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Screening of post-translational modified molecules by using functional zinc complexes

Research Project

Project/Area Number 20K06988
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Review Section Basic Section 47020:Pharmaceutical analytical chemistry and physicochemistry-related
Research InstitutionHiroshima University

Principal Investigator

Koike Tohru  広島大学, 医系科学研究科(薬), 教授 (90186586)

Project Period (FY) 2020-04-01 – 2023-03-31
Project Status Completed (Fiscal Year 2022)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2022: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2021: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2020: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywordsリン酸化タンパク質 / フォスタグ技術 / チオタグ技術 / 翻訳後修飾 / マイクロビーズ法 / 蛍光分析法 / リン酸化生体分子 / タンパク質の翻訳後修飾 / プロテオミクス / フォスタグ / チオタグ / リン酸化生体ぶんし / タンパク質の翻訳語修飾 / Phos-tag / Thio-tag
Outline of Research at the Start

本研究では,これまでに開発した蛍光発色基(TAMRA, Cy3, Cy5など)を有するフォスタグおよびチオタグ誘導体を当初使用するが,必要に応じてより水溶性の高い蛍光発色基(Sulfo-Cy3など)を有する新規蛍光性誘導体なども合成する。それら亜鉛錯体化合物を用いた翻訳後修飾調節分子の迅速スクリーニング法を確立するため,アセチル化酵素反応の蛍光検出法,マルチリン酸化反応の蛍光検出法,阻害剤プロファイリング実施例の作成,それら蛍光分析法を用いた迅速スクリーニング法を開発し,本法の創薬分野における医薬品シーズ探索研究法としての有用性を実証する。

Outline of Final Research Achievements

By using original functional zinc(II) complexes, phosphate- and thiol-capturing molecules (Phos-tag and Thio-tag), we have developed reliable analytical probes for the screening of post-translational modified molecules. In this study, we synthesized several original zinc(II) complex compounds (fluorescent Phos-tag, microbead-bound Phos-tag and Thio-tag), and used them to collect the basic chemical data necessary for the development of a rapid screening method for post-translational modification regulatory molecules. Based on the data, we developed a method for phosphorylation profiling of human proteins involved in kinase reactions and a method for screening kinase inhibitors using cultured cells.

Academic Significance and Societal Importance of the Research Achievements

マイクロモル濃度以下のリン酸化生体分子を生理条件下で選択的に捕捉する低分子亜鉛錯体化合物を用いて、生体機能制御を担うリン酸化シグナル分子の蛍光分析法やリン酸基やチオール基と親和性のあるマイクロビーズ法を開発した。その研究手法は,現在汎用されているリン酸化シグナルの分析法(放射性同位体法やリン酸化分子の抗体を用いる方法)と比較して,迅速な定量定性解析を可能にし,簡便な操作性や安全性などの利点をもち,癌やアルツハイマーなどの治療薬や次世代の抗菌薬やiPS細胞などの研究に適用可能な遺伝子制御試薬の開発に役立つオリジナルな分析技術である。

Report

(4 results)
  • 2022 Annual Research Report   Final Research Report ( PDF )
  • 2021 Research-status Report
  • 2020 Research-status Report
  • Research Products

    (17 results)

All 2023 2022 2021 2020

All Journal Article (17 results) (of which Peer Reviewed: 17 results,  Open Access: 17 results)

  • [Journal Article] Characterization of Zinc(II) Complex of 1,4,7,10-Tetrazacyclododecane and Deprotonated 5-Fluorouracil (FU) in Crystalline/Solution States and Evaluation of Anticancer Activity: Approach for Improving the Anticancer Activity of FU2023

    • Author(s)
      Yoshimi Ichimaru, Koichi Kato, Rina Nakatani, Kirara Sugiura, Hideki Mizutani, Emiko Kinoshita-Kikuta, Tohru Koike, Wanchun Jin, Masanori Imai, Hiromasa Kurosaki
    • Journal Title

      Inorganic Chemistry Communications

      Volume: 147 Pages: 110221-110221

    • DOI

      10.1016/j.inoche.2022.110221

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Crystal Structure of [{<i>m,m</i>-bis(Zn<sup>II</sup>-cyclen)}<sub>3</sub>(μ<sub>2</sub>-CO<sub>3</sub>)<sub>2</sub>(H<sub>2</sub>O)<sub>2</sub>](ClO<sub>4</sub>)<sub>8</sub>·<i>n</i>H<sub>2</sub>O2022

