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Studies on regulation of matrix ion dynamics and energy metabolism by mitochondria NCX

Research Project

Project/Area Number 20390057
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field General physiology
Research InstitutionKyoto University

Principal Investigator

MATSUOKA Satoshi  Kyoto University, 医学研究科, 特定准教授 (00263096)

Co-Investigator(Kenkyū-buntansha) KIM Bongju  京都大学, 医学研究科, 研究員 (80511823)
Co-Investigator(Renkei-kenkyūsha) TAKATSUKA Kenji  京都大学, 医学研究科, 研究員 (70378701)
TAKEUCHI Ayako  京都大学, 医学研究科, 助教 (00378704)
Project Period (FY) 2008 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥19,630,000 (Direct Cost: ¥15,100,000、Indirect Cost: ¥4,530,000)
Fiscal Year 2010: ¥5,850,000 (Direct Cost: ¥4,500,000、Indirect Cost: ¥1,350,000)
Fiscal Year 2009: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2008: ¥7,280,000 (Direct Cost: ¥5,600,000、Indirect Cost: ¥1,680,000)
Keywordsミトコンドリア / シミュレーション / Na / Ca交換 / カルシウム / NCX / 心筋細胞 / Ca
Research Abstract

The aim of this study was quantitative elucidation of physiological function of mitochondria. Mitochondrial and cytoplasmic Ca dynamics were studied by using Ca-sensitive fluorescent dyes in cardiac myocytes. Based on these data and previously published data, a mathematical model of mitochondria which can well reproduce mitochondrial Ca, Na and H changes was newly developed. A comprehensive mitochondria model was accomplished by integrating the model with the metabolic model including oxidative phosphorylation and TCA cycle. It was suggested that Ca- and phosphate-dependent regulatory processes are important in keeping the balance of energy metabolites.

Report

(4 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • 2008 Annual Research Report
  • Research Products

    (40 results)

All 2011 2010 2009 2008

All Journal Article (18 results) (of which Peer Reviewed: 18 results) Presentation (22 results)

  • [Journal Article] Induction and enhancement of cardiac cell differentiation from mouse and human induced pluripotent stem cells with cyclosporin-a.2011

    • Author(s)
      Fujiwara M., et al.
    • Journal Title

      PLoS One

      Volume: 6

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Induction and enhancement of cardiac cell differentiation from mouse and human induced pluripotent stem cells with cyclosporin-a.2010

    • Author(s)
      Fujiwara M, Yan P, Otsuji TG, Narazaki G, Uosaki H, Fukushima H, Kuwahara K, Harada M, Matsuda H, Matsuoka S, Okita K, Takahashi K, Nakagawa M, Ikeda T, Sakata R, Mummery CL, Nakatsuji N, Yamanaka S, Nakao K, Yamashita JK.
    • Journal Title

      PLoS One. Vol6, No2

      Pages: 16734-16734

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Magnesium gating of cardiac gap junction channels.2010

    • Author(s)
      Matsuda H, Kurata Y, Oka C, Matsuoka S, Noma A.
    • Journal Title

      Progress in Biophysics and Molecular Biology. Vol103, No1

      Pages: 102-110

    • NAID

      120002511391

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Magnesium gating of cardiac gap junction channels.2010

    • Author(s)
      Matsuda H., et al.
    • Journal Title

      Progress in Biophysics and Molecular Biology

      Volume: 103 Pages: 102-110

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Controlled release of matrix metalloproteinase-1 plasmid DNA prevents left ventricular remodeling in chronic myocardial infarction of rats.2009

    • Author(s)
      Lin X, Jo H, Ishii TM, Fujita M, Fu M, Tambara K, Yamamoto M, Tabata Y, Komeda M, Matsuoka S.
    • Journal Title

      Circulation Journal. Vol73, No12

      Pages: 2315-2321

    • NAID

      10025938557

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Role of Mg^<2+> block of the inward rectifier K^+ current in cardiac repolarization reserve : a quantitative simulation.2009

    • Author(s)
      Ishihara K, Sarai N, Asakura K, Noma A, Matsuoka S.
    • Journal Title

