflammation and Related Diseases
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] 肥満、慢性炎症に対する相互作用の解明を目指した3種の非天然型キラルGM3の合成2019

    • Author(s)
      鈴木智矢、Sajeer Koolath、村井勇太、門出健次
    • Organizer
      日本化学会北海道支部2019年冬季研究発表会
    • Related Report
      2018 Research-status Report
  • [Presentation] Design and Synthesis of Novel Nosyl-type Diazirines in Photoaffinity Labelling Towards the Elucidation of Ligand-Protein Binding Mode2019

    • Author(s)
      Aimi Suhaily Saaidin, Murai Yuta, Monde Kenji
    • Organizer
      日本化学会 第99春季年会
    • Related Report
      2018 Research-status Report
  • [Presentation] スフィンゴミエリン合成酵素2阻害を標的としたセラミドアナログの創製2018

    • Author(s)
      村井勇太、小林悠真、ハンマン・モスタファ、須賀好子、五十嵐靖之、門出健次
    • Organizer
      第13回ケミカルバイオロジー学会
    • Related Report
      2018 Research-status Report
  • [Presentation] バイオマーカー及び脂質代謝酵素の制御を指向したアミノ酸置換スフィンゴミミックの合成2018

    • Author(s)
      藤田将平、村井勇太、五十嵐靖之、門出健次
    • Organizer
      日本化学会北海道支部2018年夏季研究発表会
    • Related Report
      2018 Research-status Report
  • [Presentation] Design and Synthesis of Nosyl-type Diazirines in Photoaffinity Labelling towards the Elucidation of Ligand-Protein Binding Mode2018

    • Author(s)
      Aimi Suhaily Saaidin, Ishikawa Takuya, Murai Yuta, Monde Kenji
    • Organizer
      日本化学会北海道支部2018年夏季研究発表会
    • Related Report
      2018 Research-status Report
  • [Presentation] Synthesis of stereoisomers of GM3 towards discovery of their role in obesity related insulin resistance2018

    • Author(s)
      Sajeer Koolath, Murai Yuta, Suzuki Tomoya, Kanoh Hirotaka, Inokuchi Jin-ichi, Monde Kenji
    • Organizer
      日本化学会北海道支部2018年夏季研究発表会
    • Related Report
      2018 Research-status Report
  • [Presentation] Synthesis of GM3 stereoisomers and investigating their effects on obesity induced insulin resistance2018

    • Author(s)
      Sajeer Koolath, Murai Yuta, Suzuki Tomoya, Kanoh Hirotaka, Inokuchi Jin-ichi, Monde Kenji
    • Organizer
      第37回日本糖質学会年会
    • Related Report
      2018 Research-status Report
  • [Presentation] 皮膚バリアの重要因子超長鎖脂肪酸含有アシルセラミドの合成研究2018

    • Author(s)
      村井勇太、小川 連、端野翔太、門出健次
    • Organizer
      第60回天然有機化合物討論会
    • Related Report
      2018 Research-status Report
  • [Presentation] ω-9位不飽和超長鎖脂肪酸含有アシルセラミドの効率的な合成研究2018

    • Author(s)
      村井勇太、小川 連、端野翔太、磯部利仁、門出健次
    • Organizer
      第11回せラミド研究会
    • Related Report
      2018 Research-status Report

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Published: 2018-04-23   Modified: 2022-01-27  

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