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Feasible study of a phenome analysis using chemicals and a high throughput screening system in Arabidopsis

Research Project

Project/Area Number 19510206
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied genomics
Research InstitutionThe Institute of Physical and Chemical Research

Principal Investigator

KUROMORI Takashi  The Institute of Physical and Chemical Research, 機能開発研究グループ, 研究員 (80332295)

Co-Investigator(Kenkyū-buntansha) 能年 義輝  独立行政法人理化学研究所, 植物免疫研究チーム, 研究員 (70332278)
明賀 史純  独立行政法人理化学研究所, 機能開発研究グループ, 研究員 (10342859)
Co-Investigator(Renkei-kenkyūsha) NOUTOSHI Yoshiteru  独立行政法人理化学研究所, 植物免疫研究チーム, 客員研究員 (70332278)
MYOUGA Fumiyoshi  独立行政法人理化学研究所, 機能開発研究グループ, 研究員 (10342859)
Project Period (FY) 2007 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2010: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2009: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2008: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2007: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywords植物 / シロイヌナズナ / ゲノム / フェノーム
Research Abstract

Conditional phenotypes are mutant phenotypes which can be detected under some stress treatment or environmental conditions. We developed a high throughput assay system to detect the conditional phenotypes for many tagging lines quickly using multi-titer plates. According to image scanning, we could calculate the green parts of each well that is indicating the growth status. By this detection system, we could find a novel ABA hypersensitive mutant.

Report

(6 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report   Self-evaluation Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (107 results)

All 2011 2010 2009 2008 2007 Other

All Journal Article (40 results) (of which Peer Reviewed: 38 results) Presentation (54 results) Book (4 results) Remarks (5 results) Patent(Industrial Property Rights) (4 results) (of which Overseas: 2 results)

  • [Journal Article] Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana.2011

    • Author(s)
      Kuromori T
    • Journal Title

      Mol.Biol.Evol. 28

      Pages: 377-382

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana.2011

    • Author(s)
      Hanada K.
    • Journal Title

      Mol.Biol.Evol.

      Volume: 28 Pages: 377-382

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] ABA transport factors found in Arabidopsis ABC transporters.2010

    • Author(s)
      Kuromori T, Shinozaki K.
    • Journal Title

      Plant Signal Behav. 5

      Pages: 1124-1126

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Molecular basis of the core regulatory network in abscisic acid responses: sensing, signaling, and transport.2010

    • Author(s)
      Umezawa T, Nakashima K, Miyakawa T, Kuromori T, Tanokura M, Shinozak K, Yamaguchi-Shinozaki K.
    • Journal Title

      Plant Cell Physiol. 51

      Pages: 1821-1839

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Phenome analysis of root development in Arabidopsis.2010

    • Author(s)
      Yuguchi M, Yokouchi T, Tominaga-Wada R, Kuromori T, Shinozaki K, Okada K, Wada T.
    • Journal Title

      Plant Biotech. 27

      Pages: 345-347

    • NAID

      10026706084

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Toward genome-wide metabolotyping and elucidation of metabolicsystem : metabolic profiling of large-scale bioresources.2010

    • Author(s)
      Kuromori T
    • Journal Title

      J.Plant Res. 123

      Pages: 291-298

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] ABC transporter AtABCG25 is involved in abscisic acid transport and responses.2010

    • Author(s)
      Kuromori T, Miyaji T, Yabuuchi H, Shimizu H, Sugimoto E, Kamiya A, Moriyama Y, Shinozaki K.
    • Journal Title

      Proc.Natl Acad.Sci.USA 107

      Pages: 2361-2366

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] T-DNA-tagged homozygous lines for nuclear-encoded chloroplast proteins and their systematic phenotype analysis.2010

    • Author(s)
      Kuromori T
    • Journal Title

      Plant J. 61

      Pages: 529-542

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] ABA transport factors found in Arabidopsis ABC transporters.2010

    • Author(s)
      Kuromori T.
    • Journal Title

      Plant Signal Behav.

      Volume: 5 Pages: 1124-1126

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Toward genome-wide metabolotyping and elucidation of metabolicsystem : metabolic profiling of large-scale bioresources.2010

    • Author(s)
      Hirai MY.
    • Journal Title

      J.Plant Res.

