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An electron microscopic study of actin nucleation factors

Research Project

Project/Area Number 22770145
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeSingle-year Grants
Research Field Biophysics
Research InstitutionNagoya University

Principal Investigator

NARITA Akihiro  名古屋大学, 理学研究科, 助教 (30360613)

Project Period (FY) 2010 – 2011
Project Status Completed (Fiscal Year 2011)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2011: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2010: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywordsアクチン / 電子顕微鏡 / 電子線トモグラフィー / 細胞骨格 / 画像解析 / Arp2/3複合体 / フォルミン / 三次元構造 / フィラメント極性 / 単粒子解析 / 重合核形成 / トレッドミリング
Research Abstract

The actin filament is responsible for a wide range of movement of the cell and dynamic through construction and destruction. Many proteins regulate the dynamics of the actin filament. Arp2/3 complex and formin are ones of the regulatory proteins and they start the construction of the actin filament in the cell. To understand mechanism of starting construction, we developed structural analysis procedures of the actin filament network in the cell with an Austrian group, which determined distribution and structure of Arp2/3 complex in the cell by using electron microscopy and image analysis. We also elucidated that formin binds only to the ends of the actin filament, not the side. Now we are analyzing data to conform the bound end to formin is the barbed end.

Report

(3 results)
  • 2011 Annual Research Report   Final Research Report ( PDF )
  • 2010 Annual Research Report
  • Research Products

    (46 results)

All 2012 2011 2010 Other

All Journal Article (8 results) (of which Peer Reviewed: 8 results) Presentation (37 results) Remarks (1 results)

  • [Journal Article] A novel actin-like filament structure from Clostridium tetani2012

    • Author(s)
      Popp, D., Narita, A., Lee, LJ., Ghoshdastider, U., Xue, B., Srinivasan, R., Balasubramanian, MK., Tanaka, T., Robinson, RC.
    • Journal Title

      J. Biol. Chem.

      Volume: (accepted)

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Direct determination of actin polarity in the cell2012

    • Author(s)
      Narita, A., Mueller, Jan., Vinzenz, M., Small, JV., Maeda, Y.
    • Journal Title

      Mol. Biol.

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Actin Branching in the initiation and maintenance of lamellipodia2012

    • Author(s)
      Vinzenz M
    • Journal Title

      J.Cell Science

      Volume: 125(11) Pages: 3775-85

    • DOI

      10.1242/jcs.107623

    • Related Report
      2011 Annual Research Report 2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Direct determination of actin polarity in the cell2012

    • Author(s)
      Narita Akihiro
    • Journal Title

      J.Mol.Biol.

      Volume: 419 Issue: 5 Pages: 359-68

    • DOI

      10.1016/j.jmb.2012.03.015

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Merits of the double-stranded form of the actin filament revealed by structures of the filament ends2011

    • Author(s)
      Narita A.
    • Journal Title

      Communicative and Integrative biology 4

      Volume: 4 Pages: 692-695

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Minimum requirements for the actin-like treadmilling motor system2011

    • Author(s)
      Narita A
    • Journal Title

      BioArchitecture

      Volume: 1 Pages: 205-208

    • Related Report
      2011 Final Research Report
    • Peer Reviewed
  • [Journal Article] Minimum requirements for the actin-like treadmilling motor system2011

    • Author(s)
      Narita A.
    • Journal Title

      BioArchitecture

      Volume: 1(5) Pages: 205-208

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Merits of the double-stranded form of the actin filament revealed by structures of the filament ends2011

    • Author(s)
      Narita A.
    • Journal Title

      Communicative and Integrative Biology

      Volume: 4(6) Pages: 692-695

    • Related Report
      2011 Annual Research Report
    • Peer Reviewed
  • [Presentation] 繊維状タンパク質複合体のための単粒子解析法2012

    • Author(s)
      成田哲博
    • Organizer
      顕微鏡学会生体構造解析分科会
    • Place of Presentation
      湯沢ニューオータニホテル
    • Year and Date
      2012-12-27
    • Related Report
      2011 Final Research Report
  • [Presentation] 分子と細胞をつなぐ線維状蛋白質構造解析2012

    • Author(s)
      成田哲博
    • Organizer
      第117回日本解剖学会総会・全国学術集会
    • Place of Presentation
      山梨大学(甲府市)
    • Year and Date
      2012-03-28
    • Related Report
      2011 Final Research Report
  • [Presentation] 分子と細胞をつなぐ線維状蛋白質構造解析2012

