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Elucidation of HIV-1 pathogenesis dictated by the interplay between viral factor and host factor on the cell membrane

Research Project

Project/Area Number 18K15170
Research Category

Grant-in-Aid for Early-Career Scientists

Allocation TypeMulti-year Fund
Review Section Basic Section 49060:Virology-related
Research InstitutionKumamoto University

Principal Investigator

Toyoda Mako  熊本大学, ヒトレトロウイルス学共同研究センター, 特任助教 (70771129)

Project Period (FY) 2018-04-01 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2019: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2018: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
KeywordsHIV-1 / SERINC5 / Nef / 感染者コホート / SERINC3/5 / 宿主制限因子 / ウイルス蛋白質 / 細胞膜 / ウイルス / HIV / 感染症
Outline of Final Research Achievements

HIV-1 Nef plays an essential role in enhancing virion infectivity by antagonizing the host restriction molecule SERINC5. Because Nef is highly polymorphic due to the selective forces of host cellular immunity, we hypothesized that certain immune-escape polymorphisms may impair Nef’s ability to antagonize SERINC5 and influence viral fitness in vivo. To test this, we identified 58 Nef polymorphisms that were overrepresented in HIV-infected patients in Japan sharing the same HLA genotypes. Specifically, we found that a number of the HLA-B*51:01-associated Y120F/Q125H mutations were most significantly associated with a reduced plasma viral load. A series of experiments showed that Y120F/Q125H impaired Nef’s ability to antagonize SERINC5 and associated with decreasing virion infectivity and viral replication. Our results suggest that the differential ability of Nef to counteract SERINC5 by naturally occurring immune-associated mutations was associated with the plasma viral load in vivo.

Academic Significance and Societal Importance of the Research Achievements

本研究成果によって、生体内で選択されるNef変異は、宿主因子であるSERINC5に拮抗する能力を損なうことでウイルスの感染性および複製能力を弱め、血漿ウイルス量の低下に寄与するものと示唆された。個体内でのウイルス蛋白質と宿主因子の相互機能解明は、宿主に本来備わる抗ウイルス機能の分子機序を活用した新しい治療基盤の構築につながると期待される。

Report

(4 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (13 results)

All 2020 2019 2018

All Journal Article (2 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 2 results,  Open Access: 2 results) Presentation (11 results) (of which Int'l Joint Research: 8 results)

  • [Journal Article] Impaired ability of Nef to counteract SERINC5 is associated with reduced plasma viremia in HIV-infected individuals2020

    • Author(s)
      Toyoda Mako、Kamori Doreen、Tan Toong Seng、Goebuchi Kageaki、Ohashi Jun、Carlson Jonathan、Kawana-Tachikawa Ai、Gatanaga Hiroyuki、Oka Shinichi、Pizzato Massimo、Ueno Takamasa
    • Journal Title

      Scientific Reports

      Volume: 10 Issue: 1

    • DOI

      10.1038/s41598-020-76375-w

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] An HIV-1 Nef genotype that diminishes immune control mediated by protective human leucocyte antigen alleles2020

    • Author(s)
      Mwimanzi Francis、Ngare Isaac、Toyoda Mako、Mori Masahiko、Mann Jaclyn、Ndung’u Thumbi、Goulder Phillip、Ueno Takamasa
    • Journal Title

      AIDS

      Volume: 34 Issue: 9 Pages: 1325-1330

    • DOI

      10.1097/qad.0000000000002559

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Naturally occurring non-subtype B envelope sequences show diverse range of sensitivity to SERINC5-mediated inhibition of HIV-1 infectivity2020

    • Author(s)
      Emmanuel James Nkuwi, George Peter Judicate Ndossi, Toong seng Tan, Godfrey Barabona, Mako Toyoda, Takamasa Ueno
    • Organizer
      The 2nd Joint MUHAS-KU Webinar
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Severe baseline immunosuppression is associated with higher levels of plasma inflammatory markers despite long term ART treatment in HIV infected Tanzanians2020