      Volume: 123 Pages: 291-298

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Phenome analysis of root development in Arabidopsis.2010

    • Author(s)
      Yuguchi M.
    • Journal Title

      Plant Biotech.

      Volume: 27 Pages: 345-347

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular basis of the core regulatory network in abscisic acid responses : sensing, signaling, and transport.2010

    • Author(s)
      Umezawa T.
    • Journal Title

      Plant Cell Physiol.

      Volume: 51 Pages: 1821-1839

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] ABC transporter AtABCG25 is involved in abscisic acid transport and responses2010

    • Author(s)
      Kuromori T, Miyaji T, Yabuuchi H, Shimizu H, Sugimoto E, Kamiya A, Moriyama Y, Shinozaki K.
    • Journal Title

      Proc.Natl Acad.Sci.USA 107

      Pages: 2361-2366

    • Related Report
      2009 Self-evaluation Report
    • Peer Reviewed
  • [Journal Article] ABC transporter AtABCG25 is involved in abscisic acid transport and responses2010

    • Author(s)
      Kuromori T.
    • Journal Title

      Proc.Natl Acad.Sci.USA 107

      Pages: 2361-2366

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Chloroplast Function Database : a large-scale collection of Arabidopsis Ds/Spm- or T-DNA-tagged homozygous lines for nuclear-encoded chloroplast proteins and their systematic phenotype analysis2010

    • Author(s)
      Myouga F.
    • Journal Title

      Plant J. 61

      Pages: 529-542

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article]2010

    • Author(s)
      Kuromori T.
    • Journal Title

      The Handbook of Plant Mutation Screening : Mining of Natural and Induce Alleles(WILEY-VCH Verlag GmbH & Co.KGaA, Weinheim)

      Pages: 17-30

    • Related Report
      2009 Annual Research Report
  • [Journal Article] Increased expression and protein divergence in duplicate genes is associated with morphological diversification.2009

    • Author(s)
      Hanada K, Kuromori T, Myoga F, Toyoda T, Shinozaki K
    • Journal Title

      PLoS Genet. 5

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Evolutionary persistence of functional compensation by duplicate genes in Arabidopsis.2009

    • Author(s)
      Hanada K, Kuromori T, Myoga F, Toyoda T, Li WH, Shinozaki K
    • Journal Title

      Gen.Biol.Evol. 2009

      Pages: 409-414

    • NAID

      130006991253

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Phenome analysis in plant species using loss-of-function and gain-of-function mutants.2009

    • Author(s)
      Kuromori T, Takahashi S, Kondou Y, Shinozaki K, Matsui M
    • Journal Title

      Plant Cell Physiol. 50

      Pages: 1215-1231

    • NAID

      10027341294

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] PosMed-plus : an intelligent search engine that inferentially integrates cross-species information resources for molecular breeding of plants.2009

    • Author(s)
      Kuromori T
    • Journal Title

      Plant Cell Physiol. 50

      Pages: 1249-1259

    • NAID

      10027341539

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] MS/MS spectral tag (MS2T)-based annotation of non-targeted profile of plant secondary metabolites.2009

    • Author(s)
      Matsuda F, Yonekura-S.K, Niida R, Kuromori T, Shinozaki K, Saito K
    • Journal Title

      Plant J. 57

      Pages: 555-577

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Phenome analysis in plant species using loss-of-function and gain-of-function mutants2009

    • Author(s)
      Kuromori T, Takahashi S, Kondou Y, Shinozaki K, Matsui M.
    • Journal Title

      Plant Cell Physiol. 50

      Pages: 1215-1231

    • NAID

      10027341294

    • Related Report
      2009 Self-evaluation Report
    • Peer Reviewed
  • [Journal Article] Increased expression and protein divergence in duplicate genes is associated with morphological diversification2009

    • Author(s)
      Hanada K.
    • Journal Title

      PLoS Genet. 5

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evolutionary persistence of functional compensation by duplicate genes in Arabidopsis2009

    • Author(s)
      Hanada K.
    • Journal Title

      Gen.Biol.Evol. 2009

      Pages: 409-414

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Phenome analysis in plant species using loss-of-function and gain-of-function mutants2009

