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Study of Catalytic Mechanism of Hydrogen Activation by Hydrogenase using Neutron Crystal Structure Analysis

Research Project

Project/Area Number 22657031
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field Structural biochemistry
Research InstitutionUniversity of Hyogo

Principal Investigator

HIGUCHI Yoshiki  兵庫県立大学, 大学院・生命理学研究科, 教授 (90183574)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥3,420,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥420,000)
Fiscal Year 2011: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2010: ¥1,600,000 (Direct Cost: ¥1,600,000)
Keywordsタンパク質 / 中性子結晶解析 / 水素代謝 / 反応機構 / ヒドロゲナーゼ / Ni酵素 / プロトン経路
Research Abstract

The perfectly deuterated[NiFe] hydrogenase was tried to prepare by inoculating the sulfate-reducing bacterium in the deuterated media in 2010.However, it was not successful to obtain enough amount of the protein sample for crystallization trial. In 2011-2012, the ordinary(not deuterated) hydrogenase was tried to crystallize using deuterated precipitant in deuterated buffer solution. We have succeeded in preparation of a single crystal with a volume of 4 mm^3.This crystal gave a neutron diffraction pattern at 5.0 Aresolution at 100 K using the neutron beam at Japan Atomic Energy Research Institute. In addition, some parameters for diffraction experiment for large single crystals of[NiFe] hydrogenase at cryo-temperature have been found.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (94 results)

All 2012 2011 2010

All Journal Article (35 results) (of which Peer Reviewed: 35 results) Presentation (54 results) Book (5 results)

  • [Journal Article] An O-Centered Structure of the Trinuclear Copper Center in the Cys500Ser/Glu506Gln Mutant of CueO and Structural Changes in Low to High X-Ray Dose Conditions2012

    • Author(s)
      H.Shomura, et al
    • Journal Title

      Protein Science

      Volume: 21 Issue: 5 Pages: 707-716

    • DOI

      10.1002/pro.2058

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] An O-Centered Structure of the Trinuclear Copper Center in the Cys500Ser/Glu506Gln Mutant of CueO and Structural Changes in Low to High X-Ray Dose Conditions2012

    • Author(s)
      H.Komori, et al
    • Journal Title

      Angewandte Chemie

      Volume: 51 Issue: 8 Pages: 1861-1864

    • DOI

      10.1002/anie.201107739

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] The Three-dimensional Structure of Nylon Hydrolase and the Mechanism of Nylon-6 Hydrolysis2012

    • Author(s)
      S.Negoro, et al
    • Journal Title

      J.Biol.Chem.

      Volume: 287 Issue: 7 Pages: 5079-5090

    • DOI

      10.1074/jbc.m111.321992

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Structural Basis for a[4Fe-3S] Cluster in the Oxygen-tolerant Membrane-bound[Ni-Fe]-hydrogenase2011

    • Author(s)
      Y. Shomura, K. Yoon, H. Nishihara, Y. Higuchi
    • Journal Title

      Nature

      Volume: 479 Issue: 7372 Pages: 253-257

    • DOI

      10.1038/nature10504

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and Preliminary X-ray Diffraction Analysis of Membrane-bound Respiratory [NiFe] Hydrogenase from Hydrogenovibrio marinus2011

    • Author(s)
      Y.Shomura, et al
    • Journal Title

      Acta Crystallgor

      Volume: 67 Issue: 7 Pages: 827-829

    • DOI

      10.1107/s1744309111019804

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Molecular Dynamics Studies on Mutational Structures of a Nylon-6 Byproduct-degrading Enzyme2011

    • Author(s)
      T.Baba, et al
    • Journal Title

      Chem.Phys.Lett.

      Volume: 507 Issue: 1-3 Pages: 157-161

    • DOI

      10.1016/j.cplett.2011.03.046

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] How Coenzyme B12-dependent Ethanolamine Ammonialyase Deals with Both Enantiomers of 2-Amino-1-propanol as Substrates: Structure-based Rationalization2011

    • Author(s)
      N. Shibata, Y. Higuchi and T. Toraya
    • Journal Title

      Biochemistry

      Volume: 50 Issue: 4 Pages: 591-598

    • DOI

      10.1021/bi101696h

    • Related Report
      2011 Final Research Report 2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and X-ray Diffraction Analysis of Nylon Oligomer Hydrolase (NylC) from Agromyces sp.KY5R2011