    • Author(s)
      成田哲博
    • Organizer
      第117回日本解剖学会総会・全国学術集会
    • Place of Presentation
      山梨大学(甲府市)(招待講演)
    • Year and Date
      2012-03-28
    • Related Report
      2011 Annual Research Report
  • [Presentation] Structural analysis of the actin filament in vitro and in vivo International Workshop" from Structure to Dynamics2012

    • Author(s)
      Narita A.
    • Place of Presentation
      名古屋大学(名古屋市)
    • Year and Date
      2012-03-17
    • Related Report
      2011 Final Research Report
  • [Presentation] Structural analysis of the actin filament in vitro and in vivo2012

    • Author(s)
      Narita A.
    • Organizer
      International Workshop "from Structure to Dynamics" for Our Understanding of Protein-Protein Interactions
    • Place of Presentation
      名古屋大学(名古屋市)
    • Year and Date
      2012-03-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] Spatial structure of cytoskeleton associated with nuclear membrane International Workshop "from Structure to Dynamics"2012

    • Author(s)
      Minakata S., Koike M., Narita A., Maeda Y., Usukura J.
    • Place of Presentation
      名古屋大学(名古屋市)
    • Year and Date
      2012-03-16
    • Related Report
      2011 Final Research Report
  • [Presentation] Supramolecular structural analysis by STEM electron tomography International Workshop "from Structure to Dynamics"2012

    • Author(s)
      Koike M., Minakata S. Narita A., Homma M., Usukura J., Maeda Y.
    • Place of Presentation
      名古屋大学(名古屋市)
    • Year and Date
      2012-03-16
    • Related Report
      2011 Final Research Report
  • [Presentation] New method for identify the ABP binding sites on the actin filament International Workshop "from Structure to Dynamics"2012

    • Author(s)
      Dai S., Narita A., Ito T., Akaoka K., Maeda Y.
    • Place of Presentation
      名古屋大学(名古屋市)
    • Year and Date
      2012-03-16
    • Related Report
      2011 Final Research Report
  • [Presentation] Spatial structure of cytoskeleton associated with nuclear membrane2012

    • Author(s)
      MinakataS., Koike M., Njirita A., Maeda Y., Usukura J.
    • Organizer
      International Workshop "from Structure to Dynamics" for Our Understanding of Protein-Protein Interactions
    • Place of Presentation
      名古屋大学(名古屋市)
    • Year and Date
      2012-03-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] Supramolecular structural analysis by STEM electron tomography2012

    • Author(s)
      Koike M., Minakata S.Narita A., Homma M., Usukura J., Maeda Y.
    • Organizer
      International Workshop "from Structure to Dynamics" for Our Understanding of Protein-Protein Interactions
    • Place of Presentation
      名古屋大学(名古屋市)
    • Year and Date
      2012-03-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] Two distinct mechanisms for actin capping protein regulation2012

    • Author(s)
      Takeda S., Minakata S., Koike R., Kawahata I., Narita A., Kitazawa M., Ota M., Yamakuni T., Maeda Y., Nitanai Y.
    • Organizer
      International Workshop "from Structure to Dynamics" for Our Understanding of Protein-Protein Interactions
    • Place of Presentation
      名古屋大学(名古屋市)
    • Year and Date
      2012-03-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] New method for identify the ABP binding sites on the actiti filament2012

    • Author(s)
      Dai S., Natita A., Ito T., Akaoka K., Maeda Y.
    • Organizer
      International Workshop "from Structure to Dynamics" for Our Understanding of Protein-Protein Interactions
    • Place of Presentation
      名古屋大学(名古屋市)
    • Year and Date
      2012-03-16
    • Related Report
      2011 Annual Research Report
  • [Presentation] Actin Polymerization correlates with the flattening of actin molecule 56th Annual meeting Biophysical Society2012

    • Author(s)
      Iwasa M., Maeda K., Narita A., Aihara T., Maeda Y., Oda T.
    • Place of Presentation
      San Diego Convention Center(San Diego)
    • Year and Date
      2012-02-27
    • Related Report
      2011 Final Research Report
  • [Presentation] Actin Polymerization correlates with the flattening of actin molecule2012

    • Author(s)
      Iwasa M., Maeda K., Narita A., Aihara T., Maeda Y., Oda T.
    • Organizer
      56th Annual meeting Biophysical Society
    • Place of Presentation
      San Diego Convention Center (San Diego)
    • Year and Date
      2012-02-27
    • Related Report
      2011 Annual Research Report
  • [Presentation] 大阪大学蛋白質研究所セミナー2012