    • Author(s)
      Kuromori T.
    • Journal Title

      Plant Cell Physiol 50

      Pages: 1215-1231

    • NAID

      10027341294

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] PosMed-plus : an intelligent search engine that inferentially integrates cross-species information resources for molecular breeding of plants2009

    • Author(s)
      Makita Y.
    • Journal Title

      Plant Cell Physiol 50

      Pages: 1249-1259

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article]2009

    • Author(s)
      Kuromori T.
    • Journal Title

      Induced Plant Mutations in the Genomics Era(Food and Agriculture Organization of the United Nations, Rome)

      Pages: 131-133

    • Related Report
      2009 Annual Research Report
  • [Journal Article] MS/MS spectral tag (MS2T)-based annotation of non-targeted profile of plant secondary metabolites2009

    • Author(s)
      Matsuda F.
    • Journal Title

      Plant J. 57

      Pages: 555-577

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Homologous chromosome pairing is completed in crossover defective atzip4 mutant.2008

    • Author(s)
      Kuromori T, Azumi Y, Hayakawa S, Kamiya A, Imura Y, Wada T, Shinozaki K
    • Journal Title

      Biochem.Biophys.Res.Commun. 370

      Pages: 98-103

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] The novel glycerophosphoryl diester phosphodiesterase-like proteins SHV3 and SVLs are pivotal players in cell wall organization.2008

    • Author(s)
      Hayashi S, Ishii T, Matsunaga T, Tominaga R, Kuromori T, Wada T, Shinozaki K, Hirayama T
    • Journal Title

      Plant Cell Physiol. 49

      Pages: 1522-1535

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] A heterocomplex of iron superoxide dismutases defends chloroplast nucleoids against oxidative stress and is essential for chloroplast development in Arabidopsis.2008

    • Author(s)
      Kuromori T
    • Journal Title

      Plant Cell. 20

      Pages: 3148-3162

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Homologous chromosome pairing is completed in crossover defective atzip4 mutant2008

    • Author(s)
      Kuromori T.
    • Journal Title

      Biochem. Biophys. Res. Commun. 370

      Pages: 98-103

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The glycerophosphoryl diester phosphodiesterase-like proteins SHV3 and its homologs play important roles in cell wall organization2008

    • Author(s)
      Hayashi S.
    • Journal Title

      Plant Cell Physiol. 49

      Pages: 1522-1535

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A heterocomplex of iron superoxide dismutases defends chloroplast nucleoids against oxidative stress and is essential for chloroplast development in Arabidopsis2008

    • Author(s)
      Myouga F.
    • Journal Title

      Plant Cell 20

      Pages: 3148-3162

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cytological and Biochemical Analysis of COF1, an Arabidopsis Mutant of an ABC Transporter Gene.2007

    • Author(s)
      Ukitsu H, Kuromori T, Toyooka K, Goto Y, Matsuoka K, Sakuradani E, Shimizu S, Kamiya A, Imura Y, Yuguchi M, Wada T, Hirayama T, Shinozaki K
    • Journal Title

      Plant Cell Physiol. 48

      Pages: 1524-1533

    • NAID

      10027005334

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Top-down phenomics of Arabidopsis thaliana - metabolic profiling by one- and two-dimensional nuclear magnetic resonance SPECTROSCOPY and transcriptome analysis of albino mutants.2007

    • Author(s)
      Tian C, Chikayama E, Tsuboi Y, Kuromori T, Shinozaki K, Kikuchi J, Hirayama T
    • Journal Title

      J.Biol.Chem. 282

      Pages: 18532-18541

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Multiple loss-of-function of Arabidopsis gibberellin receptor AtGID1s completely shuts down a gibberellin signal.2007

    • Author(s)
      Kuromori T
    • Journal Title

      Plant J. 50

      Pages: 958-966

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cytological and Biochemical Analysis of COF1, an Arabidopsis Mutant of an ABC Transporter Gene2007

    • Author(s)
      Ukitsu H
    • Journal Title

      Plant Cell Physiol. 48

      Pages: 1524-1533

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Top-down phenomics of Arabidopsis thaliana-metabolic prohling by one-and two-dimensional nuclear magnetic resonance SPECTROSCOPY and transcriptome analysis of albino mutants2007

