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Bioinformation Produced by Molecular Interactions in The Membrane Microdomains

Research Project

Project/Area Number 22659060
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeSingle-year Grants
Research Field General medical chemistry
Research InstitutionKochi University

Principal Investigator

HONKE Koichi  高知大学, 教育研究部・医療学系, 教授 (80190263)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥3,190,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥390,000)
Fiscal Year 2011: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2010: ¥1,500,000 (Direct Cost: ¥1,500,000)
Keywords生体分子医学 / 分子間相互作用 / 生体膜 / 質量分析 / 抗体医薬品 / プロテオーム / 生体分子
Research Abstract

In order to improve the recently established method to analyze molecular interactions in the plasma membranes, called EMARS, we developed the second generation labeling reagent and enabled to identify proteins labeled by the EMARS method by using mass spectrometry-based proteomics technology. Furthermore, we found changes in molecular interactions in the plasma membranes elicited by stimulations with extracellular matrix proteins or therapeutic antibodies and elucidated the involvement of novel molecules in the signal pathway leading to the biological effects.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (15 results)

All 2012 2011 2010

All Journal Article (7 results) (of which Peer Reviewed: 7 results) Presentation (7 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] A proteomics approach to the cell-surface interactome using the enzyme-mediated activation of radical sources reaction2012

    • Author(s)
      Jiang S, Kotani N, Ohnishi T, Miyagawa-Yamguchi A, Tsuda M, Yamashita R, Ishiura Y, Honke K
    • Journal Title

      Proteomics

      Volume: 12 Issue: 1 Pages: 54-62

    • DOI

      10.1002/pmic.201100551

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Spatiotemporally-regulated interaction betweenβ1 integrin and ErbB4 that is involved in fibronectin-dependent cell migration2011

    • Author(s)
      Yamashita R, Kotani N, Ishiura Y, Higashiyama S, Honke K
    • Journal Title

      J. Biochem

      Volume: 149 Issue: 3 Pages: 347-355

    • DOI

      10.1093/jb/mvq148

    • NAID

      10030584133

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] The enzyme-mediated activation of radical source reaction : a new approach to identify partners of a given molecule in membrane microdomains2011

    • Author(s)
      Honke K, Kotani N
    • Journal Title

      J. Neurochem

      Volume: 116 Issue: 5 Pages: 690-695

    • DOI

      10.1111/j.1471-4159.2010.07027.x

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Spatiotemporally-regulated interaction between β1 integrin and ErbB4 that is involved in fibronectin-dependent cell migration.2011

    • Author(s)
      Yamashita R, Kotani N, et al.
    • Journal Title

      J.Biochem.

      Volume: 149 Pages: 347-355

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The enzyme-mediated activation of radical source reaction : a new approach to identify partners of a given molecule in membrane microdomains.2011

    • Author(s)
      Honke K, Kotani N
    • Journal Title

      J.Neurochem.

      Volume: 116 Pages: 690-695

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Anomalous expression of Thy1(CD90) in B-cell lymphoma cells and proliferation inhibition by anti-Thy1 antibody treatment2010

    • Author(s)
      Ishiura Y, Kotani N, Yamashita R, Yamamoto H, Kozutsumi Y, Honke K
    • Journal Title

      Biochem. Biophys. Res. Commun

      Volume: 396 Pages: 329-334

    • URL

      http://dx.doi.org/10.1016/j.bbrc.2010.04.092

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Anomalous Expression of Thy1 (CD90) in B-Cell Lymphoma Cells and Proliferation Inhibition by Anti-Thy1 Antibody Treatment.2010

    • Author(s)
      Ishiura Y, Kotani N, et al.
    • Journal Title

      Biochem.Biophys.Res.Commun.

      Volume: 396 Pages: 329-334

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] Analysis of molecular clustering on the living cell membrane2011

    • Author(s)
      Honke K, Miyagawa-Yamaguchi A, Kotani N
    • Organizer
      Glycobiology Japan-Netherland Joint Seminar 2011
    • Place of Presentation
      名古屋大学
    • Year and Date
      2011-10-11
    • Related Report
      2011 Final Research Report
  • [Presentation] Analysis of molecular clustering on the living cell membrane2011

    • Author(s)
      Honke K, Miyagawa-Yamaguchi A, Kotani N
    • Organizer
      Glycobiology Japan-Netherland Joint Seminar 2011
    • Place of Presentation
      名古屋大学(招待講演)
    • Year and Date
      2011-10-11
    • Related Report
      2011 Annual Research Report
  • [Presentation] 抗体医薬の効能や安全性を向上させる分子標的治療の標的分子探索2011

    • Author(s)
      小谷典弘、本家孝一
    • Organizer
      第84回日本生化学会大会
    • Place of Presentation
      京都国際会議場
    • Year and Date
      2011-09-22
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] EMARS反応-生きている細胞の表面で任意の分子と会合する分子を同定する-2011

    • Author(s)
      本家孝一、小谷典弘
    • Organizer
      第61回日本電気泳動学会(JES)シンポジウム/第7回日本臨床プロテオーム研究会(JSCP) 2011連合大会
    • Place of Presentation
      山口大学
    • Year and Date
      2011-05-10
    • Related Report
      2011 Final Research Report
  • [Presentation] EMARS反応-生きている細胞の表面で任意の分子と会合する分子を同定する-2011

    • Author(s)
      本家孝一、小谷典弘
    • Organizer
      第61回日本電気泳動学会(JES)シンポジウム/第7回日本臨床プロテオーム研究会(JSCP)2011連合大会
    • Place of Presentation
      山口大学(招待講演)
    • Year and Date
      2011-05-10
    • Related Report
      2011 Annual Research Report
  • [Presentation] A new approach to identify partners of a given molecule in membrane domains2010

    • Author(s)
      Honke K, Kotani N
    • Organizer
      The 4th ISN Special Neurochemistry Conference on" Membrane Domains in CNS physiology and pathology"
    • Place of Presentation
      Erice, Sicily, Italy
    • Related Report
      2011 Final Research Report
  • [Presentation] A new approach to identify partners of a given molecule in membrane domains.2010

    • Author(s)
      Honke K, Kotani N
    • Organizer
      The 4th ISN Special Neurochemistry Conference on "Membrane Domains in CNS physiology and pathology"
    • Place of Presentation
      Erice, Sicily, Italy
    • Related Report
      2010 Annual Research Report
  • [Patent(Industrial Property Rights)] 細胞膜上分子と相互作用する化合物の検出方法2010

    • Inventor(s)
      本家孝一、小谷典弘
    • Industrial Property Rights Holder
      高知大学
    • Industrial Property Number
      2010-157181
    • Filing Date
      2010-07-09
    • Related Report
      2011 Final Research Report 2010 Annual Research Report

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Published: 2010-08-23   Modified: 2016-04-21  

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