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Elucidation of the mechanism of extracellular membrane vesicle production with a novel bacterium that abundantly produces vesicles and their application

Research Project

Project/Area Number 18K19178
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Review Section Medium-sized Section 38:Agricultural chemistry and related fields
Research InstitutionKyoto University

Principal Investigator

KURIHARA Tatsuo  京都大学, 化学研究所, 教授 (70243087)

Project Period (FY) 2018-06-29 – 2021-03-31
Project Status Completed (Fiscal Year 2020)
Budget Amount *help
¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Fiscal Year 2019: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Fiscal Year 2018: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Keywords細胞外膜小胞 / タンパク質輸送 / タンパク質分泌 / 表層糖鎖 / 表層糖脂質 / 膜タンパク質
Outline of Final Research Achievements

We found that the major cargo protein of extracellular membrane vesicles of a hyper-vesiculating bacterium, Shewanella vesiculosa HM13, is transported to the extracellular space by a machinery similar to the type II protein secretion system and is loaded onto the vesicles via interaction with polysaccharides at the surface of the vesicles. We also determined the structure of the major lipooligosaccharide in the membrane vesicles. Furthermore, we identified a sensor protein homolog involved in the regulation of membrane vesicle production.

Academic Significance and Societal Importance of the Research Achievements

細菌が細胞外に分泌生産する膜小胞は、細菌間や細菌-宿主間のコミュニケーション、環境中の栄養素利用、病原性細菌の病原性発現などを担うことから、近年、大きな注目を集めている。本研究は、そのような膜小胞の生産機構の一端を明らかにした点で意義深い。また、膜小胞に任意のタンパク質を積み込むことで機能性膜小胞を作るための基盤となる知見を与えるものであり、応用面でも意義深い。

Report

(4 results)
  • 2020 Annual Research Report   Final Research Report ( PDF )
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (38 results)

All 2021 2020 2019 2018 Other

All Int'l Joint Research (4 results) Journal Article (7 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 7 results,  Open Access: 4 results) Presentation (27 results) (of which Int'l Joint Research: 5 results,  Invited: 5 results)

  • [Int'l Joint Research] University of Naples "Federico II"(イタリア)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] University of Naples “Federico II”(イタリア)

    • Related Report
      2019 Research-status Report
  • [Int'l Joint Research] University of Naples “Federico II”(イタリア)

    • Related Report
      2018 Research-status Report
  • [Int'l Joint Research] NIBRT(アイルランド)

    • Related Report
      2018 Research-status Report
  • [Journal Article] Identification of a Putative Sensor Protein Involved in Regulation of Vesicle Production by a Hypervesiculating Bacterium, Shewanella vesiculosa HM132021

    • Author(s)
      Fumiaki Yokoyama、Tomoya Imai、Wataru Aoki、Mitsuyoshi Ueda、Jun Kawamoto、Tatsuo Kurihara
    • Journal Title

      Frontiers in Microbiology

      Volume: 12 Pages: 629023-629023

    • DOI

      10.3389/fmicb.2021.629023

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Genetic characterization and functional implications of the gene cluster for selective protein transport to extracellular membrane vesicles of Shewanella vesiculosa HM132020

    • Author(s)
      Kouhei Kamasaka、Jun Kawamoto、Chen Chen、Fumiaki Yokoyama、Tomoya Imai、Takuya Ogawa、Tatsuo Kurihara
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: - Issue: 2 Pages: 525-531

    • DOI

      10.1016/j.bbrc.2020.03.125

    • Related Report
      2020 Annual Research Report 2019 Research-status Report
    • Peer Reviewed
  • [Journal Article] Detailed Structural Characterization of the Lipooligosaccharide from the Extracellular Membrane Vesicles of Shewanella vesiculosa HM132020

    • Author(s)
      Di Guida Rossella、Casillo Angela、Yokoyama Fumiaki、Kawamoto Jun、Kurihara Tatsuo、Corsaro Maria Michela
    • Journal Title

      Marine Drugs

      Volume: 18 Issue: 5 Pages: 231-231

    • DOI

      10.3390/md18050231

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Development of a Simple and Rapid Method for In Situ Vesicle Detection in Cultured Media2020

    • Author(s)
      Kawano Kenichi、Yokoyama Fumiaki、Kawamoto Jun、Ogawa Takuya、Kurihara Tatsuo、Futaki Shiroh
    • Journal Title

      Journal of Molecular Biology

      Volume: 432 Issue: 22 Pages: 5876-5888

    • DOI

      10.1016/j.jmb.2020.09.009

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Isolation of a novel bacterial strain capable of producing abundant extracellular membrane vesicles carrying a single major cargo protein and analysis of its transport mechanism2020

    • Author(s)
      Chen Chen、Jun Kawamoto、Soichiro Kawai、Akihiro Tame、Chiaki Kato、Tomoya Imai、Tatsuo Kurihara
    • Journal Title