    • Author(s)
      Tian C
    • Journal Title

      J. Biol. Chem 282

      Pages: 18532-18541

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Multiple loss-of-function of Arabidopsis gibberellin receptor AtGID1s completely shuts down a gibberellin signal2007

    • Author(s)
      Iuchi S
    • Journal Title

      Plant J. 50

      Pages: 958-966

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Presentation] Regulatory gene network in early responses to drought stress.2011

    • Author(s)
      Shinozaki K
    • Organizer
      Plant Abiotic Stress Tolerance Mechanisms, Water and Global Agriculture (Keystone Symposia)
    • Place of Presentation
      Colorado, USA
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] ミトコンドリアに局在するトランスロケーターの欠損における細胞内ATP量の減少は、核相の変動を介した生育に影響を与える2011

    • Author(s)
      濱崎英史
    • Organizer
      第52回日本植物生理学会年会
    • Place of Presentation
      仙台
    • Related Report
      2010 Annual Research Report
  • [Presentation] Development of a database focusing phenome of Arabidopsis thaliana on RIKEN SciNeS.2010

    • Author(s)
      Doi K
    • Organizer
      第33回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] ABA transport and the functional factors found in Arabidopsis ABC transporters.2010

    • Author(s)
      Kuromori T
    • Organizer
      From Plant Biology to Crop Biotechnology (2010 Cold Spring Harbor Asia Conference)
    • Place of Presentation
      Suzhou, China
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] AtABCG25 is an ABC transporter involved in abscisic acid transport and response.2010

    • Author(s)
      Shinozaki K
    • Organizer
      Plant Biology 2010
    • Place of Presentation
      Montreal, Canada
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] Arabidopsis AtABCG25 is an ABC transporter involved in ABA transport and responses.2010

    • Author(s)
      Kuromori T
    • Organizer
      20th International Conference on Plant Growth Substances (IPGSA)
    • Place of Presentation
      Tarragona, Spain
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] ABC transporter AtABCG25 involved in ABA transport and responses.2010

    • Author(s)
      Kuromori T
    • Organizer
      International Conference on Arabidopsis Research (ICAR 2010)
    • Place of Presentation
      Yokohama, Japan
    • Related Report
      2010 Final Research Report
  • [Presentation] RIKEN SciNes : A semantic-web database integrating phenome of Arabidopsis thaliana.2010

    • Author(s)
      Doi K
    • Organizer
      International Conference on Arabidopsis Research (ICAR 2010)
    • Place of Presentation
      Yokohama, Japan
    • Related Report
      2010 Final Research Report
  • [Presentation] ABC transporter AtABCG25 involved in ABA transport and responses.2010

    • Author(s)
      Kuromori T.
    • Organizer
      21st International Conference on Arabidopsis Research (ICAR)
    • Place of Presentation
      Yokohama, Japan
    • Related Report
      2010 Annual Research Report
  • [Presentation] RIKEN SciNes : A semantic-web database integrating phenome of Arabidopsis thaliana.2010

    • Author(s)
      Doi K.
    • Organizer
      21st International Conference on Arabidopsis Research (ICAR)
    • Place of Presentation
      Yokohama, Japan
    • Related Report
      2010 Annual Research Report
  • [Presentation] Molecular dissection of CLV3 signalling.2010

    • Author(s)
      Betsuyaku S.
    • Organizer
      21st International Conference on Arabidopsis Research (ICAR)
    • Place of Presentation
      Yokohama, Japan
    • Related Report
      2010 Annual Research Report
  • [Presentation] Identification of two novel genes affecting the control of the floral transition in Arabidopsis thaliana.2010

    • Author(s)
      Robvieux F.
    • Organizer
      21st International Conference on Arabidopsis Research (ICAR)
    • Place of Presentation
      Yokohama, Japan
    • Related Report
      2010 Annual Research Report
  • [Presentation] Transcriptome coexpression analysis led to identification of a novel anthocyanin glycosyltransferase gene in Arabidopsis.2010

    • Author(s)
      Yonekura-Sakakibara K.
    • Organizer
      21st International Conference on Arabidopsis Research (ICAR)
    • Place of Presentation
      Yokohama, Japan
    • Related Report
      2010 Annual Research Report
  • [Presentation] シロイヌナズナの葉緑体形成とストレス応答に関わる核コード葉緑体タンパク質のタグラインの単離と同定2010