    • Author(s)
      K.Yasuhira, et al
    • Journal Title

      Acta Crystallgor

      Volume: 67 Issue: 8 Pages: 892-895

    • DOI

      10.1107/s1744309111022858

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystallographic Characterization of the DIX Domain of the Wnt Signalling Positive Regulator Ccd12011

    • Author(s)
      S.Terawaki, et al
    • Journal Title

      Acta Crystallgor

      Volume: F67 Issue: 7 Pages: 758-761

    • DOI

      10.1107/s1744309111016526

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Positively Charged Domain Located Downstream of PIP Box, Together with TD Amino Acids within PIP Box, is Important for CRL4^<Cdt2>-mediated Proteolysis2011

    • Author(s)
      M. Michishita, A. Morimoto, T. Ishii, H. Komori, Y. Shiomi, Y. Higuchi and H. Nishitani
    • Journal Title

      Genes to Cells

      Volume: 16 Issue: 1 Pages: 12-22

    • DOI

      10.1111/j.1365-2443.2010.01464.x

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Hiraki Localization of chondromodulin-I at the feto-maternal interface and its inhibitory actions on trophoblast invasion in vitro2011

    • Author(s)
      Miura, C. Shukunami, K. Mitsui, J. Kondo, Y
    • Journal Title

      BMC Cell Biol

      Volume: 12 Issue: 1 Pages: 34-34

    • DOI

      10.1007/s00774-010-0193-0

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Role of π-Electron Systems in Stabilization of the Oxidized Tetraheme Architecture in Cytochrome c_32011

    • Author(s)
      Y.Takayama, et al
    • Journal Title

      Bull.Chem.Soc.Jpn.

      Volume: 84 Issue: 10 Pages: 1096-1101

    • DOI

      10.1246/bcsj.20110039

    • NAID

      130004152811

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] A Functional Role of the Glycosylated N-terminal Domain of Chondromodulin-I2011

    • Author(s)
      J.Kondo, et al.
    • Journal Title

      J.Bone Miner.Metab.

      Volume: 29 Pages: 23-30

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Positively Charged Domain Located Downstream of PIP Box, Together with TD Amino Acids within PIP Box, is Important for CRL4^<Cdt2>-mediated Proteolysis2011

    • Author(s)
      M.Michishita, et al.
    • Journal Title

      Gene to Cells

      Volume: 16 Pages: 12-22

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Concerto Catalysis. Harmonising [NiFe] Hydrogenase and NiRu Model Catalysts2010

    • Author(s)
      K. Ichikawa, K. Nonaka, T. Matsumoto,B. Kure, K-S. Yoon, Y. Higuchi, T. Yagi, S. Ogo
    • Journal Title

      Concerto Catalysis. Harmonising [NiFe] Hydrogenase and NiRu Model Catalysts

      Volume: 39 Issue: 12 Pages: 2993-2994

    • DOI

      10.1039/b926061g

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystal Structure Analysis of Bacillus subtilis Ferredoxin-NADP+ Oxidoreductase and the Structural Basis for Its Substrate Selectivity2010

    • Author(s)
      H. Komori, D. Seo, T. Sakurai and Y. Higuchi
    • Journal Title

      Protein Science

      Volume: 19(12) Issue: 12 Pages: 2279-2290

    • DOI

      10.1002/pro.508

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Cytochrome c polymerization by successive domain swapping at the C-terminal helix2010

    • Author(s)
      S. Hirota, Y. Hattori, S. Nagao, M. Taketa, H. Komori, H. Kamikubo, Z. Wang, I. Takahashi, S. Negi, Y. Sugiura, M. Kataoka, Y. Higuchi
    • Journal Title

      Pro. Natl. Acad. Sci

      Volume: 107(29) Issue: 29 Pages: 12854-12859

    • DOI

      10.1073/pnas.1001839107

    • NAID

      120005716875

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystal Structures of Ethanolamine Ammonia-lyase complexed with Coenzyme B_12 Analogs and Substrates2010

    • Author(s)
      N. Shibata, H. Tamagaki, N. Hieda, K. Akita, H. Komori, Y. Shomura, S. Terawaki, K. Mori, N. Yasuoka, Y. Higuchi, and T. Toraya
    • Journal Title

      J. Biol. Chem

      Volume: 285 (34) Issue: 34 Pages: 26484-26493

    • DOI

      10.1074/jbc.m110.125112

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Structure and Molecular Evolution of Multicopper Blue Proteins2010

