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Development of the auxin inducible degron system for the study of cultured cells and animals

Research Project

Project/Area Number 21681027
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypeSingle-year Grants
Research Field Applied genomics
Research InstitutionNational Institute of Genetics (2010-2012)
Osaka University (2009)

Principal Investigator

KANEMAKI Masato  国立遺伝学研究所, 新分野創造センター, 准教授 (20444507)

Project Period (FY) 2009 – 2012
Project Status Completed (Fiscal Year 2012)
Budget Amount *help
¥25,610,000 (Direct Cost: ¥19,700,000、Indirect Cost: ¥5,910,000)
Fiscal Year 2012: ¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2011: ¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2010: ¥6,760,000 (Direct Cost: ¥5,200,000、Indirect Cost: ¥1,560,000)
Fiscal Year 2009: ¥9,750,000 (Direct Cost: ¥7,500,000、Indirect Cost: ¥2,250,000)
Keywords条件特異的変異株 / 条件特異的変異体 / タンパク質分解 / 植物ホルモン
Research Abstract

We have successfully transplanted a plant specific degradation pathway, that is controlled by the plant hormone auxin, to non-plant cells. This new technology, termed the auxin-inducible degron (AID) system, allows us to deplete a protein of interest in an auxin dependent manner. We showed that AID works in budding and fission yeasts, as well as in chicken DT40, mouse and human cells, and the results were published. We also applied the AID technology for the characterization of proteins in budding yeast and the results were published. Moreover, we successfully made an improved version of AID and applied for a patent.

Report

(5 results)
  • 2012 Annual Research Report   Final Research Report ( PDF )
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • 2009 Annual Research Report
  • Research Products

    (57 results)

All 2013 2012 2011 2010 2009 Other

All Journal Article (17 results) (of which Peer Reviewed: 16 results) Presentation (21 results) Book (5 results) Remarks (9 results) Patent(Industrial Property Rights) (5 results) (of which Overseas: 1 results)

  • [Journal Article] Frontiers of Protein Expression Control with Conditional Degrons2013

    • Author(s)
      Kanemaki MT
    • Journal Title

      Pflugers Archive - European Journal of Physiology

      Volume: 465 Pages: 419-425

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The Elg1 Replication Factor C-like Complex Functions in PCNA Unloading during DNA Replication2013

    • Author(s)
      Kubota T, Nishimura K, Kanemaki MT, Donaldson AD.
    • Journal Title

      Molecular Cell

      Volume: 50 Issue: 2 Pages: 273-280

    • DOI

      10.1016/j.molcel.2013.02.012

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Frontiers of protein expression control with conditional degrons2013

    • Author(s)
      Kanemaki MT.
    • Journal Title

      Pflugers Archive - European Journal of Physiology

      Volume: 465 Issue: 3 Pages: 419-425

    • DOI

      10.1007/s00424-012-1203-y

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mcm8 and Mcm9 Form a Complex that Functions in Homologous Recombination Repair Induced by DNA Interstrand Crosslinksl2012

    • Author(s)
      Nishimura K, Ishiai M, Horikawa K, Fukagawa T, Takata M, Takisawa H, Kanemaki MT
    • Journal Title

      Molecular Cell

      Volume: 47 Pages: 511-522

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Mcm10 Plays a Role in Functioning of the Eukaryotic Replicative DNA Helicase,2012

    • Author(s)
      Watase G, Takisawa H, Kanemaki MT
    • Journal Title

      Cdc45-Mcm-GINS Current Biology

      Volume: 22 Pages: 343-349

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Mcm8 and Mcm9 form a complex that functions in homologous recombination induced by interstrand crosslinks2012

    • Author(s)
      K. Nishimura
    • Journal Title

      Molecular Cell

      Volume: 47 Issue: 4 Pages: 511-522

    • DOI

      10.1016/j.molcel.2012.05.047

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mcm10 Plays a Role in Functioning of the Eukaryotic Replicative DNA Helicase, Cdc45-Mcm-GINS2012