    • Author(s)
      明賀史純
    • Organizer
      第51回日本植物生理学会年会
    • Place of Presentation
      熊本市、熊本大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] シロイヌナズナの開花時における雄しべと花弁の同調した発達に異常がみられる defective coordination1突然変異体の分子遺伝学的解析2010

    • Author(s)
      田畑亮
    • Organizer
      第51回日本植物生理学会年会
    • Place of Presentation
      熊本市、熊本大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] Evolutionary Persistence of Functional Compensation by Duplicate Genes in Arabidopsis2010

    • Author(s)
      花田耕介
    • Organizer
      第51回日本植物生理学会年会
    • Place of Presentation
      熊本市、熊本大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] ミトコンドリアタンパク質TIM21の欠損はエンドリデュプリケーションの抑制を引き起こす2010

    • Author(s)
      濱崎英史
    • Organizer
      第51回日本植物生理学会年会
    • Place of Presentation
      熊本市、熊本大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] CLV3シグナリングの分子機構の解析2010

    • Author(s)
      別役重之
    • Organizer
      第51回日本植物生理学会年会
    • Place of Presentation
      熊本市、熊本大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] Characterization of two novel genes involved in the control of the flowering time in Arabidopsis thaliana2010

    • Author(s)
      Robvieux Florent
    • Organizer
      第51回日本植物生理学会年会
    • Place of Presentation
      熊本市、熊本大学
    • Related Report
      2009 Annual Research Report
  • [Presentation] 代謝物共蓄積メカニズムの解明に向けたバイオインフォマティクス要素技術の研究開発2009

    • Author(s)
      金谷重彦
    • Organizer
      第2回代謝領域公開シンポジウム
    • Place of Presentation
      東京、日本科学未来館
    • Year and Date
      2009-10-16
    • Related Report
      2009 Annual Research Report
  • [Presentation] セマンティックウェブを利用したシロイヌナズナの表現型および関連情報の統合の試み2009

    • Author(s)
      Doi K
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Related Report
      2010 Final Research Report
  • [Presentation] PosMed-plus : An information system making the utmost use of Arabidopsis knowledge to assist molecular breeding of crops.2009

    • Author(s)
      Makita Y
    • Organizer
      International Conference on Arabidopsis Research (ICAR 2009)
    • Place of Presentation
      Edinburgh, UK
    • Related Report
      2010 Final Research Report
  • [Presentation] A database of a large-scale mutant collection and phenotype analysis for nuclear-encoded chloroplast proteins2009

    • Author(s)
      明賀史純
    • Organizer
      20th International Conference on Arabidopsis Research
    • Place of Presentation
      Edinburgh, UK
    • Related Report
      2009 Annual Research Report
  • [Presentation] SD5, a homologue of spliceosome subunit, regulates proliferation in post-seedling development2009

    • Author(s)
      Yoshizumi T.
    • Organizer
      20th International Conference on Arabidopsis Research
    • Place of Presentation
      Edinburgh, UK
    • Related Report
      2009 Annual Research Report
  • [Presentation] RARGE : A web database of Arabidopsis resources2009

    • Author(s)
      Akiyama K.
    • Organizer
      20th International Conference on Arabidopsis Research
    • Place of Presentation
      Edinburgh, UK
    • Related Report
      2009 Annual Research Report
  • [Presentation] PosMed-plus : An information system making the utmost use of Arabidopsis knowledge to assist molecular breeding of crops2009

    • Author(s)
      蒔田由布子
    • Organizer
      20th International Conference on Arabidopsis Research
    • Place of Presentation
      Edinburgh, UK
    • Related Report
      2009 Annual Research Report
  • [Presentation] Functional Identification of a Novel Anthocyanin Glycosyltransferase Gene in Arabidopsis by Transcriptome Coexpression Analysis2009

    • Author(s)
      Yonekura-Sakakibara K.
    • Organizer
      5th international workshop on anthocyanin 2009
    • Place of Presentation
      Nagoya, Japan
    • Related Report
      2009 Annual Research Report
  • [Presentation] セマンティックウェブを利用したシロイヌナズナの表現型および関連情報の統合の試み2009

