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Analysis of candidate genes for heterotic QTL discovered from a gene pool of wild mice

Research Project

Project/Area Number 22380149
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied animal science
Research InstitutionNagoya University

Principal Investigator

ISHIKAWA Akira  名古屋大学, 生命農学研究科, 准教授 (20211724)

Co-Investigator(Renkei-kenkyūsha) TSUKADA Akira  名古屋大学, 大学院生命農学研究科, 助教 (20343212)
Project Period (FY) 2010-04-01 – 2014-03-31
Project Status Completed (Fiscal Year 2013)
Budget Amount *help
¥15,860,000 (Direct Cost: ¥12,200,000、Indirect Cost: ¥3,660,000)
Fiscal Year 2012: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2011: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2010: ¥6,890,000 (Direct Cost: ¥5,300,000、Indirect Cost: ¥1,590,000)
Keywords育種学 / 遺伝学 / マウス / QTL / ヘテローシス / QTL
Research Abstract

Heterosis was found more than 100 years ago. Since then, it has become a genetic phenomenon essential for animal and plant breeding. However, no causative gene for heterosis has been cloned. I previously discovered a new QTL (quantitative trait locus) for heterosis of body weight from a gene pool of wild mice and I fine-mapped it to a limited chromosomal region by QTL analysis using a congenic mouse strain. In this study, I performed exome analysis, phenotypic analysis and gene-expression analysis using congenic and subcongenic mouse strains developed in previous and present studies. I fine-mapped the body weight QTL to an about 6-Mb genomic region, although its heterotic effect was unfortunately not confirmed in this study. I also revealed that four genes are putative candidate genes for the body weight QTL.

Report

(4 results)
  • 2013 Final Research Report ( PDF )
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (24 results)

All 2013 2012 2011 2010

All Journal Article (9 results) (of which Peer Reviewed: 8 results) Presentation (15 results) (of which Invited: 1 results)

  • [Journal Article] Fine mapping of quantitative trait loci affecting organ weights by mouse intersubspecific subcongenic strain analysis2013

    • Author(s)
      Mollah, Md. B. R.、Ishikawa, A
    • Journal Title

      Anim. Sci. J

      Volume: 84 Pages: 296-302

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] Fine mapping of quantitative trait loci affecting organ weights by mouse intersubspecific subcongenic strain analysis2013

    • Author(s)
      Mollah, Md. B. R. and Ishikawa, A.
    • Journal Title

      Animal Science Journal

      Volume: 印刷中 Issue: 4 Pages: 296-302

    • DOI

      10.1111/asj.12004

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 量的形質の遺伝的構造:マウス成長関連形質のQTL解析から学んだこと2011

    • Author(s)
      石川明
    • Journal Title

      第17回動物遺伝育種シンポジウムプロシーディングス

      Pages: 35-41

    • NAID

      120003560512

    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Journal Article] Intersubspecific subcongenic mouse strain analysis reveals closely linked QTLs with opposite effects on body weight2011

    • Author(s)
      Mollah, Md. B. R.、Ishikawa, A
    • Journal Title

      Mamm. Genome

      Volume: 22 Pages: 282-289

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] A proximal genomic region of mouse chromosome 10 contains quantitative trait loci affecting fatness2011

    • Author(s)
      Ishikawa, A.、Tanahashi, T.、Kodama. H
    • Journal Title

      Anim. Sci. J

      Volume: 82 Pages: 209-214

    • NAID

      10030376076

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] A proximal genomic region of mouse chromosome 10 contains quantitative trait loci affecting fatness2011

    • Author(s)
      Ishikawa, A., Tanahashi, T., Kodama. H.
    • Journal Title

      Anim.Sci.J.

      Volume: 82 Issue: 2 Pages: 209-214

    • DOI

      10.1111/j.1740-0929.2010.00842.x

    • NAID

      10030376076

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Intersubspecific subcongenic mouse strain analysis reveals closely linked QTLs with opposite effects on body weight2011

    • Author(s)
      Mollah, Md.B.R., Ishikawa, A.
    • Journal Title

      Mamm.Genome

      Volume: 22 Issue: 5-6 Pages: 282-289

    • DOI

      10.1007/s00335-011-9323-9

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A wild derived quantitative trait locus on mouse chromosome 2 prevents obesity2010

    • Author(s)
      Mollah, Md. B. R.、Ishikawa, A
    • Journal Title

      BMC Genetics

      Volume: 11 Pages: 84-84

    • Related Report
      2013 Final Research Report
    • Peer Reviewed
  • [Journal Article] A wild derived quantitative trait locus on mouse chromosome 2 prevents obesity2010

    • Author(s)
      Mollah, Md.B.R., Ishikawa, A.
    • Journal Title

      RMC Genetics

      Volume: 11 Pages: 84-84

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] マウス第2染色体上の体重・肥満QTLが存在するコンジェニック領域のエクソーム解析2013

    • Author(s)
      石川明
    • Organizer
      第60回日本実験動物学会総会
    • Place of Presentation
      つくば国際会議場(つくば市)
    • Related Report
      2013 Final Research Report
  • [Presentation] マウス白色脂肪組織重量QTLが存在するサブコンジェニック領域のRNA-seq解析2013