    • Author(s)
      成田哲博
    • Organizer
      大阪大学蛋白質研究所セミナー
    • Place of Presentation
      大阪大学蛋白質研究所
    • Year and Date
      2012-02-17
    • Related Report
      2011 Final Research Report
  • [Presentation] Structural analysis of the actin filament network in the cell Direction of future in biological electron microscopy2012

    • Author(s)
      Narita A.
    • Place of Presentation
      東京大学(文京区)
    • Year and Date
      2012-02-17
    • Related Report
      2011 Final Research Report
  • [Presentation] Structural analysis of the actin filament network in the cell2012

    • Author(s)
      Narita A.
    • Organizer
      Direction of future in biological electron microscopy
    • Place of Presentation
      東京大学(文京区)(招待講演)
    • Year and Date
      2012-02-17
    • Related Report
      2011 Annual Research Report
  • [Presentation] Structural analysis of Na^+driven flagellar motor embedded in the membrane of Vibrio alginolyticus by electron tomography2012

    • Author(s)
      Koike M., Narita A., Homma M., Maeda Y.
    • Organizer
      Sensory Transduction in Microorganisms at Grordon Research Conference
    • Place of Presentation
      Ventura Beach Marriott(Ventura)
    • Year and Date
      2012-01-18
    • Related Report
      2011 Annual Research Report
  • [Presentation] Structural analysis of the actin filament in vivo and in vitro Joint Seminar Centre for BioImaging Sciences-Structural biology division of Japan EM2012

    • Author(s)
      Narita A.
    • Place of Presentation
      シンガポール国立大学(Singapore)
    • Year and Date
      2012-01-12
    • Related Report
      2011 Final Research Report
  • [Presentation] Structural analysis of the actin filament in vivo and in vitro2012

    • Author(s)
      Narita A.
    • Organizer
      Joint Seminar Centre for BioImaging Sciences-Structural biologydivision of Japan EM
    • Place of Presentation
      シンガポール国立大学(Singapore)(招待講演)
    • Year and Date
      2012-01-12
    • Related Report
      2011 Annual Research Report
  • [Presentation] 分子から細胞までをつなぐ繊維状蛋白質複合体構造解析2011

    • Author(s)
      成田哲博
    • Organizer
      第2回神経科学と構造生物学の融合
    • Place of Presentation
      岡崎コンファレンスセンター(岡崎市)
    • Year and Date
      2011-11-22
    • Related Report
      2011 Final Research Report
  • [Presentation] 分子から細胞までをつなぐ繊維状蛋白質複合体構造解析2011

    • Author(s)
      成田哲博
    • Organizer
      第2回神経科学と構造生物学の融合
    • Place of Presentation
      岡崎コンファレンスセンター(岡崎市)(招待講演)
    • Year and Date
      2011-11-22
    • Related Report
      2011 Annual Research Report
  • [Presentation] Two distinct mechanisms for actin capping protein regulation EMBO Lecture Courese The 26th2011

    • Author(s)
      Takeda S., Minakata S., Koike R., Kawahata I., Narita A., Kitazawa M., Ota M., Yamakuni T., Maeda Y., Nitanai Y.
    • Organizer
      European Cytoskeletal Forum Meeting "Actin-Based Motility
    • Place of Presentation
      Hotel Palma(Stresa,-Lake Maggiore)
    • Year and Date
      2011-10-30
    • Related Report
      2011 Final Research Report
  • [Presentation] Narita A High-Resolution structural determination of the cofilin-decorated actin filament by single-particle analysis of cryo-electron micrographs EMBO Lecture Courese The 26th2011

    • Author(s)
      Tanaka K., Kimura-Sakiyama C., Dai Shuheng., Maeda Y.
    • Organizer
      European Cytoskeletal Forum Meeting "Actin-Based Motility
    • Place of Presentation
      Hotel Palma(Stresa,-Lake Maggiore)
    • Year and Date
      2011-10-30
    • Related Report
      2011 Final Research Report
  • [Presentation] Two distinct mechanisms for actin capping protein regulation2011

    • Author(s)
      Takeda S., Minakata S., Koike R., Kawahata I., Narita A., Kitazawa M., Ota M., Yamakuni T., Maeda Y., Nitanai Y.
    • Organizer
      EMBO Lecture Courese The 26th.European Cytoskeletal Forum Meeting "Actin-Based Motility"
    • Place of Presentation
      Hotel Palma (Stresa,-Lake Maggiore)
    • Year and Date
      2011-10-30
    • Related Report
      2011 Annual Research Report
  • [Presentation] High-Resolution structural determination of the cofilin-decorated actin filament by single-particle analysis of cryo-electron micrographs2011