      Journal of molecular and cellular cardiology. Vol47, No1

      Pages: 76-84

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Chronic partial unloading restores beta-adrenergic responsiveness and reverses receptor downregulation in failing rat hearts.2009

    • Author(s)
      Wang J, Tsukashita M, Nishina T, Marui A, Yoshikawa E, Muranaka H, Matsuoka S, Ikeda T.
    • Journal Title

      Journal of Thoracic and Cardiovascular Surgery. Vol137, No2

      Pages: 465-470

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Increased O_2 consumption in excitation-contraction coupling in hypertrophied rat heart slices related to increased Na^+-Ca^<2+>exchange activity.2009

    • Author(s)
      Shimizu J, Yamashita D, Misawa H, Tohne K, Matsuoka S, Kim B, Takeuchi A, Nakajima-Takenaka C, Takaki M.
    • Journal Title

      Journal of Physiological Sciences. Vol59, No1

      Pages: 63-74

    • NAID

      10025218212

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cyclosporin-A potently induces highly cardiogenic progenitors from embryonic stem cells.2009

    • Author(s)
      Yan P, Nagasawa A, Uosaki H, Sugimoto A, Yamamizu K, Teranishi M, Matsuda H, Matsuoka S, Ikeda T, Komeda M, Sakata R, Yamashita JK.
    • Journal Title

      Biochemical and biophysical research communications. Vol379, No1

      Pages: 115-120

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Controlled release of matrix metalloproteinase-1 plasmid DNA prevents left ventricular remodeling in chronic myocardial infarction of rats2009

    • Author(s)
      Lin X, et al.
    • Journal Title

      Circulation Journal 73

      Pages: 2315-21

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Role of Mg^<2+> block of the inward rectifier K^+ current in cardiac repolarization reserve : a quantitative simulation2009

    • Author(s)
      Ishihara K, et al.
    • Journal Title

      Journal of molecular and cellular cardiology 47

      Pages: 76-84

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Chronic partial unloading restores beta-adrenergic responsiveness and reverses receptor downregulation in failing rat hearts.2009

    • Author(s)
      Wang J
    • Journal Title

      Journal of Thoracic and Cardiovascular Surgery 137

      Pages: 465-470

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Increased O2 consumption in excitation-contraction coupling in hypertrophied rat heart slices related to increased Na^<+-> Ca2^+ exchange activity.2009

    • Author(s)
      Shimizu J
    • Journal Title

      Journal of Physiological Sciences 59

      Pages: 63-74

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cyclosporin-A, potently induces highly Gardiogenic progenitors from embryonic stem cells.2009

    • Author(s)
      Yan P
    • Journal Title

      Biochem Biophys Res Commun 379

      Pages: 115-120

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Simulation study on the activation of cardiac CaMKII delta-isoform and its regulation by phosphatases.2008

    • Author(s)
      Chiba H, Schneider NS, Matsuoka S, Noma A.
    • Journal Title

      Biophysical Journal. Vol95, No5

      Pages: 2139-2149

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] Directed and systematic differentiation of cardiovascular cells from mouse induced pluripotent stem cells.2008

    • Author(s)
      Narazaki G, Uosaki H, Teranishi M, Okita K, Kim B, Matsuoka S, Yamanaka S, Yamashita JK.
    • Journal Title

      Circulation. Vol118, No5

      Pages: 498-506

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] A Simulation study on the activation of cardiac CaMKII delta-isoform and its regulation by phosphatases.2008

    • Author(s)
      Chiba H
    • Journal Title

      Biophysical Journal 95

      Pages: 2139-2149

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Directed and systematic differentiation of cardiovascular cells from mouse induced pluripotent stem cells.2008

    • Author(s)
      Narazaki G
    • Journal Title

      Circulation. 118

      Pages: 498-506

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Presentation] Mathematical modeling Ca2+ dependent regulation of cardiac mitochondria. International Symposium2011