    • Author(s)
      Y. Ichimaru, K. Kato, K. Sugiura, C. Hirata, W. Jin, H. Fujioka, H. Kurosaki, and T. Koike
    • Journal Title

      X-ray Structure Analysis Online

      Volume: 38 Issue: 0 Pages: 53-55

    • DOI

      10.2116/xraystruct.38.53

    • ISSN
      1883-3578
    • Year and Date
      2022-03-10
    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Bis(nitrato-κO)(1,4,8,11-tetraazacyclotetradecane-κ4N)zinc(II) methanol monosolvate2022

    • Author(s)
      Ichimaru Yoshimi、Kato Koichi、Kurihara Masaaki、Jin Wanchun、Koike Tohru、Kurosaki Hiromasa
    • Journal Title

      IUCrData

      Volume: 7 Issue: 8 Pages: 220854-220863

    • DOI

      10.1107/s2414314622008549

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Use of <i>Escherichia coli</i> expression system for analyzing kinase motifs2022

    • Author(s)
      Kinoshita-Kikuta, E., Ino, Y., Kimura, Y., Akiyama, T., Kinoshita, E., Koike, T.
    • Journal Title

      Journal of Electrophoresis

      Volume: 66 Issue: 1 Pages: 13-20

    • DOI

      10.2198/jelectroph.66.13

    • ISSN
      1349-9394, 1349-9408
    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Phos-tag-based phosphate affinity chromatographic techniques2022

    • Author(s)
      E. Kinoshita-Kikuta, E. Kinoshita, and T. Koike
    • Journal Title

      Journal of Chromatography Open

      Volume: 2 Pages: 10051-10061

    • DOI

      10.1016/j.jcoa.2022.100051

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Crystal Structure of Bis{1,3-bis[bis(pyridin-2-ylmethyl)amino]propan-​2-olato-dizinc(II)}orthophosphate Tris(perchlorate) Octahydrate, [(Phos-tag)<sub>2</sub>-PO<sub>4</sub><sup>3−</sup>][ClO<sub>4</sub><sup>−</sup>]<sub>3</sub>·8H<sub>2</sub>O2021

    • Author(s)
      Ichimaru Yoshimi、Kato Koichi、Jin Wanchun、Sugiura Kirara、Kinoshita-Kikuta Emiko、KINOSHITA Eiji、Kurosaki Hiromasa、Koike Tohru
    • Journal Title

      X-ray Structure Analysis Online

      Volume: 37 Issue: 0 Pages: 87-88

    • DOI

      10.2116/xraystruct.37.87

    • NAID

      130008127785

    • ISSN
      1883-3578
    • Year and Date
      2021-12-10
    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Crystal Structure of [1<sup>1</sup>,1<sup>4</sup>,1<sup>7</sup>,1<sup>10</sup>,5<sup>1</sup>,5<sup>4</sup>,5<sup>7</sup>,5<sup>10</sup>-Octaaza-1,5(1,4)-dicyclododecana-3,7(1,3)-dibenzenacyclooctaphane]zinc(II) tetrakis(nitrate), [<i>m,m</i>-bis(Zn<sup>II</sup>-cyclen)](NO<sub>3</sub>)<sub>4</sub>2021

    • Author(s)
      Y.Ichimaru, J. Wanchun, Y. Yamaguchi, K. Sugiura, M.Imai H. Kurosaki, H. Fujioka, Tohru Koike, Y. Hieda, and K. Kato
    • Journal Title

      X-ray Structure Analysis Online

      Volume: 37 Issue: 0 Pages: 15-16

    • DOI

      10.2116/xraystruct.37.15

    • NAID

      130007996645

    • ISSN
      1883-3578
    • Year and Date
      2021-03-10
    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] An assay of human tyrosine protein kinase ABL activity using an Escherichia coli protein expression system.2021

    • Author(s)
      Kinoshita-Kikuta E, Yoshimoto M, Yano M, Eiji Kinoshita, Koike T.
    • Journal Title

      Biotechniques

      Volume: 70(4) Issue: 4 Pages: 209-217

    • DOI

      10.2144/btn-2020-0154

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Aqua(1,4,7,10-tetraazacyclodecane =cyclen)zinc(II) diperchlorate2021

    • Author(s)
      Y.Ichimaru, K. Kato, H. Kurosaki, H. Fujioka, M. Sakai, Y. Yamaguchi, J. Wanchun, K. Sugiura, M.Imai, and Tohru Koike
    • Journal Title

      IUCrData

      Volume: 6 Issue: 4 Pages: 397-415

    • DOI

      10.1107/s2414314621003977

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Characterization of the binding of adenosine-5’-monophosphate to a mu-type alkoxide-linked dinuclear zinc(II) complex in crystal and solution state.2021

    • Author(s)
      Kinoshita-Kikuta, E., Ichimaru, Y., Yamano, Y., Kato, K., Kurosaki, H. Eiji Kinoshita, Koike, T.
    • Journal Title

      Bull. Chem. Soc. Jpn.