    • Author(s)
      Tanaka K., Kimura-Sakiyama C., Dai Shuheng., Maeda Y., Narita A
    • Organizer
      EMBO Lecture Courese The 26th.European Cytoskeletal Forum Meeting "Actin-Based Motility"
    • Place of Presentation
      Hotel Palma(Stresa,-Lake Maggiore)
    • Year and Date
      2011-10-30
    • Related Report
      2011 Annual Research Report
  • [Presentation] Visualization of Vibrio Na+-driven flagellar motor structure embedded in cell membrane2011

    • Author(s)
      Koike M., Narita A., Honma M., Maeda Y.
    • Organizer
      第49回日本生物物理学会
    • Place of Presentation
      兵庫県立大学(姫路市)
    • Year and Date
      2011-09-18
    • Related Report
      2011 Final Research Report
  • [Presentation] High-resolution structural determination of the cofilin-decorated actin filament by single-particle analysis of cryo-electron micrographs2011

    • Author(s)
      Tanaka K., Kimura-Sakiyama C., Dai Shuheng., Maeda Y., Narita A.
    • Organizer
      第49回日本生物物理学会
    • Place of Presentation
      兵庫県立大学(姫路市)
    • Year and Date
      2011-09-18
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] Visualization of Vibrio Na^+-driven flagellar motor structure embedded in cell membrane by electron microscopy2011

    • Author(s)
      Koike M., Narita A., Honma M., Maeda Y.
    • Organizer
      第49回日本生物物理学会
    • Place of Presentation
      兵庫県立大学(姫路市)
    • Year and Date
      2011-09-18
    • Related Report
      2011 Annual Research Report
  • [Presentation] A structural analysis of actin cytoskeleton in the cell2011

    • Author(s)
      Narita A., Muller J., Urban E., Vinzenz M., Small J V., Maeda Y.
    • Organizer
      第49回日本生物物理学会
    • Place of Presentation
      兵庫県立大学(姫路市)
    • Year and Date
      2011-09-16
    • Related Report
      2011 Annual Research Report 2011 Final Research Report
  • [Presentation] 細胞骨格のための単粒子解析法"Single particle analysis for cytoskeletal proteins2011

    • Author(s)
      成田哲博
    • Organizer
      第11回日本蛋白質科学会年会
    • Place of Presentation
      ホテル阪急エキスポパーク(吹田市)
    • Year and Date
      2011-06-07
    • Related Report
      2011 Final Research Report
  • [Presentation] 細胞骨格のための単粒子解析法"Single particle analysis for cytoskeletal proteins"2011

    • Author(s)
      成田哲博
    • Organizer
      第11回日本蛋白質科学会年会
    • Place of Presentation
      ホテル阪急エキスポパーク(吹田市)(招待講演)
    • Year and Date
      2011-06-07
    • Related Report
      2011 Annual Research Report
  • [Presentation] アクチン 原子レベルのメカニズム2011

    • Author(s)
      成田哲博
    • Organizer
      大阪大学蛋白質研究所セミナー
    • Place of Presentation
      大阪大学蛋白質研究所
    • Year and Date
      2011-02-17
    • Related Report
      2010 Annual Research Report
  • [Presentation] Structural analysis of Na+driven flagellar motor embedded in the membrane of Vibrio alginolyticus by electron tomography Sensory Transduction in Microorganisms at Grordon Research Conference2011

    • Author(s)
      Koike M., Narita A., Homma M., Maeda Y.
    • Related Report
      2011 Final Research Report
  • [Presentation] 繊維状タンパク質複合体のための単粒子解析法2010

    • Author(s)
      成田哲博
    • Organizer
      生体構造解析分科会
    • Place of Presentation
      湯沢ニューオータニホテル
    • Year and Date
      2010-12-27
    • Related Report
      2010 Annual Research Report
  • [Presentation] Single particle analysis for actin filaments and other cytoskeletal filaments 2010年顕微鏡学会2010

    • Author(s)
      成田哲博
    • Organizer
      アジア若手シンポジウム
    • Place of Presentation
      名古屋国際会議場
    • Year and Date
      2010-05-23
    • Related Report
      2011 Final Research Report
  • [Presentation] Single particle analysis for actin filaments and other cytoskeletal filaments2010

    • Author(s)
      成田哲博
    • Organizer
      2010年顕微鏡学会 アジア若手シンポジウム
    • Place of Presentation
      名古屋国際会議場
    • Year and Date
      2010-05-23
    • Related Report
      2010 Annual Research Report
  • [Remarks]

    • URL

      http://str.bio.nagoya-u.ac.jp:8080/Plone

    • Related Report
      2011 Final Research Report

URL: 

Published: 2010-08-23   Modified: 2016-04-21  

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