    • Author(s)
      Watase G, Takisawa H, Kanemaki M
    • Journal Title

      Current Biology

      Volume: 22 Pages: 343-349

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Inheritance of Histone Modifications Depends upon the Location in the Chromosome in Saccharomyces cerevisiae2011

    • Author(s)
      Masumoto H, Nakato R, Kanemaki M, Shirahige K, Hachinohe M
    • Journal Title

      PLoS One

      Volume: 6(12)

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Sld7, an Sld3-associated protein required for efficient chromosomal DNA replication in budding yeast2011

    • Author(s)
      Tanaka T, Umemori T, Endo S, Muramatsu S, Kanemaki M, Kamimura Y, Obuse C, Araki H
    • Journal Title

      EMBO Journal

      Volume: 30 Pages: 30-30

    • Related Report
      2012 Final Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Auxin-inducible protein depletion system in fission yeast2011

    • Author(s)
      Kanke M, Nishimura K, Kanemaki M, Kakimoto T, Takahashi TS, Nakagawa T, Masukata H.
    • Journal Title

      BMC Cell Biology

      Volume: 12(1) Pages: 8-8

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] The Inheritance of Histone Modifications Depends upon the Location in the Chromosome in Saccbaromyces cerevisiae2011

    • Author(s)
      Masumoto H, Nakato R, Kanemaki M, Shirahige K, Hachinohe M
    • Journal Title

      PLoS One

      Volume: 6

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Auxin-inducible protein depletion system in fission yeast2011

    • Author(s)
      Kanke, et al.
    • Journal Title

      BMC Cell Biology

      Volume: 12 Pages: 8-8

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Condensins promote chromosome recoiling during early anaphase to complete sister chromatid separation2010

    • Author(s)
      Renshaw MJ, Ward JJ, Kanemaki M, Natsume K, Nedelec FJ, Tanaka TU
    • Journal Title

      Developmental Cell

      Volume: 19 Pages: 232-44

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] Condensins promote chromosome recoiling during early anaphase to complete sister chromatid separation2010

    • Author(s)
      Renshaw, et al.
    • Journal Title

      Developmental Cell

      Volume: 19 Pages: 232-244

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 動物の培養細胞における迅速なタンパク質発現制御法(AID法)2010

    • Author(s)
      西村浩平, 鐘巻将人
    • Journal Title

      実験医学

      Volume: 28 Pages: 2279-2284

    • Related Report
      2010 Annual Research Report
  • [Journal Article] An auxin-based degron system for the rapid depletion of proteins in non-plant cells2009

    • Author(s)
      Nishimura K, Fukagawa T, Takisawa H, Kakimoto T, Kanemaki M
    • Journal Title

      Nature Methods

      Volume: 6 Pages: 917-22

    • Related Report
      2012 Final Research Report
    • Peer Reviewed
  • [Journal Article] An auxin-based dgeron system for the rapid depletion of proteins in nonplamt cells2009

    • Author(s)
      Nishimura, K., Fukagawa, T., Takisawa, H., Kakimoto, T., Kanemaki, M.
    • Journal Title

      Nature Methods 6

      Pages: 917-922

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] Mcm8 and Mcm9 form a novel complex that functions in HR repair induced by DNA interstrand crosslinks2012

    • Author(s)
      鐘巻 将人
    • Organizer
      染色体ワークショップ,
    • Place of Presentation
      仙台
    • Year and Date
      2012-01-26
    • Related Report
      2012 Final Research Report
  • [Presentation] Mcm8 and Mcm9 form a complex that functions in homologous recombination repair induced by DNA interstrand crosslinks2012

    • Author(s)
      Kanemaki, M
    • Organizer
      The 8th 3R symposium,
    • Place of Presentation
      Awaji island, Japan
    • Related Report
      2012 Final Research Report
  • [Presentation] Mcm8 and Mcm9 Form a Complex that Functions in Homologous Recombination Repair Induced by DNA Interstrand Crosslinks2012

