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A computer simulation for designing module structure of microdevices powered by gliding bacteria

Research Project

Project/Area Number 21760192
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Intelligent mechanics/Mechanical systems
Research InstitutionGifu University

Principal Investigator

NITTA Takahiro  Gifu University, 工学部, 助教 (20402216)

Project Period (FY) 2009 – 2010
Project Status Completed (Fiscal Year 2010)
Budget Amount *help
¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2010: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2009: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Keywordsマイクロ・ナノデバイス / マイクロマシン / シミュレーション / 細菌
Research Abstract

Purposes of this study are to develop a computer simulation which reproduced gliding movements of Mycoplasma mobile on micropatterned surfaces, and a searching method for efficient micropatterns. To this end, we observed gliding movements of M.mobile and measured parameters which are required to develop the computer simulation. Simulated movements of M. mobile were similar to those in experiments. In order to find efficient micropatterns, we employed a genetic algorithm. The feasibility of the method was tested with simulated gliding movements of kineisn/microtubule-based molecular shuttles, which we have established. With using this search method, a rectifier structure whose performance was the highest ever reported was designed. In addition, a module structure which had a novel functionality was successfully design. These results showed the feasibility of the search method.

Report

(3 results)
  • 2010 Annual Research Report   Final Research Report ( PDF )
  • 2009 Annual Research Report
  • Research Products

    (10 results)

All 2010 2009 Other

All Journal Article (3 results) (of which Peer Reviewed: 2 results) Presentation (7 results)

  • [Journal Article] マイクロパターン基板上でのMycoplasma mobile滑走運動のシミュレーション2010

    • Author(s)
      新田高洋、浅野祥吾、平塚祐一、宮田真人、平野元久
    • Journal Title

      ロボティクス・メカトロニクス講演会2010講演論文集

    • Related Report
      2010 Annual Research Report 2010 Final Research Report
  • [Journal Article] EVOLUTIONARY OPTIMIZATION OF GUIDING TRACK DESIGNS FOR MOLECULAR SHUTTLES POWERED BY KINESIN MOTORS2009

    • Author(s)
      Takuya Sunagawa, Akihito Tanahashi
    • Journal Title

      Proceedings of Thirteenth International Conference on Miniaturized Systems for Chemistry and Life Sciences

      Pages: 207-209

    • Related Report
      2010 Final Research Report
    • Peer Reviewed
  • [Journal Article] EVOLUTIONARY OPTIMIZATION OF GUIDING TRACK DESIGNS FOR MOLECULAR SHUTTLES POWERED BY KINESIN MOTORS2009

    • Author(s)
      Takuya Sunagawa, Akihito Tanahashi, Motohisa Hirano, Matthew E.Downs, Henry Hess, Takahiro Nitta
    • Journal Title

      Proceedings of microTAS 2009 1

      Pages: 207-209

    • Related Report
      2009 Annual Research Report
    • Peer Reviewed
  • [Presentation] EVOLUTIONARY OPTIMIZATION OF GUIDING TRACK DESIGNS FOR MOLECULAR SHUTTLES POWERED BY KINESIN MOTORS2009

    • Author(s)
      Takuya Sunagawa, Akihito Tanahashi, Motohisa Hirano, Matthew E.Downs, Henry Hess, Takahiro Nitta
    • Organizer
      micro TAS 2009
    • Place of Presentation
      Jeju, Korea
    • Year and Date
      2009-11-02
    • Related Report
      2009 Annual Research Report
  • [Presentation] Module Structural Design for Material Transport System Propelled by Kinesin with Genetic Algorithm2009

    • Author(s)
      砂川拓也、棚橋章仁、平野元久、マシュー・ダウンズ、ヘンリー・ヘス、新田高洋
    • Organizer
      生物物理学会
    • Place of Presentation
      徳島
    • Year and Date
      2009-11-01
    • Related Report
      2009 Annual Research Report
  • [Presentation] An improved simulation of Mycoplasma mobile movements on micropatterned surfaces2009

    • Author(s)
      新田高洋、浅野祥吾、平塚祐一、宮田真人、平野元久
    • Organizer
      生物物理学会
    • Place of Presentation
      徳島
    • Year and Date
      2009-10-31
    • Related Report
      2009 Annual Research Report
  • [Presentation] マイクロパターン基板上でのMycoplasma mobile滑走運動のシミュレーション

    • Author(s)
      新田高洋、浅野祥吾、平塚祐一、宮田真人、平野元久
    • Organizer
      日本機械学会ロボティクス・メカトロニクス講演会2010
    • Place of Presentation
      旭川
    • Related Report
      2010 Final Research Report
  • [Presentation] EVOLUTIONARY OPTIMIZATION OF GUIDING TRACK DESIGNS FOR MOLECULAR SHUTTLES POWERED BY KINESIN MOTORS

    • Author(s)
      Takuya Sunagawa, Akihito Tanahashi
    • Organizer
      Thirteenth International Conference on Miniaturized Systems for Chemistry and Life Sciences
    • Place of Presentation
      Jeju, Korea
    • Related Report
      2010 Final Research Report
  • [Presentation] An improved simulation of Mycoplasma mobile movements on micropatterned surfaces

    • Author(s)
      Takahiro Nitta, Shogo Asano, Yuichi Hiratsuka, Motohisa Hirano
    • Organizer
      日本生物物理学会第47回年会
    • Place of Presentation
      徳島
    • Related Report
      2010 Final Research Report
  • [Presentation] Module structural design for material transport system propelled by kinesin with genetic algorithm

    • Author(s)
      Takuya Sunagawa, Akihito Tanahashi
    • Organizer
      日本生物物理学会第47回年会
    • Place of Presentation
      徳島
    • Related Report
      2010 Final Research Report

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Published: 2009-04-01   Modified: 2016-04-21  

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