    • Author(s)
      石川明
    • Organizer
      日本畜産学会第116回大会
    • Place of Presentation
      安田女子大学(広島市)
    • Related Report
      2013 Final Research Report
  • [Presentation] マウス白色脂肪組織重量QTLが存在するサブコンジェニック領域のRNA-seq解析2013

    • Author(s)
      石川 明
    • Organizer
      日本畜産学会第116回大会
    • Place of Presentation
      安田女子大学
    • Related Report
      2012 Annual Research Report
  • [Presentation] マウス第2染色体上の体重・肥満QTLが存在するコンジェニック領域のエクソーム解析2013

    • Author(s)
      石川 明
    • Organizer
      第60回日本実験動物学会総会
    • Place of Presentation
      つくば国際会議場
    • Related Report
      2012 Annual Research Report
  • [Presentation] Improved mapping of a body weight QTL on mouse chromosome 2 discovered from wild Mus musculus castaneus2012

    • Author(s)
      Ishikawa, A.、Okuno, S
    • Organizer
      The Fourth International Conference of Quantitative Genetics
    • Place of Presentation
      Edinburgh International Conference Centre (Edinburgh, UK)
    • Related Report
      2013 Final Research Report
  • [Presentation] Improved mapping of a body weight QTL on mouse chromosome 2 discovered from wild Mus musculus castaneus.2012

    • Author(s)
      Ishikawa, A. and Okuno, S.
    • Organizer
      The Fourth International Conference of Quantitative Genetics
    • Place of Presentation
      Edinburgh International Conference Centre
    • Related Report
      2012 Annual Research Report
  • [Presentation] 量的形質の遺伝的構造:マウス成長関連形質のQTL解析から学んだこと2011

    • Author(s)
      石川明
    • Organizer
      第17回動物遺伝育種シンポジウム「動物ゲノム解析と新たな家畜育種戦略」
    • Place of Presentation
      広島大学(東広島市)
    • Year and Date
      2011-11-20
    • Related Report
      2013 Final Research Report
    • Invited
  • [Presentation] 量的形質の遺伝的構造:マウス成長関連形質のQTL解析から学んだこと2011

    • Author(s)
      石川明
    • Organizer
      第17回動物遺伝育種シンポジウム「動物ゲノム解析と新たな家畜育種戦略」
    • Place of Presentation
      広島大学(東広島市)(招待講演)
    • Year and Date
      2011-11-20
    • Related Report
      2011 Annual Research Report
  • [Presentation] 密接に連鎖したマウス体重QTLsは正反対の遺伝子効果をもつ2011

    • Author(s)
      石川明、モハンマドバズルラハマンモラ
    • Organizer
      日本動物遺伝育種学会第12回大会
    • Place of Presentation
      広島大学(東広島市)
    • Year and Date
      2011-11-19
    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Presentation] マウス白色脂肪組織重量QTLのファインマッピングと家畜相同染色体領域2011

    • Author(s)
      石川明、モハンマドバズルラハマンモラ
    • Organizer
      日本畜産学会第114回大会
    • Place of Presentation
      帯広畜産大学(十和田市)
    • Year and Date
      2011-08-27
    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Presentation] Fine mapping and candidate gene analysis of an obesity quantitative trait locus on mouse chromosome 22011

    • Author(s)
      Ishikawa, A.、Mollah, Md. B. R
    • Organizer
      Mouse Genetics 2011 Conference
    • Place of Presentation
      Omni Shoreham Hotel (Washington D.C., USA)
    • Year and Date
      2011-06-25
    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Presentation] 野生キャスタネウスマウス由来の第2染色体上のQTLは肥満抵抗性を示す2011

    • Author(s)
      モハンマドバズルラハマンモラ、石川明
    • Organizer
      第58回日本実験動物学会総会
    • Place of Presentation
      タワーホール船堀(東京都)
    • Year and Date
      2011-05-26
    • Related Report
      2013 Final Research Report 2011 Annual Research Report
  • [Presentation] コンジェニックマウス系統解析による雑種強勢QTLのファインマッピング2010

    • Author(s)
      石川明
    • Organizer
      日本動物遺伝育種学会第11回年次大会
    • Place of Presentation
      (独)家畜改良センター本所講堂(福島県)
    • Related Report
      2013 Final Research Report
  • [Presentation] マウスの体重を統御するヘテローシスQTLのファインマッピング2010

    • Author(s)
      石川明
    • Organizer
      日本遺伝学会第82回大会
    • Place of Presentation
      北海道大学高等教育機能開発センター(札幌市)
    • Related Report
      2013 Final Research Report 2010 Annual Research Report
  • [Presentation] コンジェニックマウス系統解析による雑種強勢QTLのファインマッピング2010

    • Author(s)
      石川明
    • Organizer
      日本動物遺伝育種学会第11回年次大会
    • Place of Presentation
      独立行政法人家畜改良センター本所講堂(福島県)
    • Related Report
      2010 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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