    • Author(s)
      H. Komori and Y. Higuchi
    • Journal Title

      BIOMOLECULAR CONCEPTS

      Volume: 1 Issue: 1 Pages: 31-40

    • DOI

      10.1515/bmc.2010.004

    • Related Report
      2011 Final Research Report 2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Enzymatic Synthesis of Nylon-6 units in Organic Solvent Contained Low-water: Structural Requirement of 6-aminohexanoate-dimer Hydrolase for Efficient Amide Synthesis2010

    • Author(s)
      Y. Kawashima, K. Yasuhira, N. Shibata,Y Matsuura, Y. Tanaka, M. Taniguchi, Y. Miyoshi, M. Takeo, D. Kato, Y. Higuchi and S. Negoro
    • Journal Title

      J. Mol. Cat

      Volume: B64 Issue: 1-2 Pages: 81-88

    • DOI

      10.1016/j.molcatb.2010.02.006

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] The PHCCEx Domain of Tiam1/2 is a Novel Protein- and Membrane-binding Module2010

    • Author(s)
      S. Terawaki, K. Kitano, T. Mori, Y. Zhai, Y. Higuchi, N. Itoh, T. Watanabe, K. Kaibuchi and T. Hakoshima
    • Journal Title

      EMBO J

      Volume: 29 Issue: 1 Pages: 236-250

    • DOI

      10.1038/emboj.2009.323

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] X-ray Crystallographic Analysis of the 6-aminohexanoate Cyclic Dimer Hydrolase: Catalytic Mechanism and Evolution of an Enzyme Responsible for Nylon-6 Byproduct Degradation2010

    • Author(s)
      K. Yasuhira, N. Shibata, G. Mongami, Y. Uedo, Y. Atsumi, Y. Kawashima, A. Hibino, Y. Tanaka, Y-H. Lee, D. Kato, M. Takeo, Y. Higuchi, and S. Negoro
    • Journal Title

      J. Biol. Chem

      Volume: 285 Issue: 2 Pages: 1239-1248

    • DOI

      10.1074/jbc.m109.041285

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Purification, Crystallization and Preliminary X-ray Analysis of the Dissimilatory Sulfite Reductase from Desulfovibrio vulgaris Miyazaki F2010

    • Author(s)
      H. Ogata, Y. Shomura, A.G. Agrawal, A.P. Kaur, W. Gartner, Y. Higuchi and W. Lubitz
    • Journal Title

      Acta Crystallogr.

      Volume: F66 Issue: 11 Pages: 1470-1472

    • DOI

      10.1107/s1744309110033191

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and Preliminary X-ray Analysis of Dimeric and Trimeric Cytochromes c from Horse Heart2010

    • Author(s)
      M. Taketa, H. Komori, Y. Hattori, S. Nagao, S. Hirota and Y. Higuchi
    • Journal Title

      Acta Crystallogr

      Volume: F66 Pages: 1477-1479

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Expression, Crystallization and Preliminary X-ray Crystallographic Study of Ethanolamine Ammonia-lyase from Escherichia coli2010

    • Author(s)
      N. Shibata, H. Tamagaki, S. Ohtsuki, N. Hieda, K. Akita, H. Komori, Y. Shomura, S. Terawaki, T. Toraya, N. Yasuoka and Y. Higuchi
    • Journal Title

      Acta Crystallogr.

      Volume: F66 Issue: 6 Pages: 709-711

    • DOI

      10.1107/s1744309110014478

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and Preliminary X-ray Analysis of NADH : rubredoxin Oxidoreductase from Clostridium acetobutylicum2010

    • Author(s)
      K. Nishikawa, Y. Shomura, S. Kawasaki, Y. Niimura and Y. Higuchi
    • Journal Title

      Acta Crystallogr

      Volume: F66 Pages: 23-25

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and Preliminary X-ray Analysis of NADH:rubredoxin Oxidoreductase from Clostridium acetobutylicum2010

    • Author(s)
      K. Nishikawa, Y. Shomura, S. Kawasaki, Y. Niimura and Y. Higuchi
    • Journal Title

      Acta Crystallogr

      Volume: F66 Issue: 1 Pages: 23-25

    • DOI

      10.1107/s1744309109047162

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and Preliminary X-ray Studies of Ferredoxin-NADP+ Oxidoreductase Encoded by Bacillus subtilis yumC2010

    • Author(s)
      H. Komori, D. Seo, T. Sakurai, and Y. Higuchi
    • Journal Title