    • Author(s)
      土井考爾
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜、パシフィコ横浜
    • Related Report
      2009 Annual Research Report
  • [Presentation] Gene discovery for chloroplast proteins involved in stress response and photosynthesis in Arabidopsis using the homozygous knockout lines2009

    • Author(s)
      明賀史純
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜、パシフィコ横浜
    • Related Report
      2009 Annual Research Report
  • [Presentation] PosMed-plus:種間情報を推論的に統合する植物分子育種のためのインテリジェントサーチエンジン2009

    • Author(s)
      蒔田由布子
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜、パシフィコ横浜
    • Related Report
      2009 Annual Research Report
  • [Presentation] 遺伝子欠損体で異なる表現型を示す重複遺伝子間の蛋白機能と発現パターンの違い2009

    • Author(s)
      花田耕介
    • Organizer
      第32回日本分子生物学会年会
    • Place of Presentation
      横浜、パシフィコ横浜
    • Related Report
      2009 Annual Research Report
  • [Presentation] A Secure Data Repository Integrating Huge Volumes of Digital Contents as a Semantic Web, Semantic Web Applications and Tools for Life Sciences2008

    • Author(s)
      Kobayashi N.
    • Organizer
      SWAT4LS Workshop
    • Place of Presentation
      Edinburgh, UK
    • Year and Date
      2008-11-28
    • Related Report
      2008 Annual Research Report
  • [Presentation] Systematic phenotype analysis of Arabidopsis Ds-tagged mutants to unravel gene functions in abitoic stress response as well as growth and development.2008

    • Author(s)
      Kuromori T
    • Organizer
      International Symposium on Induced Mutations in Plants (ISIM)
    • Place of Presentation
      Vienna, Austria
    • Related Report
      2010 Final Research Report
  • [Presentation] Systematic phenotype analysis of Arabidopsis Ds-tagged mutants to unravel gene functions in abitoic stress response as well as growth and development2008

    • Author(s)
      Kuromori T.
    • Organizer
      International Symposium on Induced Mutations in Plants (ISIM)
    • Place of Presentation
      Vienna, Austria
    • Related Report
      2009 Self-evaluation Report
  • [Presentation] Systematic phenotype analysis of Arabidopsis Ds-tagged mutants to unravel gene functions in abitoic stress response as well as growth and development2008

    • Author(s)
      Kuromori T.
    • Organizer
      FAO/IAEA International Symposium on Induced Mutations in Plants
    • Place of Presentation
      Vienna, Austria
    • Related Report
      2008 Annual Research Report
  • [Presentation] MS/MS spectral tag (MS2T) based strategy for comprehensive profiling of plant secondary metabolites using liquid chromatography-mass spectrometry2008

    • Author(s)
      Matsuda F.
    • Organizer
      Banff Conference on Plant Metabolism
    • Place of Presentation
      Banff, Canada
    • Related Report
      2008 Annual Research Report
  • [Presentation] Different level of genetic redundancy throughout duplicated genes among various phenotypes in Arabidopsis thaliana2008

    • Author(s)
      Hanada K
    • Organizer
      Annual Meeting of the Society of Molecular Biology and Evolution (SMBE)
    • Place of Presentation
      Barcelona, Spain
    • Related Report
      2008 Annual Research Report
  • [Presentation] RACE database : A database on a large-scale collection and phenotype analysis of knockout mutants for nuclear-encoded chloroplast proteins2008

    • Author(s)
      Myouga F.
    • Organizer
      19th International Conference on Arabidopsis Research
    • Place of Presentation
      Montreal, Canada
    • Related Report
      2008 Annual Research Report
  • [Presentation] Molecular dissection of CLV3 peptide signaling2008

    • Author(s)
      Betsuyaku S.
    • Organizer
      19th International Conference on Arabidopsis Research
    • Place of Presentation
      Montreal, Canada
    • Related Report
      2008 Annual Research Report
  • [Presentation] SD5, a homologue of spliosome subunit, is essential for proliferation in post-seedling development2008

    • Author(s)
      Yoshizumi T.
    • Organizer
      19th International Conference on Arabidopsis Research
    • Place of Presentation
      Montreal, Canada
    • Related Report
      2008 Annual Research Report
  • [Presentation] 大規模ターゲット代謝産物分析による植物代謝制御機構の解明2008