    • Author(s)
      Nishimura K., Ishiai M., Fukagawa T., Takata M., Takisawa H. and Kanemaki M.
    • Organizer
      24th Annual Fanconi Anemia Research Fund Scientific Symposium
    • Place of Presentation
      Denver, USA,
    • Related Report
      2012 Final Research Report
  • [Presentation] Mcm8 and Mcm9 Form a Complex that Functions in Homologous Recombination Repair Induced by DNA Interstrand Crosslinks2012

    • Author(s)
      Nishimura K., Ishiai M., Fukagawa T., Takata M., Takisawa H. and Kanemaki M.
    • Organizer
      24th Annual Fanconi Anemia Research Fund Scientific Symposium
    • Place of Presentation
      Denver, USA
    • Related Report
      2012 Annual Research Report
  • [Presentation] Mcm8 and Mcm9 form a complex that functions in homologous recombination repair induced by DNA interstrand crosslinks2012

    • Author(s)
      Kanemaki, M.
    • Organizer
      The 8th 3R symposium
    • Place of Presentation
      Awaji Island, Japan
    • Related Report
      2012 Annual Research Report
  • [Presentation] MCM8 and MCM9 form a novel complex involved in resistance to DNA crosslinking regents2011

    • Author(s)
      Nishimura K., Ishiai M., Fukagawa T., Takata M., Takisawa H., Kanemaki M.
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2011-12-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] Mcm10 is required for origin unwinding in S.cerevisiae2011

    • Author(s)
      Watase G, Takisawa H, Kanemaki M
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2011-12-15
    • Related Report
      2011 Annual Research Report
  • [Presentation] MCM8 and MCM9 form a novel complex involved in resistance to DNA crosslinking regents Cold Spring Harbor Meeting on Eukaryotic DNA Replication & Genome Maintenance2011

    • Author(s)
      Kanemaki M.
    • Organizer
      Cold Spring Harbor
    • Place of Presentation
      USA
    • Year and Date
      2011-09-07
    • Related Report
      2012 Final Research Report
  • [Presentation] MCM8 and MCM9 form a novel complex involved in resistance to DNA crosslinking regents2011

    • Author(s)
      Kanemaki M.
    • Organizer
      Cold Spring Harbor Meeting on Eukaryotic DNA Replication & Genome Maintenance
    • Place of Presentation
      Cold Spring Harbor Laboratory, NY, USA
    • Year and Date
      2011-09-07
    • Related Report
      2011 Annual Research Report
  • [Presentation] 染色体複製因子MCM10の出芽酵母における新たな機能2010

    • Author(s)
      渡瀬成治, et al.
    • Organizer
      BMB2010 日本分子生物学会/日本生化学会合同年会
    • Place of Presentation
      神戸国際展示場
    • Year and Date
      2010-12-08
    • Related Report
      2010 Annual Research Report
  • [Presentation] An auxin based degron system to the new genetics of animal cells International Symposium on Cell Function mediated2010

    • Author(s)
      K. Nishimura and M. Kanemaki
    • Organizer
      Small Molecules
    • Place of Presentation
      筑波大学
    • Year and Date
      2010-11-08
    • Related Report
      2012 Final Research Report
  • [Presentation] An auxin based degron system to the new genetics of animal cells2010

    • Author(s)
      K.Nishimura, M.Kanemaki
    • Organizer
      International Symposium on Cell Function mediated by Small Molecules
    • Place of Presentation
      筑波大学 総合研究棟D
    • Year and Date
      2010-11-08
    • Related Report
      2010 Annual Research Report
  • [Presentation] 合成生物学的アイデアに基づいた植物ホルモン誘導デグロン法によりタンパク質発現調節2010

    • Author(s)
      鐘巻将人
    • Organizer
      第19回酵母合同シンポジウム
    • Place of Presentation
      東京大学
    • Year and Date
      2010-06-25
    • Related Report
      2012 Final Research Report
  • [Presentation] 合成生物学的アイデアに基づいた植物ホルモン誘導デグロン法によりタンパク質発現調節2010

    • Author(s)
      鐘巻将人
    • Organizer
      第19回酵母合同シンポジウム
    • Place of Presentation
      東京大学 弥生講堂
    • Year and Date
      2010-06-25
    • Related Report
      2010 Annual Research Report
  • [Presentation] AID法を用いた出芽酵母および動物細胞内における染色体制御因子の遺伝学的解析2010