      Acta Crystallogr

      Volume: F66 Issue: 3 Pages: 301-303

    • DOI

      10.1107/s1744309110000151

    • NAID

      120002086442

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Enzymatic Synthesis of Nylon-6 units in Organic Solvent Contained Low-water : Structural Requirement of 6-aminohexanoate-dimer Hydrolase for Efficient Amide Synthesis2010

    • Author(s)
      Y.Kawashima, et al.
    • Journal Title

      J.Mol.Cat.B

      Volume: 64 Pages: 81-88

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Expression, Crystallization and Preliminary X-ray Crystallographic Study of Ethanolamine Ammonia-lyase from Escherichia coli2010

    • Author(s)
      N.Shibata, et al.
    • Journal Title

      Acta Crystallogr.

      Volume: F66 Pages: 709-711

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystal Structures of Ethanolamine Ammonia-lyase complexed with Coenzyme B_<12> Analogs and Substrates2010

    • Author(s)
      N.Shibata, et al.
    • Journal Title

      J.Biol.Chem.

      Volume: 285 Pages: 26484-26493

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cytochrome c polymerization by successive domain swapping at the C-terminal helix2010

    • Author(s)
      S.Hirota, et al.
    • Journal Title

      Proc.Natl.Acad.Sci.

      Volume: 107 Pages: 12854-12859

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Purification, Crystallization and Preliminary X-ray Analysis of the Dis similatory Sulfite Reductase from Desulfovibrio vulgaris Miyazaki F2010

    • Author(s)
      H.Ogata, et al.
    • Journal Title

      Acta Crystallogr.

      Volume: F66 Pages: 1470-1472

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystallization and Preliminary X-ray Analysis of Dimeric and Trimeric Cytochromes c from Horse Heart2010

    • Author(s)
      M.Taketa, et al.
    • Journal Title

      Acta Crystallogr.

      Volume: F66 Pages: 1477-1479

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Crystal Structure Analysis of Bacillus subtilis Ferredoxin-NADP Oxid oreductase and the Structural Basis for Its Substrate Selectivity2010

    • Author(s)
      H.Komori, et al.
    • Journal Title

      Protein Science

      Volume: 19 Pages: 2279-2290

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] 酸素耐性膜結合型[NiFe]ヒドロゲナーゼのX線結晶構造解析-水素エネルギー利用に向けた基礎科学的研究-2011

    • Author(s)
      樋口芳樹
    • Organizer
      関西サイエンスフォーラム
    • Place of Presentation
      リーガロイヤルNCB(大阪)
    • Year and Date
      2011-11-29
    • Related Report
      2011 Final Research Report
  • [Presentation] 酸素耐性膜結合型[NiFe]ヒドロゲナーゼのX線結晶構造解析-水素エネルギー利用に向けた基礎科学的研究-2011

    • Author(s)
      樋口芳樹
    • Organizer
      関西サイエンスフォーラム
    • Place of Presentation
      リーガロイヤルNCB(大阪府)(招待講演)
    • Year and Date
      2011-11-29
    • Related Report
      2011 Annual Research Report
  • [Presentation] 結晶構造に基づくトキイロヒラタケ由来色素タンパク質の遺伝子クローニング2011

    • Author(s)
      柴田直樹, 樋口芳樹
    • Organizer
      日本結晶学会年会
    • Place of Presentation
      北海道大学(北海道)
    • Year and Date
      2011-11-24
    • Related Report
      2011 Final Research Report
  • [Presentation] 翻訳終結因子RF3のX線結晶解析2011

    • Author(s)
      木平清人, 樋口芳樹
    • Organizer
      日本結晶学会年会
    • Place of Presentation
      北海道大学(北海道)
    • Year and Date
      2011-11-24
    • Related Report
      2011 Final Research Report
  • [Presentation] ゼータサイザーでタンパク質のオリゴマー化を解析する2011

    • Author(s)
      樋口芳樹
    • Organizer
      日本結晶学会年会
    • Place of Presentation
      北海道大学(北海道)
    • Year and Date
      2011-11-24
    • Related Report
      2011 Final Research Report
  • [Presentation] ゼータサイザーでタンパク質のオリゴマー北を解析する2011

    • Author(s)
      樋口芳樹
    • Organizer
      日本結晶学会年会
    • Place of Presentation
      北海道大学(北海道)(招待講演)
    • Year and Date
      2011-11-24
    • Related Report
      2011 Annual Research Report
  • [Presentation] マルチ銅酸化酵素の構造解析2011