    • Author(s)
      澤田有司
    • Organizer
      第31回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2008 Annual Research Report
  • [Presentation] シロイヌナズナの核コード葉緑体タンパク質の遺伝子破壊型変異体データベースの作製2008

    • Author(s)
      明賀史純
    • Organizer
      第31回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2008 Annual Research Report
  • [Presentation] スプライセオソームの構成因子と相同性を持つシロイヌナズナSD5の欠損は細胞増殖の抑制を引き起こす2008

    • Author(s)
      吉積毅
    • Organizer
      第31回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2008 Annual Research Report
  • [Presentation] Molecular dissection of CLV3 peptide signalling2008

    • Author(s)
      Betsuyaku S.
    • Organizer
      第31回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2008 Annual Research Report
  • [Presentation] 変異体データベース「RIKEN Activation Tagging Line Database」、「RIKEN Arabidopsis Phenome Information Database(RAPID)」、「RIKEN FOX Line Database」2008

    • Author(s)
      近藤 陽一
    • Organizer
      第49回植物生理学会年会
    • Place of Presentation
      札幌
    • Related Report
      2007 Annual Research Report
  • [Presentation] スプライオソームの構成因子と相同性を持つSD5の欠損はシロイヌナズナの芽生えで致死性を示す2008

    • Author(s)
      本郷 洋明
    • Organizer
      第49回植物生理学会年会
    • Place of Presentation
      札幌
    • Related Report
      2007 Annual Research Report
  • [Presentation] 転写因子の遺伝子破壊株コレクションを用いた窒素栄養応答の解析-MADSボックス転写因子AGL21の役割の解明2008

    • Author(s)
      鈴木 昭徳
    • Organizer
      第49回植物生理学会年会
    • Place of Presentation
      札幌
    • Related Report
      2007 Annual Research Report
  • [Presentation] サチュレーション・ミュータジェネシスが可能なシロイヌナズナにおけるフェノーム解析2007

    • Author(s)
      黒森 崇
    • Organizer
      東京大学理学系研究科生物科学専攻第838回生物科学セミナー
    • Place of Presentation
      東京
    • Year and Date
      2007-10-10
    • Related Report
      2007 Annual Research Report
  • [Presentation] Cytological and biochemical analysis of Arabidopsis mutants of ABC transporter gene COF1/WBC11.2007

    • Author(s)
      Kuromori T
    • Organizer
      BMB2007(第30回日本分子生物学会年会・第80回日本生化学会大会 合同大会)
    • Place of Presentation
      横浜
    • Related Report
      2010 Final Research Report
  • [Presentation] A mutant-based phenome analysis and collection of mutant phenotype information.2007

    • Author(s)
      Kuromori T
    • Organizer
      International Conference on Arabidopsis Research (ICAR 2010)
    • Place of Presentation
      Beijing, China
    • Related Report
      2010 Final Research Report
  • [Presentation] A mutant-based phenome analysis and collection of mutant phenotype information2007

    • Author(s)
      Kuromori T
    • Organizer
      18th International Conference on Arabidopsis Research
    • Place of Presentation
      Beijing,China
    • Related Report
      2007 Annual Research Report
  • [Presentation] Characterization of Ds-tagged mutants for nuclear-encoded chloroplast protein involved in plastid development and oxidative stress responses2007

    • Author(s)
      Myouga F
    • Organizer
      18th International Conference on Arabidopsis Research
    • Place of Presentation
      Beijing,China
    • Related Report
      2007 Annual Research Report
  • [Presentation] Impairment in the mRNA degradation causes abnormal response to both abscisic acid and salicylic acid in Arabidopsis2007

    • Author(s)
      Hirayama T
    • Organizer
      18th International Conference on Arabidopsis Research
    • Place of Presentation
      Beijing,China
    • Related Report
      2007 Annual Research Report
  • [Presentation] Cytological and biochemical analysis of Arabidopsis mutants of ABC transporter gene COF1/WBC112007