    • Author(s)
      Godfrey Barabona, Macdonald Mahiti, Mako Toyoda, Doreen Kamori, Salim Masoud, George Peter Judicate Ndossi, Bruno Sunguya, Eligius Lyamuya, Takamasa Ueno
    • Organizer
      The 2nd Joint MUHAS-KU Webinar
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] A single amino acid change in SERINC5 abrogates the infectivity restriction function against retroviruses including HIV-12020

    • Author(s)
      Toong seng Tan, Mako Toyoda, Massimo Pizzato, Kenzo Tokunaga, Takamasa Ueno
    • Organizer
      21st Kumamoto AIDS Seminar (ONLINE Seminar)
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Severe baseline immunosuppression is associated with higher levels of plasma inflammatory markers despite long term ART treatment in HIV infected Tanzanians2020

    • Author(s)
      Godfrey Barabona, Macdonald Mahiti, Mako Toyoda, Doreen Kamori, Salim Masoud, George Peter Judicate Ndossi, Bruno Sunguya, Eligius Lyamuya, Takamasa Ueno
    • Organizer
      21st Kumamoto AIDS Seminar (ONLINE Seminar)
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Naturally occurring non-subtype B envelope sequences show diverse range of sensitivity to SERINC5-mediated inhibition of HIV-1 infectivity2020

    • Author(s)
      Emmanuel James Nkuwi, George Peter Judicate Ndossi, Toong seng Tan, Godfrey Barabona, Mako Toyoda, Takamasa Ueno
    • Organizer
      21st Kumamoto AIDS Seminar (ONLINE Seminar)
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Naturally arising HIV-1 Nef mutations that affect counteraction of SERINC3/5 and virion infectivity.2019

    • Author(s)
      Mako Toyoda, Doreen Kamori, Massimo Pizzato, Takamasa Ueno
    • Organizer
      The 33rd Annual Meeting of the Japanese Society for AIDS Research, Kumamoto, Japan.
    • Related Report
      2019 Research-status Report
  • [Presentation] A single amino acid change in an extracellular loop of SERINC5 attenuates the ability to restrict HIV-1.2019

    • Author(s)
      Toong Seng Tan, Mako Toyoda, Takamasa Ueno.
    • Organizer
      The 33rd Annual Meeting of the Japanese Society for AIDS Research, Kumamoto, Japan.
    • Related Report
      2019 Research-status Report
  • [Presentation] Impaired Nef’s ability to counteract SERINC5 by immune-driven mutations.2019

    • Author(s)
      Mako Toyoda, Doreen Kamori, Jonathan Carlson, Ai Kawana-Tachikawa, Hiroyuki Gatanaga, Shinichi Oka, Takamasa Ueno.
    • Organizer
      The annual Conference on Retroviruses and Opportunistic Infections (CROI), Seattle, USA, March 4-7, 2019.
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Contribution of extracellular loop structures of SERINC5 in HIV-1 infectivity restriction.2018

    • Author(s)
      Toong Seng Tan, Mako Toyoda, Takamasa Ueno.
    • Organizer
      21st Summer Retrovirus Conference (SRC), Kobe, Japan. July 12-13, 2018.
    • Related Report
      2018 Research-status Report
  • [Presentation] Naturally arising HIV-1 Nef mutations that affect counteraction of SERINC3/5 and virion infectivity.2018

    • Author(s)
      Mako Toyoda, Doreen Kamori, Massimo Pizzato, Takamasa Ueno.
    • Organizer
      19th Kumamoto AIDS Seminar, Kumamoto, Japan. Nov 6-7, 2018.
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Contribution of extracellular loop structures of SERINC5 in HIV-1 infectivity restriction.2018

    • Author(s)
      Toong Seng Tan, Mako Toyoda, Takamasa Ueno.
    • Organizer
      19th Kumamoto AIDS Seminar, Kumamoto, Japan. Nov 6-7, 2018.
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research

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Published: 2018-04-23   Modified: 2022-01-27  

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