    • Author(s)
      小森博文, 樋口芳樹
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都国際会館(京都)
    • Year and Date
      2011-09-23
    • Related Report
      2011 Final Research Report
  • [Presentation] マルチ銅酸化酵素の構造解析2011

    • Author(s)
      小森博文, 等
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都国際会議場(京都府)
    • Year and Date
      2011-09-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] High-Resolution X-Ray Crystal Structure Analysis of a Multicopper Oxidase, CueO and Structure Change in the Trinuclear Copper Center by Hydrated Electron2011

    • Author(s)
      H. Komori, Y. Higuchi, et al.
    • Organizer
      錯体化学会第61回討論会
    • Place of Presentation
      岡山大学(岡山)
    • Year and Date
      2011-09-18
    • Related Report
      2011 Final Research Report
  • [Presentation] Structural study of the O_2-tolerant[NiFe] hydrogenase2011

    • Author(s)
      Y. Shomura, Y. Higuchi, et al.
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学(兵庫県)
    • Year and Date
      2011-09-17
    • Related Report
      2011 Final Research Report
  • [Presentation] Structural study of the O_2-tolerant [NiFe] hydrogenase2011

    • Author(s)
      Y.Shomura, et al
    • Organizer
      第49回日本生物物理学会年会
    • Place of Presentation
      兵庫県立大学(兵庫県)
    • Year and Date
      2011-09-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] シトクロムc-552の多量体生成と二量体構造2011

    • Author(s)
      林有吾, 樋口芳樹
    • Organizer
      第5回バイオ関連化学シンポジウム
    • Place of Presentation
      つくば国際会館(茨城県)
    • Year and Date
      2011-09-14
    • Related Report
      2011 Final Research Report
  • [Presentation] シトクロムc-552の多量体生成と二量体構造2011

    • Author(s)
      林有吾, 等
    • Organizer
      第5回バイオ関連化学シンポジウム
    • Place of Presentation
      つくば国際会議場(茨城県)
    • Year and Date
      2011-09-14
    • Related Report
      2011 Annual Research Report
  • [Presentation] Crystal structure analysis of release factor 32011

    • Author(s)
      K. Kihira, Y. Higuchi, et al.
    • Organizer
      XXII Congress and General Assembly of International Union of Crystallography
    • Place of Presentation
      Madrid(Spain)
    • Year and Date
      2011-08-28
    • Related Report
      2011 Final Research Report
  • [Presentation] Crystal structure analysis of release factor 32011

    • Author(s)
      K.Kihira, et al
    • Organizer
      XXII Congress and General Assembly of International Union of Crystallography
    • Place of Presentation
      Madrid (Spain)
    • Year and Date
      2011-08-28
    • Related Report
      2011 Annual Research Report
  • [Presentation] Primer design for cDNA synthesis based on the crystal structure2011

    • Author(s)
      N. Shibata, Y. Higuchi, et al.
    • Organizer
      XXII Congress and General Assembly of International Union of Crystallography
    • Place of Presentation
      Madrid(Spain)
    • Year and Date
      2011-08-27
    • Related Report
      2011 Final Research Report
  • [Presentation] Primer design for cDNA synthesis based on the crystal structure2011

    • Author(s)
      N.Shibata, Y.Higuchi
    • Organizer
      XXII Congress and General Assembly of International Union of Crystallography
    • Place of Presentation
      Madrid (Spain)
    • Year and Date
      2011-08-27
    • Related Report
      2011 Annual Research Report
  • [Presentation] ウマシトクロムcおよび緑膿菌シトクロムc_<551>の多量体形成2011

    • Author(s)
      廣田俊, 樋口芳樹
    • Organizer
      第38回生体分子科学討論会
    • Place of Presentation
      つくば国際会館,茨城県
    • Year and Date
      2011-06-23
    • Related Report
      2011 Final Research Report
  • [Presentation] ウマシトクロムcおよび緑膿菌シトクロムc_<551>の多量体形成2011

    • Author(s)
      廣田俊, 等
    • Organizer
      第38回生体分子科学討論会
    • Place of Presentation
      茨城大学(茨城県)
    • Year and Date
      2011-06-23
    • Related Report
      2011 Annual Research Report
  • [Presentation] ウマミオグロビン二量体の立体構造および酸素結合特性2011