    • Author(s)
      鐘巻 将人、西村浩平、渡瀬成治、深川竜郎、滝澤温彦
    • Organizer
      染色体ワークショップ
    • Place of Presentation
      箱根
    • Year and Date
      2010-01-20
    • Related Report
      2012 Final Research Report
  • [Presentation] AID法を用いた出芽酵母および動物細胞内における染色体制御因子の遺伝学的解析2010

    • Author(s)
      鐘巻将人、西村浩平、渡瀬成治、深川竜郎、滝澤温彦
    • Organizer
      第27回染色体ワークショップ
    • Place of Presentation
      御殿場高原時之栖(静岡)
    • Year and Date
      2010-01-20
    • Related Report
      2009 Annual Research Report
  • [Presentation] 植物ホルモンオーキシン依存的タンパク質分解を応用した迅速なタンパク質除去法による出芽酵母と動物細胞コンディショナル変化部の作成2009

    • Author(s)
      西村浩平, 深川竜郎, 柿本辰男, 滝澤温彦, 鐘巻将人
    • Organizer
      日本分子生物学会 第32回年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-12
    • Related Report
      2009 Annual Research Report
  • [Presentation] 出芽酵母における新たなコンディショナル変異株を用いた、複製因子Mcm10の機能解析2009

    • Author(s)
      渡瀬成治, 滝澤温彦, 鐘巻将人
    • Organizer
      日本分子生物学会 第32回年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-11
    • Related Report
      2009 Annual Research Report
  • [Presentation] ヒストンシャペロンEACTは複製伸長反応において複製フォークの安定化に関わる2009

    • Author(s)
      中村淳児, Richard Jones, 久保田弓子, 室伏壙, 滝澤温彦, 鐘巻将人
    • Organizer
      日本分子生物学会 第32回年会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2009-12-09
    • Related Report
      2009 Annual Research Report
  • [Presentation] Exploring factors involving maintenance and restart of the stalled forks by using a novel method to induce rapid degradation in budding yeast Clod Spring Harbor Symposium on Eukaryotic DNA Replication and Genome Maintenance2009

    • Author(s)
      Nishimura, K., Takisawa, H., Kakimoto,T. and Kanemaki, M
    • Organizer
      Cold Spring Harbor
    • Place of Presentation
      USA
    • Year and Date
      2009-09-03
    • Related Report
      2012 Final Research Report
  • [Presentation] Exploring factors involving maintenance and restart of the stalled forks by using a novel method to induce rapid degradation in budding yeast2009

    • Author(s)
      Nishimura, K., Takisawa, H., Kakimoto, T., Kanemaki, M.
    • Organizer
      Clod Spring Harbor Symposium on Eukaryotic DNA Replication and Genome Maintenance
    • Place of Presentation
      Cold Spring Harbor Laboratory, NY, USA
    • Year and Date
      2009-09-03
    • Related Report
      2009 Annual Research Report
  • [Book] ケミカルバイオロジー 成功事例から学ぶ研究戦略2013

    • Author(s)
      鐘巻将人
    • Publisher
      丸善出版
    • Related Report
      2012 Annual Research Report
  • [Book] Mcm8とMcm9は複合体を形成しDNA二本鎖間架橋のひき起こす相同組換え修復において機能する2013

    • Author(s)
      西村浩平, 鐘巻将人
    • Publisher
      First Author's
    • Related Report
      2012 Annual Research Report
  • [Book] 成功事例から学ぶ研究戦略2012

    • Author(s)
      鐘巻将人
    • Publisher
      ケミカルバイオロジー
    • Related Report
      2012 Final Research Report
  • [Book] Mcm8とMcm9は複合体を形成しDNA二本鎖間架橋の引き起こす相同組換え修復において機能する2012

    • Author(s)
      西村浩平, 鐘巻将人
    • Publisher
      First Author'
    • URL

      http://first.lifesciencedb.jp/archives/5309

    • Related Report
      2012 Final Research Report
  • [Book] 動物の培養細胞における迅速なタンパク質発現制御法(AID法)2010

