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Mechanism by which plants in autumn sense the winter coming through noisy changes in air temperature

Research Project

Project/Area Number 18K19319
Research Category

Grant-in-Aid for Challenging Research (Exploratory)

Allocation TypeMulti-year Fund
Review Section Medium-sized Section 44:Biology at cellular to organismal levels, and related fields
Research InstitutionIwate University

Principal Investigator

Kawamura Yukio  岩手大学, 農学部, 准教授 (10400186)

Project Period (FY) 2018-06-29 – 2022-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Fiscal Year 2019: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2018: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Keywords低温馴化 / 植物 / 冬季感知 / 温度ノイズ / 季節情報 / 機械学習 / 重回帰分析
Outline of Final Research Achievements

Studies on the molecular mechanisms of cold acclimation in plants have been carried out in simple artificial environments, so the mechanisms of seasonal sensing in the field remain completely unknown. In this study, changes in freezing tolerance in the field and weather data were combined and analyzed by machine learning. As a result, it was suggested that in field cold acclimation, plants may mainly use temperature change, not photoperiod, for the control of cold acclimation. RNA-seq analysis revealed the possibility of a characteristic control of acclimation in each temperature range. On the other hand, an experiment using growth chamber which simulated the average temperature change from autumn to winter suggested that the control of cold acclimation by day length through phytochrome occurred only in the mid-winter after December.

Academic Significance and Societal Importance of the Research Achievements

本研究では、野外データと気象データを組み合わせ、また、機械学習も導入することにより、植物は温度に対し鋭敏に対応し、温度域により低温馴化制御のメカニズムが異なることが明らかに出来た。野外実験では気象データを含む膨大なデータが生じるが、機械学習を用いることにより生理学的データと結びつけられ、生理変化をもたらす野外環境の因子を特定できる可能性を示せたことは、本研究の大きな成果であった。また、これまで日長や光質の季節変化も植物の冬季感知に用いられている可能性が指摘されていたが、野外実験や野外を再現した人工気象器を用いた実験により、これらの可能性が低いことが示せたことも学術的な意義が高いと考える。

Report

(5 results)
  • 2021 Annual Research Report   Final Research Report ( PDF )
  • 2020 Research-status Report
  • 2019 Research-status Report
  • 2018 Research-status Report
  • Research Products

    (8 results)

All 2021 2020 2019 2018

All Journal Article (3 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 3 results) Presentation (5 results)

  • [Journal Article] Season specificity in the cold‐induced calcium signal and the volatile chemicals in the atmosphere2019

    • Author(s)
      Hiraki Hayato、Watanabe Manabu、Uemura Matsuo、Kawamura Yukio
    • Journal Title

      Physiologia Plantarum

      Volume: 168 Issue: 4 Pages: 803-818

    • DOI

      10.1111/ppl.13019

    • Related Report
      2019 Research-status Report
    • Peer Reviewed
  • [Journal Article] Effect of Temperature Fluctuating Cyclic Cold Acclimation on Freezing Tolerance in Three Arabidopsis Accessions2019

    • Author(s)
      HIRAKI, H., TANINO, K., WATANABE, E., MANO, S., UEMURA, M., and KAWAMURA, Y.
    • Journal Title

      Cryobiology and Cryotechnology

      Volume: 65 Issue: 1 Pages: 17-22

    • DOI

      10.20585/cryobolcryotechnol.65.1_17

    • NAID

      130007700253

    • ISSN
      1340-7902, 2424-1555
    • Related Report
      2019 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Calcium Signaling-Linked CBF/DREB1 Gene Expression was Induced Depending on the Temperature Fluctuation in the Field: Views from the Natural Condition of Cold Acclimation2018

    • Author(s)
      Hiraki Hayato、Uemura Matsuo、Kawamura Yukio
    • Journal Title

      Plant and Cell Physiology

      Volume: 60 Issue: 2 Pages: 303-317

    • DOI

      10.1093/pcp/pcy210

    • Related Report
      2018 Research-status Report
    • Peer Reviewed
  • [Presentation] 野外でのシロイヌナズナの凍結耐性の季節的変遷と機械学習によるその予測2021

    • Author(s)
      河村幸男、上村松生
    • Organizer
      日本植物学会第85回大会(東京(オンライン大会))
    • Related Report
      2021 Annual Research Report
  • [Presentation] フィトクロムを介した日長および温度による低温誘導性遺伝子の発現制御とその解析2021

    • Author(s)
      笠松勇登、上村松生、河村幸男
    • Organizer
      東北植物学会第11回大会(福島)
    • Related Report
      2021 Annual Research Report
  • [Presentation] 光を介した低温馴化プロセスにおけるクリプトクロムの役割2021

    • Author(s)
      下平基、高橋亜未、上村松生、河村幸男
    • Organizer
      東北植物学会第11回大会(福島)
    • Related Report
      2021 Annual Research Report
  • [Presentation] 植物の冬の感知と秋から冬にかけての気温と日長の特徴的な変化2020

    • Author(s)
      河村幸男、上村松生
    • Organizer
      第61回日本植物生理学会年会
    • Related Report
      2020 Research-status Report
  • [Presentation] Plant winter sensing and characteristic changes in air temperature and day length from autumn to winter2020

    • Author(s)
      河村 幸男, 上村 松生
    • Organizer
      第61回日本植物生理学会年会
    • Related Report
      2019 Research-status Report

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Published: 2018-07-25   Modified: 2023-01-30  

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