    • Author(s)
      長尾聡, 樋口芳樹
    • Organizer
      日本化学会第91春期年会
    • Place of Presentation
      神奈川大学(神奈川県)
    • Year and Date
      2011-03-25
    • Related Report
      2011 Final Research Report
  • [Presentation] 好熱菌由来シトクロムc552二量体の構造と安定性2011

    • Author(s)
      林有吾, 樋口芳樹
    • Organizer
      日本化学会第91春期年会
    • Place of Presentation
      神奈川大学(神奈川県)
    • Year and Date
      2011-03-25
    • Related Report
      2011 Final Research Report
  • [Presentation] Can we elucidate the reaction mechanism of[NiFe] hydrogenase by neutron diffraction study2011

    • Author(s)
      Y. Higuchi
    • Organizer
      Neutron Structural Biology-Hydration Structure in Proteins-
    • Place of Presentation
      日本原子力開発研究機構(茨城県)
    • Year and Date
      2011-03-04
    • Related Report
      2011 Final Research Report
  • [Presentation] 中性子構造化学でヒドロゲナーゼの水素分子活性化機構は理解できるか?2011

    • Author(s)
      樋口芳樹
    • Organizer
      中性子構造生物学およびタンパク質水和構造に関するシンポジウム
    • Place of Presentation
      水戸
    • Year and Date
      2011-03-04
    • Related Report
      2010 Annual Research Report
  • [Presentation] Structural Basis for the Reaction Mechanism of Dissimilatory Sulfite Reductase2011

    • Author(s)
      Y. Shomura Y. Higuchi, et al.
    • Organizer
      International Symposium on Chemistry of Reductases IV
    • Place of Presentation
      名古屋大学(愛知県)
    • Related Report
      2011 Final Research Report
  • [Presentation] Structural Basis for the Apparent lack of Stereospecificity in Coenzyme B_<12>-dependent Radical Enzyme Ethanolamine Ammonia-lyase2011

    • Author(s)
      N. Shibata, Y. Higuchi, et al.
    • Organizer
      International Symposium on Chemistry of Reductases IV
    • Place of Presentation
      名古屋大学(愛知県)
    • Related Report
      2011 Final Research Report
  • [Presentation] Structure and molecular evolution of multicopper blue proteins2011

    • Author(s)
      H. Komori and Y. Higuchi
    • Organizer
      International Symposium on Chemistry of Reductases IV
    • Place of Presentation
      名古屋大学(愛知県)
    • Related Report
      2011 Final Research Report
  • [Presentation] Crystallization and X-ray Analysis of ATP-sulfurylase from Sulfate-reducing Bacteria2011

    • Author(s)
      M. Taketa, Y. Shomura and Y. Higuchi
    • Organizer
      International Symposium on Chemistry of Reductases IV
    • Place of Presentation
      名古屋大学(愛知県)
    • Related Report
      2011 Final Research Report
  • [Presentation] Expression and Purification of the Rab GTPase-effector Complex2011

    • Author(s)
      S. Terawaki and Y. Higuchi
    • Organizer
      International Symposium on Chemistry of Reductases IV
    • Place of Presentation
      名古屋大学(愛知県)
    • Related Report
      2011 Final Research Report
  • [Presentation] Structural Basis for the Reaction Mechanism of Dissimilatory Sulfite Reductase2011

    • Author(s)
      Y.Shomura, et al.
    • Organizer
      International Symposium on Chemistry of Reductases IV
    • Place of Presentation
      名古屋
    • Related Report
      2010 Annual Research Report
  • [Presentation] Crystallization and X-ray Analysis of ATP-sulfurylase from Sulfate-reducing Bacteria2011

    • Author(s)
      M.Taketa, et al.
    • Organizer
      International Symposium on Chemistry of Reductases IV
    • Place of Presentation
      名古屋
    • Related Report
      2010 Annual Research Report
  • [Presentation] B12-補酵素関与エタノールアミアンモニアリアーゼの立体構造に基づく立体化学経路の解明2010

    • Author(s)
      柴田直樹, 樋口芳樹
    • Organizer
      第33回日本分子生物学会年会,第83回日本生化学会大会合同大会
    • Place of Presentation
      ポートピアホテル(兵庫県)
    • Year and Date
      2010-12-07
    • Related Report
      2011 Final Research Report
  • [Presentation] Wntシグナル伝達で機能するCCD1 DIXドメインのX線結晶構造解析2010