      Frontiers in Microbiology

      Volume: 10 Pages: 3001-3001

    • DOI

      10.3389/fmicb.2019.03001

    • NAID

      120006796472

    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Development of a regulatable low-temperature protein expression system using the psychrotrophic bacterium, Shewanella livingstonensis Ac10, as the host2019

    • Author(s)
      Soichiro Kawai、Jun Kawamoto、Takuya Ogawa、Tatsuo Kurihara
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 83 Issue: 11 Pages: 2153-2162

    • DOI

      10.1080/09168451.2019.1638754

    • NAID

      120006764462

    • Related Report
      2019 Research-status Report
    • Peer Reviewed
  • [Journal Article] Structural Elucidation of a Novel Lipooligosaccharide from the Cold-Adapted Bacterium OMVs Producer Shewanella sp. HM132019

    • Author(s)
      Casillo Angela、Di Guida Rossella、Carillo Sara、Chen Chen、Kamasaka Kouhei、Kawamoto Jun、Kurihara Tatsuo、Corsaro Maria Michela
    • Journal Title

      Marine Drugs

      Volume: 17 Issue: 1 Pages: 34-34

    • DOI

      10.3390/md17010034

    • Related Report
      2018 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] 膜小胞高生産性細菌 Shewanella vesiculosa HM13 における細胞外膜小胞生産の分子基盤2021

    • Author(s)
      栗原達夫
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 細胞外膜小胞へのタンパク質輸送における Wzx フリッパーゼホモログの機能2020

    • Author(s)
      釜阪紘平、川本純、小川拓哉、栗原達夫
    • Organizer
      第93回日本生化学会大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 低温菌 Shewanella vesiculosa HM13 における膜小胞生産への膜リン脂質の関与2020

    • Author(s)
      中野咲梨、小川拓哉、川本純、栗原達夫
    • Organizer
      第21回極限環境生物学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Shewanella vesiculosa HM13 の表層糖鎖合成酵素による細胞外膜小胞構造と積荷タンパク質輸送の制御2020

    • Author(s)
      都築大空、釡阪紘平、Liu Yuying、今井友也、川本純、小川拓哉、栗原達夫
    • Organizer
      第21回極限環境生物学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 細菌の細胞外膜小胞へのタンパク質輸送機構2020

    • Author(s)
      栗原達夫
    • Organizer
      令和2年度日本農芸化学会東北支部シンポジウム
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Mechanistic analysis of protein transport to extracellular membrane vesicles of a hypervesiculating bacterial strain, Shewanella vesiculosa HM132020

    • Author(s)
      Tatsuo Kurihara
    • Organizer
      ASEMV2020 (Annual meeting of the American Society for Exosomes and Microvesicles)
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Regulation of vesiculation and biofilm dispersion of Shewanella vesiculosa HM13 in response to extracellular environment2020

    • Author(s)
      Fumiaki Yokoyama、Tomoya Imai、Jun Kawamoto、Takuya Ogawa、Tatsuo Kurihara
    • Organizer
      3rd Bacterial Cell Biology Conference
    • Related Report
      2019 Research-status Report
    • Int'l Joint Research
  • [Presentation] 菌体外膜小胞へのタンパク質輸送における細胞表層構造制御タンパク質の機能2020

    • Author(s)
      釜阪紘平、陳晨、川本純、小川拓哉、栗原達夫
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Research-status Report
  • [Presentation] 細菌のセンサータンパク質によるベシクル生産とバイオフィルム分散の誘導2020

    • Author(s)
      横山文秋、今井友也、川本純、小川拓哉、栗原達夫
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Research-status Report
  • [Presentation] 膜小胞高生産性細菌におけるタンパク質の膜小胞への輸送機構2020

    • Author(s)
      栗原達夫
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Research-status Report
    • Invited
  • [Presentation] バイオフィルム分散に関与するセンサータンパク質のホモログを介した細菌ベシクル生産制御2019

    • Author(s)
      横山文秋、川本純、今井友也、小川拓哉、栗原達夫
    • Organizer
      第66回日本生化学会近畿支部例会
    • Related Report
      2019 Research-status Report
  • [Presentation] Shewanella sp. HM13 における菌体外膜小胞を介したタンパク質分泌機構における細胞表層構造の働き2019

    • Author(s)
      釜阪紘平、Chen Chen、Liu Yuying、川本純、小川拓哉、栗原達夫
    • Organizer
      第66回日本生化学会近畿支部例会
    • Related Report
      2019 Research-status Report
  • [Presentation] バイオフィルム分散関連タンパク質BdlAホモログの細菌ベシクル中からの同定2019

    • Author(s)
      横山文秋、川本純、小川拓哉、今井友也、栗原達夫
    • Organizer
      第33回バイオフィルム学会学術集会
    • Related Report
      2019 Research-status Report
  • [Presentation] 細菌生体膜機能発現の分子基盤: 膜リン脂質・膜小胞研究の新展開2019