    • Author(s)
      Satoshi Matsuoka.
    • Organizer
      Computational Physiology of Cardiac Myocytes and Pancreatic β-cells ; Interaction between Energy Metabolism and Membrane Excitability.
    • Place of Presentation
      京都市
    • Year and Date
      2011-01-30
    • Related Report
      2010 Final Research Report
  • [Presentation] Mathematical modeling Ca^<2+> dependent regulation of cardiac mitochondria.2011

    • Author(s)
      Satoshi Matsuoka
    • Organizer
      International Symposium "Computational Physiology of Cardiac Myocytes and Pancreatic β-cells ; Interaction between Energy Metabolism and Membrane Excitability"
    • Place of Presentation
      京都市
    • Year and Date
      2011-01-30
    • Related Report
      2010 Annual Research Report
  • [Presentation] コンピュータシミュレーションによる心臓機能の探索2010

    • Author(s)
      松岡達
    • Organizer
      第27回日本心電学会学術集会
    • Place of Presentation
      大分市
    • Year and Date
      2010-10-09
    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Presentation] A simulation study of compensated heart failure. BBSRC UK-Japan Collaboration2010

    • Author(s)
      Satoshi Matsuoka.
    • Organizer
      Cardiac Electro-Mechanical Function : Cell-Organ Cross-Talk Revealed via Integration of experiments and Models.
    • Place of Presentation
      英国オックスフォード
    • Year and Date
      2010-09-07
    • Related Report
      2010 Final Research Report
  • [Presentation] A simulation study of compensated heart failure2010

    • Author(s)
      Satoshi Matsuoka
    • Organizer
      BBSRC UK-Japan Collaboration "Cardiac Electro-Mechanical Function : Cell-Organ Cross-Talk Revealed via Integration of experiments and Models.
    • Place of Presentation
      英国オックスフォード
    • Year and Date
      2010-09-07
    • Related Report
      2010 Annual Research Report
  • [Presentation] Role of Ca^<2+>-dependent regulation in mitochondrial energy metabolism. BBSRC UK-Japan Collaboration2010

    • Author(s)
      Ayako Takeuchi.
    • Organizer
      Cardiac Electro-Mechanical Function : Cell-Organ Cross-Talk Revealed via Integration of experiments and Models.
    • Place of Presentation
      英国オックスフォード
    • Year and Date
      2010-09-06
    • Related Report
      2010 Final Research Report
  • [Presentation] Role of Ca^<2+>-dependent regulation in mitochondrial energy metabolism2010

    • Author(s)
      Ayako Takeuchi
    • Organizer
      BBSRC UK-Japan Collaboration "Cardiac Electro-Mechanical Function : Cell-Organ Cross-Talk Revealed via Integration of experiments and Models.
    • Place of Presentation
      英国オックスフォード
    • Year and Date
      2010-09-06
    • Related Report
      2010 Annual Research Report
  • [Presentation] Simulation Study of Physiology and Pathology of Heart : An Integrated Cardiac Cell Model.2010

    • Author(s)
      Satoshi Matsuoka.
    • Organizer
      第74回日本循環器学会総会・学術集会
    • Place of Presentation
      京都市
    • Year and Date
      2010-03-05
    • Related Report
      2010 Final Research Report
  • [Presentation] Simulation Study of Physiology and Pathology of Heart : An Integrated Cardiac Cell Model2010

    • Author(s)
      松岡達
    • Organizer
      第74回日本循環器学会総会・学術集会
    • Place of Presentation
      京都市
    • Year and Date
      2010-03-05
    • Related Report
      2009 Annual Research Report
  • [Presentation] Model and Experimental studies on regulation of mitochondrial Ca by mitochondrial Na^+/Ca^<2+> exchanger.2009

    • Author(s)
      Satoshi Matsuoka.
    • Organizer
      36th International Congress of Physiological Science Satellite Symposium.
    • Place of Presentation
      香川県直島
    • Year and Date
      2009-08-03
    • Related Report
      2010 Final Research Report
  • [Presentation] Model and Experimental studies on regulation of mitochondrial Ca by mitochondrial Na^+/Ca^<2+> exchanger2009