      Volume: 94(11) Issue: 11 Pages: 2670-2677

    • DOI

      10.1246/bcsj.20210280

    • NAID

      130008137574

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Characterization of phosphorylation status and kinase activity of Src family kinases expressed in cell-based and cell-free protein expression system.2021

    • Author(s)
      Kinoshita-Kikuta E, Eiji Kinoshita, Suga M, Higashida M, Yamane Y, Nakamura T, Koike T.
    • Journal Title

      Biomolecules

      Volume: 11(10) Issue: 10 Pages: 1448-1448

    • DOI

      10.3390/biom11101448

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Evaluation of four phosphopeptide enrichment strategies for mass spectrometry‐based proteomic analysis2021

    • Author(s)
      Ino Yoko、Kinoshita Eiji、Kinoshita‐Kikuta Emiko、Akiyama Tomoko、Nakai Yusuke、Nishino Kohei、Osada Makoto、Ryo Akihide、Hirano Hisashi、Koike Tohru、Kimura Yayoi
    • Journal Title

      PROTEOMICS

      Volume: 22 Issue: 7 Pages: 2100216-2100216

    • DOI

      10.1002/pmic.202100216

    • Related Report
      2021 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] An immuno-dot blot assay for screening histidine kinase inhibitors2020

    • Author(s)
      Kinoshita-Kikuta Emiko、Maruta Shino、Eguchi Yoko、Igarashi Masayuki、Okajima Toshihide、Utsumi Ryutaro、Kinoshita Eiji、Koike Tohru
    • Journal Title

      Analytical Biochemistry

      Volume: 600 Pages: 113765-113765

    • DOI

      10.1016/j.ab.2020.113765

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Phos-tag-based micropipette-tip method for analysis of phosphomonoester-type impurities in synthetic oligonucleotides2020

    • Author(s)
      M. Tsunehiro, K. Sasaki, E. Kinoshita-Kikuta, E. Kinoshita, and T. Koike
    • Journal Title

      Journal of Chromatography B

      Volume: 1151 Pages: 122198-122206

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Crystal Structure of [3-(1,4,7,10-Tetraazacyclododecan-1-yl)propan-1-amine]zinc(II) Bis(perchlorate)2020

    • Author(s)
      Y. Ichimaru, M. Imai, H. Fujioka, T. Koike, H. Kurosaki, and K. Kato
    • Journal Title

      X-ray Structure Analysis Online

      Volume: 36 Issue: 0 Pages: 43-44

    • DOI

      10.2116/xraystruct.36.43

    • NAID

      130007925228

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Protein-N-myristoylation-dependent phosphorylation of serine 13 of tyrosine kinase Lyn by casein kinase 1γ at the Golgi during intracellular protein traffic2020

    • Author(s)
      Kinoshita-Kikuta Emiko、Utsumi Toshihiko、Miyazaki Aya、Tokumoto Chiharu、Doi Kyosuke、Harada Haruna、Kinoshita Eiji、Koike Tohru
    • Journal Title

      Scientific Reports

      Volume: 10 Issue: 1 Pages: 16273-16273

    • DOI

      10.1038/s41598-020-73248-0

    • NAID

      120007169771

    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] A dot-blot-staining method for detecting phosphoproteins with a Phos-tag Aqua fluorescent dye2020

    • Author(s)
      Kinoshita-Kikuta Emiko、Akayama Keisuke、Kinoshita Eiji、Koike Tohru
    • Journal Title

      Journal of Electrophoresis

      Volume: 64 Issue: 1 Pages: 7-11

    • DOI

      10.2198/jelectroph.64.7

    • NAID

      130007961315

    • ISSN
      1349-9394, 1349-9408
    • Related Report
      2020 Research-status Report
    • Peer Reviewed / Open Access

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Published: 2020-04-28   Modified: 2024-01-30  

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