    • Author(s)
      栗原達夫
    • Organizer
      第33回ケミカルバイオロジー研究所セミナー/第105回生物科学フロンティアセミナー
    • Related Report
      2019 Research-status Report
    • Invited
  • [Presentation] 細菌の菌体外膜小胞を介した選択的タンパク質分泌における細胞表層構造の役割2019

    • Author(s)
      釜阪紘平、Chen Chen、小川拓哉、川本純、栗原達夫
    • Organizer
      第92回日本生化学会大会
    • Related Report
      2019 Research-status Report
  • [Presentation] 細菌の細胞外膜小胞へのタンパク質積み込みにおける膜表層構造の機能2019

    • Author(s)
      釜阪紘平、陳晨、川本純、小川拓哉、栗原達夫
    • Organizer
      第20回極限環境生物学会年会
    • Related Report
      2019 Research-status Report
  • [Presentation] 低温菌 Shewanella vesiculosa HM13 のセンサータンパク質によるベシクル生産およびバイオフィルム分散の制御2019

    • Author(s)
      横山文秋、今井友也、川本純、小川拓哉、栗原達夫
    • Organizer
      第20回極限環境生物学会年会
    • Related Report
      2019 Research-status Report
  • [Presentation] Involvement of a putative LPS-biosynthesis enzyme in the vesicle-mediated protein secretion of Shewanella sp. HM132019

    • Author(s)
      Liu Yuing、Chen Chen、Kawamoto Jun、Ogawa Takuya、Kurihara Tatsuo
    • Organizer
      日本農芸化学会2019年度大会
    • Related Report
      2018 Research-status Report
  • [Presentation] Shewanella sp. HM13 の細胞外膜小胞への積荷輸送における膜表層構造の役割2019

    • Author(s)
      釜阪紘平、陳晨、榑林俊樹、川本純、小川拓哉、栗原達夫
    • Organizer
      日本農芸化学会2019年度大会
    • Related Report
      2018 Research-status Report
  • [Presentation] Secretory production of heterologous proteins as cargoes of membrane vesicles by using a cold-adapted bacterium, Shewanella sp. HM132019

    • Author(s)
      Chen Chen、Kawai Soichiro、Kwamoto Jun、Imai Tomoya、Kurihara Tatsuo
    • Organizer
      日本農芸化学会2019年度大会
    • Related Report
      2018 Research-status Report
  • [Presentation] 細胞外環境に応答した推定センサータンパク質を介する細菌のベシクル生産制御2019

    • Author(s)
      横山文秋、川本純、陳晨、今井友也、栗原達夫
    • Organizer
      日本農芸化学会2019年度大会
    • Related Report
      2018 Research-status Report
  • [Presentation] Identification of a protein that presumably controls bacterial vesiculation in response to the extracellular environments2019

    • Author(s)
      Yokoyama Fumiaki、Kawamoto Jun、Chen Chen、Imai Tomoya、Kurihara Tatsuo
    • Organizer
      8th Congress of the International Society for Extracellular Vesicles (ISEV2019)
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Extracellular membrane vesicles of Shewanella sp. HM13: analysis of their cargo loading mechanism2018

    • Author(s)
      Kurihara Tatsuo、Kawamoto Jun、Ogawa Takuya、Imai Tomoya、Chen Chen、Yokoyama Fumiaki、Kamasaka Kohei
    • Organizer
      12th International Congress of Extremophiles
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] Methyl-accepting chemotaxis protein is related to vesicle production in a poor nutrient environment2018

    • Author(s)
      Yokoyama Fumiaki、Kawamoto Jun、Chen Chen、Imai Tomoya、Kurihara Tatsuo
    • Organizer
      12th International Congress of Extremophiles
    • Related Report
      2018 Research-status Report
    • Int'l Joint Research
  • [Presentation] 貧栄養条件下における細菌細胞外ベシクル生産に関わるメチル受容走化性タンパク質ホモログの同定2018

    • Author(s)
      横山文秋、川本純、陳晨、今井友也、栗原達夫
    • Organizer
      第91回日本生化学会大会
    • Related Report
      2018 Research-status Report
  • [Presentation] Heterologous protein secretion via membrane vesiculation by a cold-adapted bacterium, Shewanella sp. HM132018

    • Author(s)
      陳晨、河合総一郎、川本純、今井友也、栗原達夫
    • Organizer
      第91回日本生化学会大会
    • Related Report
      2018 Research-status Report
  • [Presentation] Shewanella sp. HM13 の膜小胞を介した選択的タンパク質分泌関連遺伝子の生理機能解明2018

    • Author(s)
      釜阪紘平、陳晨、横山文秋、今井友也、川本純、栗原達夫
    • Organizer
      第19回極限環境生物学会年会
    • Related Report
      2018 Research-status Report

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Published: 2018-07-25   Modified: 2022-01-27  

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