    • Author(s)
      松岡達
    • Organizer
      36th International Congress of Physiological Science Satellite Symposium
    • Place of Presentation
      香川県直島
    • Year and Date
      2009-08-03
    • Related Report
      2009 Annual Research Report
  • [Presentation] Role of mitochondrial Na^+/Ca^<2+> exchange on B cell receptor-mediated Ca2+ responses in DT40 cell.2009

    • Author(s)
      Bongju Kim, Satoshi Matsuoka
    • Organizer
      36th International Congress of Physiological Sciences.
    • Place of Presentation
      京都市
    • Year and Date
      2009-07-28
    • Related Report
      2010 Final Research Report
  • [Presentation] Role of mitochondrial Na^+/Ca^<2+> exchange on B cell receptor-mediated Ca^<2+> responses in DT40 cell2009

    • Author(s)
      Bongju Kim, Satoshi Matsuoka
    • Organizer
      36th International Congress of Physiological Sciences
    • Place of Presentation
      京都市
    • Year and Date
      2009-07-28
    • Related Report
      2009 Annual Research Report
  • [Presentation] 心筋細胞におけるエネルギー代謝のシミュレーション2009

    • Author(s)
      松岡達
    • Organizer
      第26回日本心電学会学術集会
    • Place of Presentation
      京都市
    • Year and Date
      2009-07-04
    • Related Report
      2010 Final Research Report 2009 Annual Research Report
  • [Presentation] Computational integration of cardiac cell function.2009

    • Author(s)
      Satoshi Matsuoka.
    • Organizer
      2009 IUPS International Conference of Physiological Sciences.
    • Place of Presentation
      韓国Busan
    • Year and Date
      2009-01-16
    • Related Report
      2010 Final Research Report
  • [Presentation] Computational integration of cardiac cell function.2009

    • Author(s)
      Matsuoka S
    • Organizer
      2009 TUPS International Conference of Physiological Sciences.
    • Place of Presentation
      Busan, Korea
    • Year and Date
      2009-01-16
    • Related Report
      2008 Annual Research Report
  • [Presentation] 心筋細胞機能の包括的シミュレーション2008

    • Author(s)
      松岡達, Kyoto Model
    • Organizer
      自然科学研究機構「自然科学における階層と全体」平成20年度シンポジウム
    • Place of Presentation
      蒲郡市
    • Year and Date
      2008-12-17
    • Related Report
      2010 Final Research Report
  • [Presentation] Kyoto Model : 心筋細胞機能の包括的シミュレーション2008

    • Author(s)
      松岡達
    • Organizer
      自然科学研究機構「自然科学における階層と全体」平成20年度シンポジウム.
    • Place of Presentation
      蒲郡愛知
    • Year and Date
      2008-12-17
    • Related Report
      2008 Annual Research Report
  • [Presentation] Computational integration of cardiac cell function.2008

    • Author(s)
      Satoshi Matsuoka.
    • Organizer
      2008 Annual Conference of the Korean Association of Biological Sciences.
    • Place of Presentation
      韓国Mokpo
    • Year and Date
      2008-08-20
    • Related Report
      2010 Final Research Report
  • [Presentation] Computational integration of cardiac cell function2008

    • Author(s)
      Matsuoka S
    • Organizer
      2008 Annual Conference of the Korean Association of Biological Sciences.
    • Place of Presentation
      Mokpo, Korea.
    • Year and Date
      2008-08-20
    • Related Report
      2008 Annual Research Report
  • [Presentation] Cell/Biodynamics simulation project in Kyoto university : Medical systems biology of the heart. International Physiome Symposium20082008

    • Author(s)
      Satoshi Matsuoka.
    • Organizer
      Toward Holistic Medicine : Physiome and Oriental Medicine.
    • Place of Presentation
      韓国Seoul
    • Year and Date
      2008-04-11
    • Related Report
      2010 Final Research Report
  • [Presentation] Cell/Biodynamics simulation project in Kyoto university : Medical systems biology of the heart.2008

    • Author(s)
      Matsuoka S
    • Organizer
      International Physiome Symposium2008 "Toward Holistic Medicine : Physiome and Oriental Medicine"
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2008-04-11
    • Related Report
      2008 Annual Research Report

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Published: 2008-04-01   Modified: 2016-04-21  

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