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Relationship between 3D-structure and substrate specificity of phospholipase A2 from Echinoderm.

Research Project

Project/Area Number 19580230
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Fisheries chemistry
Research InstitutionHokkaido University

Principal Investigator

KISHIMURA Hideki  Hokkaido University, 大学院・水産科学研究院, 准教授 (50204855)

Co-Investigator(Kenkyū-buntansha) SEKIZAKI Haruo  北海道医療大学, 薬学部, 教授 (50094834)
TOYOTA Eiko  北海道医療大学, 薬学部, 教授 (00103200)
IYAGUCHI Daisuke  北海道医療大学, 薬学部, 講師 (00433425)
Project Period (FY) 2007 – 2009
Project Status Completed (Fiscal Year 2009)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2009: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2008: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2007: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords棘皮動物 / 酵素 / ホスホリパーゼA2 / 基質極性基特異性 / X線結晶構造解析 / 立体構造 / 魚類 / トリプシン / ボスホリパーゼA2 / X線結晶解析 / ヒトデ / リン脂質
Research Abstract

Few researches exist on the relationship between 3D-structure and function of enzyme from marine organisms. In this study, we succeeded the crystallization of anchovy (Engraulis japonica) trypsin and demonstrated its 3D-structure by X-ray crystallography. On the base of this result, we tried to reveal the structural properties of phospholipase A2 from the starfish Patiria pectinifera. The starfish phospholipase A2 is adequate enzyme for production of soybean lysolecithin which is good emulsifier on food industry. Consequently, we determined the full mRNA sequence of the starfish phospholipase A2 and developed the condition for crystallization of the enzyme.

Report

(4 results)
  • 2009 Annual Research Report   Final Research Report ( PDF )
  • 2008 Annual Research Report
  • 2007 Annual Research Report
  • Research Products

    (8 results)

All 2010 2009 2008 Other

All Journal Article (2 results) (of which Peer Reviewed: 1 results) Presentation (5 results) Remarks (1 results)

  • [Journal Article] Application of supercritical carbon dioxide for preparation of starfish phospholipase A22010

    • Author(s)
      B. -S. Chun, H. Kishimura, H. Kanzawa, S. Klomklao, S. Nalinanon, S. Benjakul, S. Ando
    • Journal Title

      Process Biochemistry

    • Related Report
      2009 Final Research Report
  • [Journal Article] Application of supercritical carbon dioxide for preparation of starfish phospholipase A2

    • Author(s)
      B.-S.Chun, H.Kishimura, H.Kanzawa, S.Klomklao, S.Nalinanon, S.Beniakul, S.Ando
    • Journal Title

      Process Biochemistry (Online publish)

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] カタクチイワシ・トリプシンの結晶化およびX線結晶構造解析2009

    • Author(s)
      菅野岳・小林淳一・岸村栄毅・居弥口大介・豊田栄子・関崎春雄・佐伯弘樹
    • Organizer
      日本水産学会秋季大会
    • Place of Presentation
      盛岡市、いわて県民情報交流センター・アイーナ
    • Year and Date
      2009-10-02
    • Related Report
      2009 Annual Research Report 2009 Final Research Report
  • [Presentation] カタクチイワシ・トリプシンの結晶化および立体構造解析2009

    • Author(s)
      菅野岳・小林淳一・岸村栄毅, 他4名
    • Organizer
      マリンバイオテクノロジー学会
    • Place of Presentation
      東京都、早稲田大学大久保キャンパス
    • Year and Date
      2009-05-24
    • Related Report
      2009 Annual Research Report
  • [Presentation] カタクチイワシ・トリプシンの結晶化および立体構造解析2009

    • Author(s)
      菅野岳・小林淳一・岸村栄毅・居弥口大介・豊田栄子・関崎春雄・佐伯弘樹
    • Organizer
      マリンバィオテクノロジー学会
    • Place of Presentation
      東京都、早稲田大学大久保キャンパス
    • Related Report
      2009 Final Research Report
  • [Presentation] カタクチイワシ・トリプシンの精製と性質およびその結晶化2008

    • Author(s)
      岸村栄毅・小林淳一・居弥口大介・豊田栄子・関崎春雄・佐伯弘樹
    • Organizer
      マリンバイオテクノロジー学会
    • Place of Presentation
      京都府、京都大学
    • Related Report
      2009 Final Research Report
  • [Presentation] カタクチイワシ・トリプシンの精製と性質およびその結晶化2008

    • Author(s)
      岸村栄毅, ら6名
    • Organizer
      マリンバイオテクノロジー学会
    • Place of Presentation
      京都大学
    • Related Report
      2008 Annual Research Report
  • [Remarks] 岸村栄毅・阿部剛大「イトマキヒトデPLA2の full mRNA sequence」(AB022278 in DDBJ)

    • Related Report
      2009 Final Research Report

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Published: 2007-04-01   Modified: 2016-04-21  

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