    • Author(s)
      西村浩平, 鐘巻将人
    • Publisher
      実験医学
    • Related Report
      2012 Final Research Report
  • [Remarks]

    • URL

      http://www.nig.ac.jp/section/kanemaki/kanemaki-j.html

    • Related Report
      2012 Final Research Report
  • [Remarks]

    • URL

      http://www.nig.ac.jp/labs/MolFunc/Molecular_Function_HP/Home.html

    • Related Report
      2012 Final Research Report
  • [Remarks] DNA 二本鎖架橋修復の相同組換え反応に関与する新規複合体の発見

    • URL

      http://www.nig.ac.jp/Research-Highlights/992/1082.html

    • Related Report
      2012 Annual Research Report
  • [Remarks] 分子機能研究室HP

    • URL

      http://www.nig.ac.jp/labs/MolFunc/Molecular_Function_HP/Home.html

    • Related Report
      2012 Annual Research Report
  • [Remarks] 分子機能研究室・鐘巻研究室HP

    • URL

      http://www.nig.ac.jp/section/kanemaki/kanemaki-j.html

    • Related Report
      2012 Annual Research Report
  • [Remarks]

    • URL

      http://www.nig.ac.jp/section/kanemaki/kanemaki-j.html

    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://www.nig.ac.jp/labs/MolFunc/Molecular_Function_HP/Home.html

    • Related Report
      2011 Annual Research Report
  • [Remarks]

    • URL

      http://www.nig.ac.jp/section/kanemaki/kanemaki-j.html

    • Related Report
      2010 Annual Research Report
  • [Remarks] 当研究科のHPに新着論文の記事がでました。

    • URL

      http://www.bio.sci.osaka-u.ac.jp/newinfo/info50.html

    • Related Report
      2009 Annual Research Report
  • [Patent(Industrial Property Rights)] タンパク質分解誘導性細胞、その製造方法、および、タンパク質分解の制御方法2013

    • Inventor(s)
      鐘巻将人、西村浩平、柿本辰男、滝澤温彦
    • Industrial Property Rights Holder
      大阪大学
    • Filing Date
      2013-04-26
    • Related Report
      2012 Final Research Report
  • [Patent(Industrial Property Rights)] 改良型オーキシン分解誘導法を用いたタンパク質発現制御2011

    • Inventor(s)
      鐘巻将人、西村浩平、小畑有以、三村覚、滝澤温彦
    • Industrial Property Rights Holder
      大阪大学、国立遺伝学研究所
    • Industrial Property Number
      2011-252147
    • Filing Date
      2011-11-18
    • Related Report
      2012 Final Research Report
  • [Patent(Industrial Property Rights)] 真核細胞におけるタンパク質分解誘導方法2011

    • Inventor(s)
      鐘巻将人、西村浩平、滝澤温彦、三村覚、小畑有以
    • Industrial Property Rights Holder
      国立遺伝学研究所、大阪大学
    • Industrial Property Number
      2011-511193
    • Filing Date
      2011-11-18
    • Related Report
      2011 Annual Research Report
  • [Patent(Industrial Property Rights)] 哺乳類動物細胞におけるタンパク質分解誘導法2009

    • Inventor(s)
      鐘巻将人、西村浩平、柿本辰男、深川竜郎、滝澤温彦
    • Industrial Property Rights Holder
      大阪大学、国立遺伝学研究所
    • Industrial Property Number
      2009-110449
    • Filing Date
      2009-11-25
    • Related Report
      2012 Final Research Report
  • [Patent(Industrial Property Rights)] 哺乳類動物細胞におけるタンパク質分解誘導法2009

    • Inventor(s)
      代表者:鐘巻将人共同発明者:西村浩平、柿本辰男、深川竜郎、滝澤温彦
    • Industrial Property Rights Holder
      大阪大学
    • Industrial Property Number
      2009-110449
    • Filing Date
      2009-04-30
    • Related Report
      2009 Annual Research Report
    • Overseas

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Published: 2009-04-01   Modified: 2019-07-29  

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