    • Author(s)
      寺脇慎一, 樋口芳樹
    • Organizer
      第33回日本分子生物学会年会,第83回日本生化学会大会合同大会
    • Place of Presentation
      ポートピアホテル(兵庫県)
    • Year and Date
      2010-12-07
    • Related Report
      2011 Final Research Report
  • [Presentation] Enzymatic Degradation and Synthesis of Nylon-6 Related Compounds2010

    • Author(s)
      S. Negoro, Y. Higuchi, et al.
    • Organizer
      International Symposium on BioPolymers 2010
    • Place of Presentation
      Stuttgart(Germany)
    • Year and Date
      2010-10-04
    • Related Report
      2011 Final Research Report
  • [Presentation] Enzymatic Degradation and Synthesis of Nylon-6 Related Compounds.2010

    • Author(s)
      S.Negoro, et al.
    • Organizer
      International Symposium on BioPolymers 2010
    • Place of Presentation
      Stuttgart
    • Year and Date
      2010-10-04
    • Related Report
      2010 Annual Research Report
  • [Presentation] Cytochrome c Polymerization by Successive Domain Swapping at the C-terminal Helix2010

    • Author(s)
      S. Hirota, Y. Higuchi, et al.
    • Organizer
      日本生物物理学会第48回年会
    • Place of Presentation
      東北大学(宮城県)
    • Year and Date
      2010-09-22
    • Related Report
      2011 Final Research Report
  • [Presentation] Strusctural Analysis of Releasae Factor 32010

    • Author(s)
      K. Kihira, Y. Higuchi, et al.
    • Organizer
      日本生物物理学会第48回年会
    • Place of Presentation
      東北大学(宮城県)
    • Year and Date
      2010-09-22
    • Related Report
      2011 Final Research Report
  • [Presentation] Cytochrome c Polymerization by Successive Domain Swapping at the C-terminal Helix2010

    • Author(s)
      S.Hirota, et al.
    • Organizer
      日本生物物理学会第48回年会
    • Place of Presentation
      仙台
    • Year and Date
      2010-09-22
    • Related Report
      2010 Annual Research Report
  • [Presentation] マルチ銅酸化酵素の構造解析2010

    • Author(s)
      小森博文, 樋口芳樹
    • Organizer
      生物高分子学会2010年度大会
    • Place of Presentation
      兵庫県立大学(兵庫県)
    • Year and Date
      2010-09-10
    • Related Report
      2011 Final Research Report
  • [Presentation] ナイロンオリゴマ分解酵素の精密構造解析~新規酵素機能の創成を目指して~2010

    • Author(s)
      樋口芳樹
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      北海道大学(北海道)
    • Year and Date
      2010-06-18
    • Related Report
      2011 Final Research Report
  • [Presentation] ナイロンオリゴマ-分解酵素の精密構造解析2010

    • Author(s)
      樋口芳樹
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      札幌
    • Year and Date
      2010-06-18
    • Related Report
      2010 Annual Research Report
  • [Presentation] Wntシグナル制御因子Dishevelled-DIXドメインのX線構造解析2010

    • Author(s)
      柴田直樹, 樋口芳樹
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      北海道大学(北海道)
    • Year and Date
      2010-06-16
    • Related Report
      2011 Final Research Report
  • [Presentation] Wntシグナル伝達機構ではたらくCCD1の構造化学的研究2010

    • Author(s)
      寺脇慎一, 樋口芳樹
    • Organizer
      第10回日本蛋白質科学会年会
    • Place of Presentation
      北海道大学(北海道)
    • Year and Date
      2010-06-16
    • Related Report
      2011 Final Research Report
  • [Presentation] 枯草菌由来フェレドキシン-NADPH還元酵素のX線結晶構造解析2010

    • Author(s)
      小森博文、樋口芳樹
    • Organizer
      2010年度日本結晶学会年会
    • Place of Presentation
      大阪大学(大阪府)
    • Related Report
      2011 Final Research Report
  • [Presentation] 膜結合型[NiFe]ヒドロゲナーゼのX線結晶構造解析2010

    • Author(s)
      庄村康人, 樋口芳樹
    • Organizer
      2010年度日本結晶学会年会
    • Place of Presentation
      大阪大学(大阪府)
    • Related Report
      2011 Final Research Report
  • [Presentation] Wntシグナル伝達で機能するCCD1のオリゴマー形成機構に関する構造学的研究2010