    • Author(s)
      黒森 崇
    • Organizer
      BMB2007(第30回日本分子生物学会年会・第80回日本生化学会大会合同大会)
    • Place of Presentation
      横浜
    • Related Report
      2007 Annual Research Report
  • [Book] Dstransposon mutant lines for saturation mutagenesis of the Arabidopsis genome.(KGaA, Weinheim. Molecular Plant Biology Handbook Series, The Handbook of Plant Mutation Screening : Mining of Natural and Induced Alleles.)(Chapter 2)2010

    • Author(s)
      Kuromori T, Hirayama T
    • Publisher
      WILEY-VCH Verlag GmbH & Co.
    • Related Report
      2010 Final Research Report
  • [Book] Molecular Plant Biology Handbook Series, The Handbook of Plant Mutation Screening : Mining of Natural and Induced Alleles.(Chapter 2, Ds transposon mutant lines for saturation mutagenesis of the Arabidopsis genome)2010

    • Author(s)
      Kuromori T, Hirayama T.
    • Publisher
      WILEY-VCH Verlag GmbH & Co. KGaA
    • Related Report
      2009 Self-evaluation Report
  • [Book] Induced Plant Mutations in the Genomics Era.(Systematic phenotype analysis of Arabidopsis Ds-tagged mutants to unravel gene functions in abiotic stress response as well as growth and development.)2009

    • Author(s)
      Kuromori T, Shinozaki K
    • Publisher
      Food and Agriculture Organization of the United Nations, Rome.
    • Related Report
      2010 Final Research Report
  • [Book] Induced Plant Mutations in the Genomics Era. Systematic phenotype analysis of Arabidopsis Ds-tagged mutants to unravel gene functions in abiotic stress response as well as growth and development2009

    • Author(s)
      Kuromori T, Shinozaki K.
    • Publisher
      Food and Agriculture Organization of the United Nations, Rome.
    • Related Report
      2009 Self-evaluation Report
  • [Remarks] プレスリリース, 2010年1月19日, 乾燥耐性を誘起する植物ホルモン「アブシジン酸」の輸送因子を発見

    • URL

      http://www.riken.jp/r-world/info/release/press/2010/100119/index.html

    • Related Report
      2010 Final Research Report
  • [Remarks] ホームページ

    • URL

      http://labs.psc.riken.jp/gdrg/index.html#g_project2

    • Related Report
      2010 Final Research Report
  • [Remarks] 乾燥耐性を誘起する植物ホルモン「アブシジン酸」の輸送因子を発見

    • URL

      http://www.riken.jp/r-world/info/release/press/2010/100119/index.html

    • Related Report
      2009 Self-evaluation Report
  • [Remarks] ホームページ

    • URL

      http://labs.psc.riken.jp/gdrg/index.html#g_project2

    • Related Report
      2009 Self-evaluation Report
  • [Remarks]

    • URL

      http://labs.psc.riken.jp/gdrg/index.html#g_project2

    • Related Report
      2008 Annual Research Report
  • [Patent(Industrial Property Rights)] アブシジン酸輸送タンパク質を過剰発現する植物及びその作出方法2010

    • Inventor(s)
      黒森崇、篠崎一雄
    • Industrial Property Rights Holder
      (独)理化学研究所
    • Filing Date
      2010-12-21
    • Related Report
      2010 Final Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] アブシジン酸輸送タンパク質を過剰発現する植物及びその作出方法2010

    • Inventor(s)
      黒森崇、篠崎一雄
    • Industrial Property Rights Holder
      独立行政法人理化学研究所
    • Filing Date
      2010-12-21
    • Related Report
      2010 Annual Research Report
    • Overseas
  • [Patent(Industrial Property Rights)] アブシジン酸輸送タンパク質を過剰発現する植物及びその作出方法2009

    • Inventor(s)
      黒森崇、篠崎一雄
    • Industrial Property Rights Holder
      (独)理化学研究所
    • Filing Date
      2009-12-21
    • Related Report
      2010 Final Research Report
  • [Patent(Industrial Property Rights)] アブシジン酸輸送タンパク質を過剰発現する植物及びその作出方法2009

    • Inventor(s)
      黒森崇、篠崎一雄
    • Industrial Property Rights Holder
      (独) 理化学研究所
    • Industrial Property Number
      2009-289457
    • Filing Date
      2009-12-21
    • Related Report
      2009 Annual Research Report 2009 Self-evaluation Report

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Published: 2007-04-01   Modified: 2016-04-21  

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