    • Author(s)
      寺脇慎一, 樋口芳樹
    • Organizer
      2010年度日本結晶学会年会
    • Place of Presentation
      大阪大学(大阪府)
    • Related Report
      2011 Final Research Report
  • [Presentation] Basis for the Lack of Stereospecificity in Coenzyme B_<12>-dependent Ethanolamine ammonia-lyase2010

    • Author(s)
      N. Shibata, Y. Higuchi, et al.
    • Organizer
      The 10th Conference of the Asian Crystallographic Association
    • Place of Presentation
      Pusan(Korea)
    • Related Report
      2011 Final Research Report
  • [Presentation] The Role of theπ-electron System in Regulation of Reduction Potentials of Tetraheme Cytochrome c_32010

    • Author(s)
      H. Akutsu, Y. Higuchi, et al.
    • Organizer
      The 10th Conference of the Asian Crystallographic Association
    • Place of Presentation
      Pusan(Korea)
    • Related Report
      2011 Final Research Report
  • [Presentation] Improved Technologies for High-resolution X-ray Crystallography2010

    • Author(s)
      H. Tanaka, Y. Higuchi, et al.
    • Organizer
      The 10th Conference of the Asian Crystallographic Association
    • Place of Presentation
      Pusan(Korea)
    • Related Report
      2011 Final Research Report
  • [Presentation] Basis for the Lack of Stereospecificity in Coenzyme B_<12>-dependent Ethanolamine ammonia-lyase2010

    • Author(s)
      N.Shibata, et al.
    • Organizer
      The 10th Conference of the Asian Crystallographic Association
    • Place of Presentation
      Pusan
    • Related Report
      2010 Annual Research Report
  • [Presentation] The Role of the π-electron System in Regulation of Reduction Potentials of Tetraheme Cytochrome C_<3>2010

    • Author(s)
      H.Akutsu, et al.
    • Organizer
      The 10th Conference of the Asian Crystallographic Association
    • Place of Presentation
      Pusan
    • Related Report
      2010 Annual Research Report
  • [Presentation] Improved Technologies for High-resolution X-ray Crystallography2010

    • Author(s)
      H.Tanaka, et al.
    • Organizer
      The 10th Conference of the Asian Crystallographic Association
    • Place of Presentation
      Pusan
    • Related Report
      2010 Annual Research Report
  • [Presentation] 枯草菌由来フェレドキシン-NADPH還元酵素のX線結晶構造解析2010

    • Author(s)
      小森博文, et al.
    • Organizer
      2010年度日本結晶学会年会
    • Place of Presentation
      吹田
    • Related Report
      2010 Annual Research Report
  • [Presentation] 膜結合型[NiFe]ヒドロゲナーゼのX線結晶構造解析2010

    • Author(s)
      庄村康人, et al.
    • Organizer
      2010年度日本結晶学会年会
    • Place of Presentation
      吹田
    • Related Report
      2010 Annual Research Report
  • [Presentation] B12-補酵素関与エタノールアミアンモニアリアーゼの立体構造に基づく立体化学経路の解明2010

    • Author(s)
      柴田直樹, et al.
    • Organizer
      2010年度日本結晶学会年会
    • Place of Presentation
      吹田
    • Related Report
      2010 Annual Research Report
  • [Book] Structures of Dimeric and Trimeric Cytochrome c and Its Polymerization Mechanism, Spring-8 Research Frontiers20102011

    • Author(s)
      S. Hirota and Y. Higuchi
    • Related Report
      2011 Final Research Report
  • [Book] Structural and Functional Features of Hydrogenase Enzymes, Molecular Solar Biofuels2011

    • Author(s)
      W. Lubitz, H. Ogata, E. Reijerse and Y. Higuchi
    • Related Report
      2011 Final Research Report
  • [Book] 新規の鉄-硫黄クラスターが生み出すヒドロゲナーゼの酸素耐性機構,ライフサイエンス新着レビュー2011

    • Author(s)
      庄村康人, 樋口芳樹
    • URL

      http://first.lifesciencedb.jp/archives/3775.

    • Related Report
      2011 Final Research Report
  • [Book] 構造生物学2010

    • Author(s)
      樋口芳樹, 中川敦史
    • Total Pages
      253
    • Publisher
      共立出版
    • Related Report
      2011 Final Research Report
  • [Book] 構造生物学-原子構造からみた生命現象の営み2010

    • Author(s)
      樋口芳樹, 中川敦史
    • Total Pages
      253
    • Publisher
      共立出版株式会社
    • Related Report
      2010 Annual Research Report

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Published: 2010-08-23   Modified: 2016-04-21  

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